RNA–Protein interactions for RNA: YCR018C

SRD1, Protein involved in the processing of pre-rRNA to mature rRNA, yeastyeast

Gene SRD1, Length 666 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SRD1YCR018C DCW1P36091 449 aa7.5□□□□□ -1.21
SRD1YCR018C PTC4P38089 393 aa7.5□□□□□ -1.21
SRD1YCR018C RCR1P38212 213 aa7.5□□□□□ -1.21
SRD1YCR018C YEL023CP39992 682 aa7.49□□□□□ -1.21
SRD1YCR018C MGA2P40578 1113 aa7.49□□□□□ -1.21
SRD1YCR018C XDJ1P39102 459 aa7.45□□□□□ -1.22
SRD1YCR018C VRP1P37370 817 aa7.44□□□□□ -1.22
SRD1YCR018C YDR344CQ05510 147 aa7.41□□□□□ -1.22
SRD1YCR018C ELP4Q02884 456 aaKnown RBP7.36□□□□□ -1.23
SRD1YCR018C PML39Q03760 334 aa7.36□□□□□ -1.23
SRD1YCR018C DPS1P04802 557 aaKnown RBP7.33□□□□□ -1.24
SRD1YCR018C GRE2Q12068 342 aaKnown RBP7.3□□□□□ -1.24
SRD1YCR018C ARH1P48360 493 aa7.26□□□□□ -1.25
SRD1YCR018C MID1P41821 548 aa7.23□□□□□ -1.25
SRD1YCR018C RGA2Q06407 1009 aa7.22□□□□□ -1.25
SRD1YCR018C ATH1P48016 1211 aa7.21□□□□□ -1.26
SRD1YCR018C GUT1P32190 709 aa7.2□□□□□ -1.26
SRD1YCR018C MIF2P35201 549 aa7.19□□□□□ -1.26
SRD1YCR018C SPT23P35210 1082 aa7.19□□□□□ -1.26
SRD1YCR018C NST1P53935 1240 aa7.18□□□□□ -1.26
SRD1YCR018C PTC3P34221 468 aaKnown RBP7.17□□□□□ -1.26
SRD1YCR018C SRC1Q03707 834 aa7.17□□□□□ -1.26
SRD1YCR018C EDS1P38073 919 aa7.16□□□□□ -1.26
SRD1YCR018C PEX29Q03370 554 aa7.14□□□□□ -1.27
SRD1YCR018C MAK11P20484 414 aaKnown RBP7.12□□□□□ -1.27
SRD1YCR018C SOL3P38858 249 aa7.12□□□□□ -1.27
SRD1YCR018C HAP5Q02516 242 aa7.11□□□□□ -1.27
SRD1YCR018C AI4P03878 556 aa7.09□□□□□ -1.27
SRD1YCR018C MPH3P0CE00 602 aa7.09□□□□□ -1.27
SRD1YCR018C RGA1P39083 1007 aa7.09□□□□□ -1.27
SRD1YCR018C BNI4P53858 892 aa7.07□□□□□ -1.28
SRD1YCR018C YML082WQ04533 649 aaKnown RBP7.07□□□□□ -1.28
SRD1YCR018C RAM2P29703 316 aa7.06□□□□□ -1.28
SRD1YCR018C PTC2P39966 464 aaKnown RBP7.06□□□□□ -1.28
SRD1YCR018C ILV3P39522 585 aaKnown RBP7.05□□□□□ -1.28
SRD1YCR018C COQ8P27697 501 aa7.02□□□□□ -1.29
SRD1YCR018C RQC2Q12532 1038 aaKnown RBP7.02□□□□□ -1.29
SRD1YCR018C MPC54Q08550 464 aa7.01□□□□□ -1.29
SRD1YCR018C RAS1P01119 309 aa6.98□□□□□ -1.29
SRD1YCR018C NMA111P53920 997 aa6.97□□□□□ -1.29
SRD1YCR018C YGR273CP53329 174 aa6.94□□□□□ -1.3
SRD1YCR018C SLI15P38283 698 aa6.9□□□□□ -1.3
SRD1YCR018C DPL1Q05567 589 aa6.9□□□□□ -1.3
SRD1YCR018C YPR015CQ12531 247 aa6.9□□□□□ -1.3
SRD1YCR018C RAM1P22007 431 aa6.85□□□□□ -1.31
SRD1YCR018C NOP53Q12080 455 aaKnown RBP6.85□□□□□ -1.31
SRD1YCR018C TRK1P12685 1235 aa6.84□□□□□ -1.31
SRD1YCR018C AMS1P22855 1083 aa6.83□□□□□ -1.32
SRD1YCR018C GYP1Q08484 637 aa6.82□□□□□ -1.32
SRD1YCR018C ISU2Q12056 156 aa6.81□□□□□ -1.32
SRD1YCR018C KEX1P09620 729 aa6.75□□□□□ -1.33
SRD1YCR018C SDH2P21801 266 aa6.75□□□□□ -1.33
SRD1YCR018C CDC73Q06697 393 aa6.74□□□□□ -1.33
SRD1YCR018C PDR1P12383 1068 aa6.73□□□□□ -1.33
SRD1YCR018C SAS4Q04003 481 aa6.73□□□□□ -1.33
SRD1YCR018C YPL062WQ02781 134 aa6.7□□□□□ -1.34
SRD1YCR018C YEL077CQ3E7X8 1277 aa6.68□□□□□ -1.34
SRD1YCR018C YLR326WQ06170 240 aaKnown RBP6.64□□□□□ -1.35
SRD1YCR018C MRF1P30775 413 aaPredicted RBP6.62□□□□□ -1.35
SRD1YCR018C UBP14P38237 781 aaKnown RBP6.62□□□□□ -1.35
SRD1YCR018C DMA1P38823 416 aa6.6□□□□□ -1.35
SRD1YCR018C PCS60P38137 543 aaKnown RBP RIP-Chip data6.59□□□□□ -1.35not detected
SRD1YCR018C VHR2P40041 505 aa6.59□□□□□ -1.35
SRD1YCR018C BUD20Q08004 166 aaPredicted RBP6.58□□□□□ -1.36
SRD1YCR018C RAD54P32863 898 aa6.56□□□□□ -1.36
SRD1YCR018C BRE2P43132 505 aa6.56□□□□□ -1.36
SRD1YCR018C PRT1P06103 763 aaKnown RBP6.55□□□□□ -1.36
SRD1YCR018C RPP1BP10622 106 aaKnown RBP6.55□□□□□ -1.36
SRD1YCR018C GAR1P28007 205 aaKnown RBP6.55□□□□□ -1.36
SRD1YCR018C AIR1P40507 360 aaKnown RBP6.54□□□□□ -1.36
SRD1YCR018C ERG12P07277 443 aa6.52□□□□□ -1.37
SRD1YCR018C GCR2Q01722 534 aa6.52□□□□□ -1.37
SRD1YCR018C YRR1Q12172 810 aa6.52□□□□□ -1.37
SRD1YCR018C GBP2P25555 427 aaKnown RBP RIP-Chip data6.51□□□□□ -1.37not detected
SRD1YCR018C STR2P47164 639 aa6.51□□□□□ -1.37
SRD1YCR018C CLA4P48562 842 aa6.51□□□□□ -1.37
SRD1YCR018C ISM1P48526 1002 aa6.5□□□□□ -1.37
SRD1YCR018C SET1P38827 1080 aaKnown RBP6.49□□□□□ -1.37
SRD1YCR018C CST6P40535 587 aa6.49□□□□□ -1.37
SRD1YCR018C PEX21P50091 288 aa6.47□□□□□ -1.37
SRD1YCR018C NUD1P32336 851 aa6.44□□□□□ -1.38
SRD1YCR018C YDR090CQ03193 310 aa6.44□□□□□ -1.38
SRD1YCR018C LAM6Q08001 693 aa6.44□□□□□ -1.38
SRD1YCR018C GAP1P19145 602 aaPredicted RBP6.43□□□□□ -1.38
SRD1YCR018C TUM1Q08686 304 aaKnown RBP6.42□□□□□ -1.38
SRD1YCR018C CSC1Q06538 782 aa6.41□□□□□ -1.38
SRD1YCR018C TFB4Q12004 338 aa6.41□□□□□ -1.38
SRD1YCR018C MET22P32179 357 aa6.4□□□□□ -1.38
SRD1YCR018C KIC1P38692 1080 aa6.4□□□□□ -1.38
SRD1YCR018C TY1A-DR4O74302 440 aa6.39□□□□□ -1.39
SRD1YCR018C CDC4P07834 779 aa6.39□□□□□ -1.39
SRD1YCR018C TY1A-HP0C2I4 478 aaKnown RBP6.39□□□□□ -1.39
SRD1YCR018C TY1A-AP0CX57 440 aa6.39□□□□□ -1.39
SRD1YCR018C TY1A-PR1P0CX58 440 aa6.39□□□□□ -1.39
SRD1YCR018C TY1A-ORP0CX59 440 aa6.39□□□□□ -1.39
SRD1YCR018C TY1A-PR2P0CX60 440 aa6.39□□□□□ -1.39
SRD1YCR018C TY1A-DR5P0CX65 440 aa6.39□□□□□ -1.39
SRD1YCR018C TY1A-ER2P0CX66 440 aa6.39□□□□□ -1.39
SRD1YCR018C TY1A-GR3P0CX67 440 aa6.39□□□□□ -1.39
SRD1YCR018C TY1A-LR1P0CX68 440 aa6.39□□□□□ -1.39
Retrieved 100 of 5,963 RNA–protein pairs in 14.3 ms