RNA–Protein interactions for RNA: YCL059C

KRR1, Transcript of Nucleolar protein required for rRNA synthesis and ribosomal assembly, yeastyeast

Gene KRR1, Length 951 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
KRR1YCL059C TY1B-PR2P0C2J0 1756 aa11.37□□□□□ -0.59
KRR1YCL059C TY1B-PR3P0C2J1 1755 aaKnown RBP11.37□□□□□ -0.59
KRR1YCL059C TY1B-JR1P47098 1755 aa11.37□□□□□ -0.59
KRR1YCL059C TY1B-ML2Q03434 1755 aaKnown RBP11.37□□□□□ -0.59
KRR1YCL059C TY1B-ER1Q03612 1755 aa11.37□□□□□ -0.59
KRR1YCL059C TY1B-ML1Q04711 1755 aaKnown RBP11.37□□□□□ -0.59
KRR1YCL059C TY1B-GR2Q12269 1755 aa11.37□□□□□ -0.59
KRR1YCL059C TY1B-OLQ12273 1755 aa11.37□□□□□ -0.59
KRR1YCL059C TY1B-PLQ12414 1755 aaKnown RBP11.37□□□□□ -0.59
KRR1YCL059C TY1B-BRQ12193 1756 aa11.36□□□□□ -0.59
KRR1YCL059C TY1B-GR3Q12316 1755 aa11.36□□□□□ -0.59
KRR1YCL059C TY1B-ORQ92393 1755 aa11.36□□□□□ -0.59
KRR1YCL059C NUP159P40477 1460 aa11.33□□□□□ -0.6
KRR1YCL059C NUP157P40064 1391 aaKnown RBP11.32□□□□□ -0.6
KRR1YCL059C TY3B-GQ99315 1547 aa11.31□□□□□ -0.6
KRR1YCL059C MMS1Q06211 1407 aa11.29□□□□□ -0.6
KRR1YCL059C ESC1Q03661 1658 aaKnown RBP11.28□□□□□ -0.6
KRR1YCL059C SCT1P32784 759 aa11.27□□□□□ -0.61
KRR1YCL059C ORC1P54784 914 aaPredicted RBP11.27□□□□□ -0.61
KRR1YCL059C BFR2Q06631 534 aaKnown RBP11.27□□□□□ -0.61
KRR1YCL059C DNF1P32660 1571 aa11.26□□□□□ -0.61
KRR1YCL059C SPT7P35177 1332 aa11.26□□□□□ -0.61
KRR1YCL059C IRC20Q06554 1556 aa11.22□□□□□ -0.61
KRR1YCL059C TY1B-JR2P47100 1755 aaKnown RBP11.21□□□□□ -0.61
KRR1YCL059C TY1B-ER2Q03619 1755 aa11.21□□□□□ -0.61
KRR1YCL059C TY1B-MR1Q04214 1755 aa11.21□□□□□ -0.61
KRR1YCL059C TY1B-MR2Q04670 1755 aaKnown RBP11.21□□□□□ -0.61
KRR1YCL059C TY1B-LR1Q12088 1755 aaKnown RBP11.21□□□□□ -0.61
KRR1YCL059C TY1B-NL1Q12112 1755 aa11.21□□□□□ -0.61
KRR1YCL059C TY1B-GR1Q12141 1755 aa11.21□□□□□ -0.61
KRR1YCL059C TY1B-BLQ12490 1755 aa11.21□□□□□ -0.61
KRR1YCL059C GDB1Q06625 1536 aa11.21□□□□□ -0.61
KRR1YCL059C LEU3P08638 886 aa11.2□□□□□ -0.62
KRR1YCL059C NTE1Q04958 1679 aa11.19□□□□□ -0.62
KRR1YCL059C PDR10P51533 1564 aa11.19□□□□□ -0.62
KRR1YCL059C RPA190P10964 1664 aaKnown RBP11.18□□□□□ -0.62
KRR1YCL059C BNR1P40450 1375 aa11.17□□□□□ -0.62
KRR1YCL059C RPO21P04050 1733 aaKnown RBP11.17□□□□□ -0.62
KRR1YCL059C YBT1P32386 1661 aa11.17□□□□□ -0.62
KRR1YCL059C ARO1P08566 1588 aaKnown RBP11.16□□□□□ -0.62
KRR1YCL059C MET5P47169 1442 aa11.15□□□□□ -0.62
KRR1YCL059C PDR12Q02785 1511 aa11.14□□□□□ -0.63
KRR1YCL059C MHP1P43638 1398 aa11.11□□□□□ -0.63
KRR1YCL059C YSP2Q06681 1438 aa11.1□□□□□ -0.63
KRR1YCL059C GCN2P15442 1659 aa11.09□□□□□ -0.63
KRR1YCL059C ESL2P36168 1195 aa11.09□□□□□ -0.63
KRR1YCL059C TAF5P38129 798 aa11.09□□□□□ -0.63
KRR1YCL059C IQG1Q12280 1495 aa11.08□□□□□ -0.64
KRR1YCL059C PSD2P53037 1138 aaKnown RBP11.07□□□□□ -0.64
KRR1YCL059C BUD3P25558 1636 aa11.06□□□□□ -0.64
KRR1YCL059C PDS5Q04264 1277 aa11.05□□□□□ -0.64
KRR1YCL059C URN1Q06525 465 aaKnown RBP11.05□□□□□ -0.64
KRR1YCL059C FAP1P53971 965 aa11.04□□□□□ -0.64
KRR1YCL059C SPO14P36126 1683 aa11.04□□□□□ -0.64
KRR1YCL059C KIP3P53086 805 aaKnown RBP11.03□□□□□ -0.64
KRR1YCL059C RTC1Q08281 1341 aa11.01□□□□□ -0.65
KRR1YCL059C NAP1P25293 417 aaKnown RBP11□□□□□ -0.65
KRR1YCL059C RAV1P47104 1357 aa10.98□□□□□ -0.65
KRR1YCL059C LTE1P07866 1435 aa10.97□□□□□ -0.65
KRR1YCL059C PRS1P32895 427 aaKnown RBP10.96□□□□□ -0.65
KRR1YCL059C DRS2P39524 1355 aa10.94□□□□□ -0.66
KRR1YCL059C SPE2P21182 396 aa10.9□□□□□ -0.66
KRR1YCL059C PDR5P33302 1511 aaKnown RBP10.89□□□□□ -0.67
KRR1YCL059C YRF1-1P0CX20 1796 aa10.88□□□□□ -0.67
KRR1YCL059C YRF1-5P0CX21 1796 aa10.88□□□□□ -0.67
KRR1YCL059C YRF1-8P0CX22 1796 aa10.88□□□□□ -0.67
KRR1YCL059C TRM3Q07527 1436 aa10.87□□□□□ -0.67
KRR1YCL059C FPR3P38911 411 aaKnown RBP10.87□□□□□ -0.67
KRR1YCL059C CHZ1P40019 153 aaPredicted RBP10.85□□□□□ -0.67
KRR1YCL059C IPL1P38991 367 aa10.84□□□□□ -0.67
KRR1YCL059C TAF8Q03750 510 aa10.84□□□□□ -0.67
KRR1YCL059C TY3B-IQ7LHG5 1498 aaKnown RBP10.83□□□□□ -0.68
KRR1YCL059C YOR093CQ12275 1648 aa10.83□□□□□ -0.68
KRR1YCL059C TFA1P36100 482 aa10.82□□□□□ -0.68
KRR1YCL059C YLR419WQ06698 1435 aaKnown RBP10.82□□□□□ -0.68
KRR1YCL059C CDC45Q08032 650 aa10.81□□□□□ -0.68
KRR1YCL059C RPP0P05317 312 aaKnown RBP10.79□□□□□ -0.68
KRR1YCL059C ALD4P46367 519 aaKnown RBP10.79□□□□□ -0.68
KRR1YCL059C SEC7P11075 2009 aaKnown RBP10.79□□□□□ -0.68
KRR1YCL059C TYS1P36421 394 aaKnown RBP10.78□□□□□ -0.68
KRR1YCL059C RTG3P38165 486 aa10.78□□□□□ -0.68
KRR1YCL059C VPS27P40343 622 aaKnown RBP10.78□□□□□ -0.68
KRR1YCL059C MRX12P47084 519 aa10.78□□□□□ -0.68
KRR1YCL059C PDR11P40550 1411 aa10.77□□□□□ -0.68
KRR1YCL059C IML1P47170 1584 aa10.77□□□□□ -0.69
KRR1YCL059C VMR1P38735 1592 aa10.75□□□□□ -0.69
KRR1YCL059C CHC1P22137 1653 aaKnown RBP10.74□□□□□ -0.69
KRR1YCL059C YAP3P38749 330 aa10.74□□□□□ -0.69
KRR1YCL059C ITT1Q04638 464 aa10.74□□□□□ -0.69
KRR1YCL059C CAB1Q04430 367 aa10.73□□□□□ -0.69
KRR1YCL059C NST1P53935 1240 aa10.71□□□□□ -0.69
KRR1YCL059C YDL144CQ07589 356 aa10.71□□□□□ -0.69
KRR1YCL059C RAD9P14737 1309 aa10.7□□□□□ -0.7
KRR1YCL059C FKH1P40466 484 aa10.7□□□□□ -0.7
KRR1YCL059C FUN12P39730 1002 aaKnown RBP10.69□□□□□ -0.7
KRR1YCL059C YRB30P53107 440 aaPredicted RBP10.69□□□□□ -0.7
KRR1YCL059C NUP188P52593 1655 aaKnown RBP10.67□□□□□ -0.7
KRR1YCL059C DOP1Q03921 1698 aa10.67□□□□□ -0.7
KRR1YCL059C RVB2Q12464 471 aaKnown RBP10.67□□□□□ -0.7
KRR1YCL059C KAR2P16474 682 aaKnown RBP10.65□□□□□ -0.7
Retrieved 100 of 5,963 RNA–protein pairs in 9.9 ms