RNA–Protein interactions for RNA: YCL055W

KAR4, Transcript of Transcription factor required for response to pheromones, yeastyeast

Gene KAR4, Length 1,008 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
KAR4YCL055W BCK2P33306 851 aa9.03□□□□□ -0.96
KAR4YCL055W DCW1P36091 449 aa9.01□□□□□ -0.97
KAR4YCL055W PTC4P38089 393 aa9□□□□□ -0.97
KAR4YCL055W YEL023CP39992 682 aa8.99□□□□□ -0.97
KAR4YCL055W PRE3P38624 215 aa8.98□□□□□ -0.97
KAR4YCL055W GRE2Q12068 342 aaKnown RBP8.87□□□□□ -0.99
KAR4YCL055W PML39Q03760 334 aa8.82□□□□□ -1
KAR4YCL055W VRP1P37370 817 aa8.8□□□□□ -1
KAR4YCL055W XDJ1P39102 459 aa8.79□□□□□ -1
KAR4YCL055W MIF2P35201 549 aa8.78□□□□□ -1
KAR4YCL055W ELP4Q02884 456 aaKnown RBP8.78□□□□□ -1
KAR4YCL055W YDR344CQ05510 147 aa8.77□□□□□ -1.01
KAR4YCL055W ATH1P48016 1211 aa8.76□□□□□ -1.01
KAR4YCL055W MAK11P20484 414 aaKnown RBP8.75□□□□□ -1.01
KAR4YCL055W GUT1P32190 709 aa8.75□□□□□ -1.01
KAR4YCL055W PTC3P34221 468 aaKnown RBP8.73□□□□□ -1.01
KAR4YCL055W EDS1P38073 919 aa8.71□□□□□ -1.02
KAR4YCL055W ARH1P48360 493 aa8.7□□□□□ -1.02
KAR4YCL055W RAM2P29703 316 aa8.68□□□□□ -1.02
KAR4YCL055W MID1P41821 548 aa8.66□□□□□ -1.02
KAR4YCL055W NST1P53935 1240 aa8.66□□□□□ -1.02
KAR4YCL055W DPS1P04802 557 aaKnown RBP8.64□□□□□ -1.03
KAR4YCL055W PEX29Q03370 554 aa8.63□□□□□ -1.03
KAR4YCL055W COQ8P27697 501 aa8.62□□□□□ -1.03
KAR4YCL055W SPT23P35210 1082 aa8.61□□□□□ -1.03
KAR4YCL055W AI4P03878 556 aa8.6□□□□□ -1.03
KAR4YCL055W MPH3P0CE00 602 aa8.6□□□□□ -1.03
KAR4YCL055W SOL3P38858 249 aa8.6□□□□□ -1.03
KAR4YCL055W HAP5Q02516 242 aa8.55□□□□□ -1.04
KAR4YCL055W ILV3P39522 585 aaKnown RBP8.51□□□□□ -1.05
KAR4YCL055W BNI4P53858 892 aa8.51□□□□□ -1.05
KAR4YCL055W NOP53Q12080 455 aaKnown RBP8.48□□□□□ -1.05
KAR4YCL055W PTC2P39966 464 aaKnown RBP8.47□□□□□ -1.05
KAR4YCL055W YGR273CP53329 174 aa8.47□□□□□ -1.05
KAR4YCL055W YML082WQ04533 649 aaKnown RBP8.47□□□□□ -1.05
KAR4YCL055W MPC54Q08550 464 aa8.46□□□□□ -1.06
KAR4YCL055W SRC1Q03707 834 aa8.41□□□□□ -1.06
KAR4YCL055W NMA111P53920 997 aa8.4□□□□□ -1.06
KAR4YCL055W SLI15P38283 698 aa8.37□□□□□ -1.07
KAR4YCL055W DPL1Q05567 589 aa8.36□□□□□ -1.07
KAR4YCL055W YPR015CQ12531 247 aa8.27□□□□□ -1.09
KAR4YCL055W RAS1P01119 309 aa8.26□□□□□ -1.09
KAR4YCL055W KEX1P09620 729 aa8.26□□□□□ -1.09
KAR4YCL055W ISU2Q12056 156 aa8.26□□□□□ -1.09
KAR4YCL055W RAM1P22007 431 aa8.23□□□□□ -1.09
KAR4YCL055W RGA2Q06407 1009 aa8.23□□□□□ -1.09
KAR4YCL055W GYP1Q08484 637 aa8.21□□□□□ -1.1
KAR4YCL055W RGA1P39083 1007 aa8.2□□□□□ -1.1
KAR4YCL055W CDC73Q06697 393 aa8.2□□□□□ -1.1
KAR4YCL055W AMS1P22855 1083 aa8.18□□□□□ -1.1
KAR4YCL055W TRK1P12685 1235 aa8.14□□□□□ -1.11
KAR4YCL055W YLR326WQ06170 240 aaKnown RBP8.14□□□□□ -1.11
KAR4YCL055W PDR1P12383 1068 aa8.13□□□□□ -1.11
KAR4YCL055W SAS4Q04003 481 aa8.13□□□□□ -1.11
KAR4YCL055W UBP14P38237 781 aaKnown RBP8.12□□□□□ -1.11
KAR4YCL055W SET1P38827 1080 aaKnown RBP8.12□□□□□ -1.11
KAR4YCL055W VHR2P40041 505 aa8.11□□□□□ -1.11
KAR4YCL055W RPP1BP10622 106 aaKnown RBP8.09□□□□□ -1.11
KAR4YCL055W PCS60P38137 543 aaKnown RBP RIP-Chip data8.09□□□□□ -1.11not detected
KAR4YCL055W RAD54P32863 898 aa8.08□□□□□ -1.12
KAR4YCL055W SDH2P21801 266 aa8.07□□□□□ -1.12
KAR4YCL055W YEL077CQ3E7X8 1277 aa8.05□□□□□ -1.12
KAR4YCL055W MRF1P30775 413 aaPredicted RBP8.01□□□□□ -1.13
KAR4YCL055W PRT1P06103 763 aaKnown RBP7.96□□□□□ -1.14
KAR4YCL055W PEX21P50091 288 aa7.96□□□□□ -1.14
KAR4YCL055W BUD20Q08004 166 aaPredicted RBP7.96□□□□□ -1.14
KAR4YCL055W KIC1P38692 1080 aa7.95□□□□□ -1.14
KAR4YCL055W YRR1Q12172 810 aa7.95□□□□□ -1.14
KAR4YCL055W YDR090CQ03193 310 aa7.94□□□□□ -1.14
KAR4YCL055W IFH1P39520 1085 aa7.91□□□□□ -1.14
KAR4YCL055W STR2P47164 639 aa7.91□□□□□ -1.14
KAR4YCL055W ERG12P07277 443 aa7.9□□□□□ -1.14
KAR4YCL055W CSC1Q06538 782 aa7.9□□□□□ -1.14
KAR4YCL055W TFB4Q12004 338 aa7.9□□□□□ -1.14
KAR4YCL055W GAP1P19145 602 aaPredicted RBP7.89□□□□□ -1.15
KAR4YCL055W ISM1P48526 1002 aa7.88□□□□□ -1.15
KAR4YCL055W NUD1P32336 851 aa7.87□□□□□ -1.15
KAR4YCL055W YPL062WQ02781 134 aa7.87□□□□□ -1.15
KAR4YCL055W TUM1Q08686 304 aaKnown RBP7.87□□□□□ -1.15
KAR4YCL055W NPL4P33755 580 aa7.85□□□□□ -1.15
KAR4YCL055W BRE2P43132 505 aa7.85□□□□□ -1.15
KAR4YCL055W AIR1P40507 360 aaKnown RBP7.82□□□□□ -1.16
KAR4YCL055W CST6P40535 587 aa7.82□□□□□ -1.16
KAR4YCL055W REF2P42073 533 aaPredicted RBP7.82□□□□□ -1.16
KAR4YCL055W GCR2Q01722 534 aa7.82□□□□□ -1.16
KAR4YCL055W SPT16P32558 1035 aaKnown RBP7.8□□□□□ -1.16
KAR4YCL055W GCD11P32481 527 aaKnown RBP7.79□□□□□ -1.16
KAR4YCL055W ORC6P38826 435 aa7.79□□□□□ -1.16
KAR4YCL055W CLA4P48562 842 aa7.78□□□□□ -1.16
KAR4YCL055W YPR148CQ06523 435 aa7.77□□□□□ -1.17
KAR4YCL055W LAM6Q08001 693 aa7.77□□□□□ -1.17
KAR4YCL055W TY1A-DR4O74302 440 aa7.76□□□□□ -1.17
KAR4YCL055W TY1A-HP0C2I4 478 aaKnown RBP7.76□□□□□ -1.17
KAR4YCL055W TY1A-AP0CX57 440 aa7.76□□□□□ -1.17
KAR4YCL055W TY1A-PR1P0CX58 440 aa7.76□□□□□ -1.17
KAR4YCL055W TY1A-ORP0CX59 440 aa7.76□□□□□ -1.17
KAR4YCL055W TY1A-PR2P0CX60 440 aa7.76□□□□□ -1.17
KAR4YCL055W TY1A-DR5P0CX65 440 aa7.76□□□□□ -1.17
KAR4YCL055W TY1A-ER2P0CX66 440 aa7.76□□□□□ -1.17
KAR4YCL055W TY1A-GR3P0CX67 440 aa7.76□□□□□ -1.17
Retrieved 100 of 5,963 RNA–protein pairs in 47.2 ms