RNA–Protein interactions for RNA: YCL051W

LRE1, Transcript of Protein involved in control of cell wall structure and stress response, yeast

Gene LRE1, Length 1,752 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
LRE1	YCL051W	TFA1	P36100	482 aa		5.67	□□□□□ -1.5
LRE1	YCL051W	RCR1	P38212	213 aa		5.65	□□□□□ -1.5
LRE1	YCL051W	YEL023C	P39992	682 aa		5.65	□□□□□ -1.5
LRE1	YCL051W	DCW1	P36091	449 aa		5.65	□□□□□ -1.51
LRE1	YCL051W	XDJ1	P39102	459 aa		5.65	□□□□□ -1.51
LRE1	YCL051W	MGA2	P40578	1113 aa		5.64	□□□□□ -1.51
LRE1	YCL051W	VRP1	P37370	817 aa		5.63	□□□□□ -1.51
LRE1	YCL051W	YDR344C	Q05510	147 aa		5.62	□□□□□ -1.51
LRE1	YCL051W	DPS1	P04802	557 aa	Known RBP	5.55	□□□□□ -1.52
LRE1	YCL051W	PML39	Q03760	334 aa		5.55	□□□□□ -1.52
LRE1	YCL051W	ELP4	Q02884	456 aa	Known RBP	5.55	□□□□□ -1.52
LRE1	YCL051W	RGA2	Q06407	1009 aa		5.54	□□□□□ -1.52
LRE1	YCL051W	ARH1	P48360	493 aa		5.5	□□□□□ -1.53
LRE1	YCL051W	GRE2	Q12068	342 aa	Known RBP	5.5	□□□□□ -1.53
LRE1	YCL051W	SRC1	Q03707	834 aa		5.47	□□□□□ -1.53
LRE1	YCL051W	MID1	P41821	548 aa		5.46	□□□□□ -1.54
LRE1	YCL051W	NST1	P53935	1240 aa		5.45	□□□□□ -1.54
LRE1	YCL051W	GUT1	P32190	709 aa		5.43	□□□□□ -1.54
LRE1	YCL051W	SPT23	P35210	1082 aa		5.43	□□□□□ -1.54
LRE1	YCL051W	RGA1	P39083	1007 aa		5.42	□□□□□ -1.54
LRE1	YCL051W	ATH1	P48016	1211 aa		5.42	□□□□□ -1.54
LRE1	YCL051W	PTC3	P34221	468 aa	Known RBP	5.41	□□□□□ -1.54
LRE1	YCL051W	EDS1	P38073	919 aa		5.4	□□□□□ -1.54
LRE1	YCL051W	MIF2	P35201	549 aa		5.39	□□□□□ -1.55
LRE1	YCL051W	SOL3	P38858	249 aa		5.39	□□□□□ -1.55
LRE1	YCL051W	HAP5	Q02516	242 aa		5.37	□□□□□ -1.55
LRE1	YCL051W	PEX29	Q03370	554 aa		5.37	□□□□□ -1.55
LRE1	YCL051W	MPH3	P0CE00	602 aa		5.37	□□□□□ -1.55
LRE1	YCL051W	MAK11	P20484	414 aa	Known RBP	5.37	□□□□□ -1.55
LRE1	YCL051W	AI4	P03878	556 aa		5.36	□□□□□ -1.55
LRE1	YCL051W	BNI4	P53858	892 aa		5.36	□□□□□ -1.55
LRE1	YCL051W	YML082W	Q04533	649 aa	Known RBP	5.36	□□□□□ -1.55
LRE1	YCL051W	ILV3	P39522	585 aa	Known RBP	5.34	□□□□□ -1.56
LRE1	YCL051W	RAM2	P29703	316 aa		5.32	□□□□□ -1.56
LRE1	YCL051W	PTC2	P39966	464 aa	Known RBP	5.32	□□□□□ -1.56
LRE1	YCL051W	MPC54	Q08550	464 aa		5.3	□□□□□ -1.56
LRE1	YCL051W	RAS1	P01119	309 aa		5.29	□□□□□ -1.56
LRE1	YCL051W	COQ8	P27697	501 aa		5.29	□□□□□ -1.56
LRE1	YCL051W	NMA111	P53920	997 aa		5.26	□□□□□ -1.57
LRE1	YCL051W	YGR273C	P53329	174 aa		5.24	□□□□□ -1.57
LRE1	YCL051W	YPR015C	Q12531	247 aa		5.23	□□□□□ -1.57
LRE1	YCL051W	SLI15	P38283	698 aa		5.21	□□□□□ -1.58
LRE1	YCL051W	RAM1	P22007	431 aa		5.2	□□□□□ -1.58
LRE1	YCL051W	DPL1	Q05567	589 aa		5.2	□□□□□ -1.58
LRE1	YCL051W	TRK1	P12685	1235 aa		5.19	□□□□□ -1.58
LRE1	YCL051W	NOP53	Q12080	455 aa	Known RBP	5.19	□□□□□ -1.58
LRE1	YCL051W	AMS1	P22855	1083 aa		5.17	□□□□□ -1.58
LRE1	YCL051W	GYP1	Q08484	637 aa		5.14	□□□□□ -1.59
LRE1	YCL051W	ISU2	Q12056	156 aa		5.14	□□□□□ -1.59
LRE1	YCL051W	SDH2	P21801	266 aa		5.13	□□□□□ -1.59
LRE1	YCL051W	YPL062W	Q02781	134 aa		5.1	□□□□□ -1.59
LRE1	YCL051W	KEX1	P09620	729 aa		5.09	□□□□□ -1.59
LRE1	YCL051W	SAS4	Q04003	481 aa		5.09	□□□□□ -1.6
LRE1	YCL051W	CDC73	Q06697	393 aa		5.09	□□□□□ -1.6
LRE1	YCL051W	PDR1	P12383	1068 aa		5.08	□□□□□ -1.6
LRE1	YCL051W	YEL077C	Q3E7X8	1277 aa		5.04	□□□□□ -1.6
LRE1	YCL051W	YLR326W	Q06170	240 aa	Known RBP	5	□□□□□ -1.61
LRE1	YCL051W	MRF1	P30775	413 aa	Predicted RBP	4.99	□□□□□ -1.61
LRE1	YCL051W	UBP14	P38237	781 aa	Known RBP	4.99	□□□□□ -1.61
LRE1	YCL051W	PCS60	P38137	543 aa	Known RBP RIP-Chip data	4.97	□□□□□ -1.61	RIP-Chip
LRE1	YCL051W	BRE2	P43132	505 aa		4.97	□□□□□ -1.61
LRE1	YCL051W	BUD20	Q08004	166 aa	Predicted RBP	4.97	□□□□□ -1.61
LRE1	YCL051W	PRT1	P06103	763 aa	Known RBP	4.95	□□□□□ -1.62
LRE1	YCL051W	VHR2	P40041	505 aa		4.94	□□□□□ -1.62
LRE1	YCL051W	AIR1	P40507	360 aa	Known RBP	4.94	□□□□□ -1.62
LRE1	YCL051W	GAR1	P28007	205 aa	Known RBP	4.93	□□□□□ -1.62
LRE1	YCL051W	RAD54	P32863	898 aa		4.93	□□□□□ -1.62
LRE1	YCL051W	RPP1B	P10622	106 aa	Known RBP	4.92	□□□□□ -1.62
LRE1	YCL051W	STR2	P47164	639 aa		4.92	□□□□□ -1.62
LRE1	YCL051W	CLA4	P48562	842 aa		4.92	□□□□□ -1.62
LRE1	YCL051W	GCR2	Q01722	534 aa		4.92	□□□□□ -1.62
LRE1	YCL051W	ERG12	P07277	443 aa		4.91	□□□□□ -1.62
LRE1	YCL051W	CST6	P40535	587 aa		4.91	□□□□□ -1.62
LRE1	YCL051W	GBP2	P25555	427 aa	Known RBP RIP-Chip data	4.9	□□□□□ -1.63	not detected
LRE1	YCL051W	YRR1	Q12172	810 aa		4.9	□□□□□ -1.63
LRE1	YCL051W	ISM1	P48526	1002 aa		4.89	□□□□□ -1.63
LRE1	YCL051W	LAM6	Q08001	693 aa		4.88	□□□□□ -1.63
LRE1	YCL051W	GAP1	P19145	602 aa	Predicted RBP	4.87	□□□□□ -1.63
LRE1	YCL051W	SET1	P38827	1080 aa	Known RBP	4.87	□□□□□ -1.63
LRE1	YCL051W	NUD1	P32336	851 aa		4.86	□□□□□ -1.63
LRE1	YCL051W	PEX21	P50091	288 aa		4.86	□□□□□ -1.63
LRE1	YCL051W	YDR090C	Q03193	310 aa		4.86	□□□□□ -1.63
LRE1	YCL051W	MET22	P32179	357 aa		4.84	□□□□□ -1.63
LRE1	YCL051W	TFB4	Q12004	338 aa		4.84	□□□□□ -1.63
LRE1	YCL051W	CDC4	P07834	779 aa		4.83	□□□□□ -1.64
LRE1	YCL051W	TY1A-DR4	O74302	440 aa		4.83	□□□□□ -1.64
LRE1	YCL051W	TY1A-H	P0C2I4	478 aa	Known RBP	4.83	□□□□□ -1.64
LRE1	YCL051W	TY1A-A	P0CX57	440 aa		4.83	□□□□□ -1.64
LRE1	YCL051W	TY1A-PR1	P0CX58	440 aa		4.83	□□□□□ -1.64
LRE1	YCL051W	TY1A-OR	P0CX59	440 aa		4.83	□□□□□ -1.64
LRE1	YCL051W	TY1A-PR2	P0CX60	440 aa		4.83	□□□□□ -1.64
LRE1	YCL051W	TY1A-DR5	P0CX65	440 aa		4.83	□□□□□ -1.64
LRE1	YCL051W	TY1A-ER2	P0CX66	440 aa		4.83	□□□□□ -1.64
LRE1	YCL051W	TY1A-GR3	P0CX67	440 aa		4.83	□□□□□ -1.64
LRE1	YCL051W	TY1A-LR1	P0CX68	440 aa		4.83	□□□□□ -1.64
LRE1	YCL051W	TY1A-MR2	P0CX69	440 aa		4.83	□□□□□ -1.64
LRE1	YCL051W	TY1A-JR2	P47099	440 aa		4.83	□□□□□ -1.64
LRE1	YCL051W	TY1A-DR1	Q03856	440 aa		4.83	□□□□□ -1.64
LRE1	YCL051W	TY1A-ML1	Q04706	440 aa	Known RBP	4.83	□□□□□ -1.64
LRE1	YCL051W	CSC1	Q06538	782 aa		4.83	□□□□□ -1.64

Retrieved 100 of 5,963 RNA–protein pairs in 38.2 ms