RNA–Protein interactions for RNA: YBR023C

CHS3, Transcript of Chitin synthase III, yeast

Gene CHS3, Length 3,498 nt, Biotype protein coding, Subcellular localisation Mitochondria .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
CHS3	YBR023C	TY1B-BR	Q12193	1756 aa		4.78	□□□□□ -1.64
CHS3	YBR023C	TY1B-GR3	Q12316	1755 aa		4.78	□□□□□ -1.64
CHS3	YBR023C	TY1B-OR	Q92393	1755 aa		4.78	□□□□□ -1.64
CHS3	YBR023C	ATF2	P53296	535 aa		4.78	□□□□□ -1.64
CHS3	YBR023C	SSA1	P10591	642 aa	Known RBP	4.77	□□□□□ -1.65
CHS3	YBR023C	YJL007C	P47080	104 aa		4.77	□□□□□ -1.65
CHS3	YBR023C	MET10	P39692	1035 aa		4.77	□□□□□ -1.65
CHS3	YBR023C	ORC1	P54784	914 aa	Predicted RBP	4.77	□□□□□ -1.65
CHS3	YBR023C	TFB3	Q03290	321 aa		4.77	□□□□□ -1.65
CHS3	YBR023C	CDC25	P04821	1589 aa		4.76	□□□□□ -1.65
CHS3	YBR023C	DIT2	P21595	489 aa		4.76	□□□□□ -1.65
CHS3	YBR023C	PKC1	P24583	1151 aa		4.76	□□□□□ -1.65
CHS3	YBR023C	GEF1	P37020	779 aa		4.75	□□□□□ -1.65
CHS3	YBR023C	MET5	P47169	1442 aa		4.75	□□□□□ -1.65
CHS3	YBR023C	CHD1	P32657	1468 aa		4.74	□□□□□ -1.65
CHS3	YBR023C	AI2	P03876	854 aa		4.74	□□□□□ -1.65
CHS3	YBR023C	DNF1	P32660	1571 aa		4.74	□□□□□ -1.65
CHS3	YBR023C	MRM1	P25270	412 aa		4.74	□□□□□ -1.65
CHS3	YBR023C	TY1B-H	O13535	1793 aa		4.74	□□□□□ -1.65
CHS3	YBR023C	TY1B-DR5	P0C2I2	1755 aa		4.74	□□□□□ -1.65
CHS3	YBR023C	TY1B-DR6	P0C2I3	1755 aa		4.74	□□□□□ -1.65
CHS3	YBR023C	TY1B-LR2	P0C2I5	1755 aa		4.74	□□□□□ -1.65
CHS3	YBR023C	TY1B-LR3	P0C2I6	1755 aa	Known RBP	4.74	□□□□□ -1.65
CHS3	YBR023C	TY1B-PR1	P0C2I9	1755 aa	Known RBP	4.74	□□□□□ -1.65
CHS3	YBR023C	TY1B-PR2	P0C2J0	1756 aa		4.74	□□□□□ -1.65
CHS3	YBR023C	TY1B-PR3	P0C2J1	1755 aa	Known RBP	4.74	□□□□□ -1.65
CHS3	YBR023C	TY1B-JR1	P47098	1755 aa		4.74	□□□□□ -1.65
CHS3	YBR023C	TY1B-ML2	Q03434	1755 aa	Known RBP	4.74	□□□□□ -1.65
CHS3	YBR023C	TY1B-ER1	Q03612	1755 aa		4.74	□□□□□ -1.65
CHS3	YBR023C	TY1B-ML1	Q04711	1755 aa	Known RBP	4.74	□□□□□ -1.65
CHS3	YBR023C	TY1B-GR2	Q12269	1755 aa		4.74	□□□□□ -1.65
CHS3	YBR023C	TY1B-OL	Q12273	1755 aa		4.74	□□□□□ -1.65
CHS3	YBR023C	TY1B-PL	Q12414	1755 aa	Known RBP	4.74	□□□□□ -1.65
CHS3	YBR023C	TY2B-B	Q12491	1770 aa		4.73	□□□□□ -1.65
CHS3	YBR023C	YNR021W	P53723	404 aa	Known RBP	4.73	□□□□□ -1.65
CHS3	YBR023C	URN1	Q06525	465 aa	Known RBP	4.73	□□□□□ -1.65
CHS3	YBR023C	SUB2	Q07478	446 aa	Known RBP	4.73	□□□□□ -1.65
CHS3	YBR023C	RPL34B	P40525	121 aa	Known RBP	4.73	□□□□□ -1.65
CHS3	YBR023C	MAM3	Q12296	706 aa		4.73	□□□□□ -1.65
CHS3	YBR023C	TY1B-DR3	Q99231	1755 aa		4.72	□□□□□ -1.65
CHS3	YBR023C	RPA190	P10964	1664 aa	Known RBP	4.72	□□□□□ -1.65
CHS3	YBR023C	ESC1	Q03661	1658 aa	Known RBP	4.72	□□□□□ -1.65
CHS3	YBR023C	PRI1	P10363	409 aa		4.71	□□□□□ -1.65
CHS3	YBR023C	ERG12	P07277	443 aa		4.71	□□□□□ -1.66
CHS3	YBR023C	CPS1	P27614	576 aa		4.7	□□□□□ -1.66
CHS3	YBR023C	PAN1	P32521	1480 aa		4.7	□□□□□ -1.66
CHS3	YBR023C	RKR1	Q04781	1562 aa		4.7	□□□□□ -1.66
CHS3	YBR023C	TOP2	P06786	1428 aa	Known RBP	4.7	□□□□□ -1.66
CHS3	YBR023C	DSF2	P38213	736 aa		4.7	□□□□□ -1.66
CHS3	YBR023C	BRL1	P38770	471 aa		4.7	□□□□□ -1.66
CHS3	YBR023C	BIM1	P40013	344 aa		4.69	□□□□□ -1.66
CHS3	YBR023C	PSD2	P53037	1138 aa	Known RBP	4.69	□□□□□ -1.66
CHS3	YBR023C	YPR204W	Q08995	1032 aa		4.69	□□□□□ -1.66
CHS3	YBR023C	NOP8	Q08287	484 aa	Predicted RBP	4.69	□□□□□ -1.66
CHS3	YBR023C	RPL34A	P87262	121 aa	Predicted RBP	4.68	□□□□□ -1.66
CHS3	YBR023C	YKR023W	P36119	530 aa	Known RBP	4.68	□□□□□ -1.66
CHS3	YBR023C	ATG32	P40458	529 aa		4.68	□□□□□ -1.66
CHS3	YBR023C	MIF2	P35201	549 aa		4.67	□□□□□ -1.66
CHS3	YBR023C	LTE1	P07866	1435 aa		4.67	□□□□□ -1.66
CHS3	YBR023C	BNI1	P41832	1953 aa		4.67	□□□□□ -1.66
CHS3	YBR023C	POL1	P13382	1468 aa		4.67	□□□□□ -1.66
CHS3	YBR023C	SLD2	P34252	453 aa		4.66	□□□□□ -1.66
CHS3	YBR023C	AAD16	Q02895	342 aa		4.65	□□□□□ -1.67
CHS3	YBR023C	SNU71	P53207	620 aa	Known RBP	4.65	□□□□□ -1.67
CHS3	YBR023C	RRN6	P32786	894 aa		4.64	□□□□□ -1.67
CHS3	YBR023C	BBC1	P47068	1157 aa		4.64	□□□□□ -1.67
CHS3	YBR023C	MMS22	Q06164	1454 aa		4.64	□□□□□ -1.67
CHS3	YBR023C	YPR148C	Q06523	435 aa		4.64	□□□□□ -1.67
CHS3	YBR023C	TY1B-JR2	P47100	1755 aa	Known RBP	4.63	□□□□□ -1.67
CHS3	YBR023C	TY1B-ER2	Q03619	1755 aa		4.63	□□□□□ -1.67
CHS3	YBR023C	TY1B-MR1	Q04214	1755 aa		4.63	□□□□□ -1.67
CHS3	YBR023C	TY1B-MR2	Q04670	1755 aa	Known RBP	4.63	□□□□□ -1.67
CHS3	YBR023C	TY1B-LR1	Q12088	1755 aa	Known RBP	4.63	□□□□□ -1.67
CHS3	YBR023C	TY1B-NL1	Q12112	1755 aa		4.63	□□□□□ -1.67
CHS3	YBR023C	TY1B-GR1	Q12141	1755 aa		4.63	□□□□□ -1.67
CHS3	YBR023C	TY1B-BL	Q12490	1755 aa		4.63	□□□□□ -1.67
CHS3	YBR023C	SMC4	Q12267	1418 aa		4.63	□□□□□ -1.67
CHS3	YBR023C	YRF1-1	P0CX20	1796 aa		4.63	□□□□□ -1.67
CHS3	YBR023C	YRF1-5	P0CX21	1796 aa		4.63	□□□□□ -1.67
CHS3	YBR023C	YRF1-8	P0CX22	1796 aa		4.63	□□□□□ -1.67
CHS3	YBR023C	SSA4	P22202	642 aa	Known RBP	4.63	□□□□□ -1.67
CHS3	YBR023C	HAT1	Q12341	374 aa		4.63	□□□□□ -1.67
CHS3	YBR023C	YOR1	P53049	1477 aa		4.63	□□□□□ -1.67
CHS3	YBR023C	MRX12	P47084	519 aa		4.63	□□□□□ -1.67
CHS3	YBR023C	BRN1	P38170	754 aa		4.61	□□□□□ -1.67
CHS3	YBR023C	AIM7	Q12156	149 aa		4.61	□□□□□ -1.67
CHS3	YBR023C	REF2	P42073	533 aa	Predicted RBP	4.6	□□□□□ -1.67
CHS3	YBR023C	NUP42	P49686	430 aa	Known RBP	4.6	□□□□□ -1.67
CHS3	YBR023C	YML083C	Q04526	418 aa		4.6	□□□□□ -1.67
CHS3	YBR023C	TYW1	Q08960	810 aa	Known RBP	4.6	□□□□□ -1.67
CHS3	YBR023C	COQ8	P27697	501 aa		4.6	□□□□□ -1.67
CHS3	YBR023C	NTE1	Q04958	1679 aa		4.59	□□□□□ -1.67
CHS3	YBR023C	YJR008W	P47085	338 aa		4.59	□□□□□ -1.67
CHS3	YBR023C	TFC8	Q12308	588 aa		4.59	□□□□□ -1.68
CHS3	YBR023C	RPO21	P04050	1733 aa	Known RBP	4.59	□□□□□ -1.68
CHS3	YBR023C	GEA2	P39993	1459 aa	Known RBP	4.58	□□□□□ -1.68
CHS3	YBR023C	GLN1	P32288	370 aa	Known RBP	4.58	□□□□□ -1.68
CHS3	YBR023C	CSN12	P47130	423 aa		4.58	□□□□□ -1.68
CHS3	YBR023C	CDC3	P32457	520 aa	Known RBP	4.58	□□□□□ -1.68
CHS3	YBR023C	YBL036C	P38197	257 aa		4.58	□□□□□ -1.68

Retrieved 100 of 5,963 RNA–protein pairs in 59.7 ms