RNA–Protein interactions for RNA: YAL035W

FUN12, Transcript of Translation initiation factor eIF5B, yeast

Gene FUN12, Length 3,009 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
FUN12	YAL035W	SEN54	Q02825	467 aa	Predicted RBP	4.96	□□□□□ -1.62
FUN12	YAL035W	OCA5	P38738	679 aa		4.96	□□□□□ -1.62
FUN12	YAL035W	YMR1	P47147	688 aa	Known RBP RIP-Chip data	4.95	□□□□□ -1.62	not detected
FUN12	YAL035W	SPC42	P36094	363 aa		4.95	□□□□□ -1.62
FUN12	YAL035W	NUP42	P49686	430 aa	Known RBP	4.95	□□□□□ -1.62
FUN12	YAL035W	SGS1	P35187	1447 aa		4.94	□□□□□ -1.62
FUN12	YAL035W	REF2	P42073	533 aa	Predicted RBP	4.94	□□□□□ -1.62
FUN12	YAL035W	YFR006W	P43590	535 aa		4.94	□□□□□ -1.62
FUN12	YAL035W	HPC2	Q01448	625 aa		4.93	□□□□□ -1.62
FUN12	YAL035W	YTA7	P40340	1379 aa		4.93	□□□□□ -1.62
FUN12	YAL035W	DBP1	P24784	617 aa	Known RBP	4.92	□□□□□ -1.62
FUN12	YAL035W	IES2	P40154	320 aa		4.92	□□□□□ -1.62
FUN12	YAL035W	ATF2	P53296	535 aa		4.92	□□□□□ -1.62
FUN12	YAL035W	VPS29	P38759	282 aa		4.92	□□□□□ -1.62
FUN12	YAL035W	TPO2	P53283	614 aa		4.92	□□□□□ -1.62
FUN12	YAL035W	TIF4632	P39936	914 aa	Known RBP	4.91	□□□□□ -1.62
FUN12	YAL035W	YOR238W	Q08634	303 aa		4.91	□□□□□ -1.62
FUN12	YAL035W	GLN1	P32288	370 aa	Known RBP	4.91	□□□□□ -1.62
FUN12	YAL035W	NOP53	Q12080	455 aa	Known RBP	4.91	□□□□□ -1.62
FUN12	YAL035W	GLC3	P32775	704 aa		4.91	□□□□□ -1.62
FUN12	YAL035W	NUG1	P40010	520 aa	Known RBP	4.9	□□□□□ -1.62
FUN12	YAL035W	KIC1	P38692	1080 aa		4.89	□□□□□ -1.63
FUN12	YAL035W	BRL1	P38770	471 aa		4.89	□□□□□ -1.63
FUN12	YAL035W	NOP7	P53261	605 aa	Known RBP	4.89	□□□□□ -1.63
FUN12	YAL035W	DIT2	P21595	489 aa		4.89	□□□□□ -1.63
FUN12	YAL035W	MAK21	Q12176	1025 aa	Known RBP	4.88	□□□□□ -1.63
FUN12	YAL035W	RRN6	P32786	894 aa		4.88	□□□□□ -1.63
FUN12	YAL035W	PIB1	Q06651	286 aa		4.88	□□□□□ -1.63
FUN12	YAL035W	ATH1	P48016	1211 aa		4.87	□□□□□ -1.63
FUN12	YAL035W	TFB3	Q03290	321 aa		4.87	□□□□□ -1.63
FUN12	YAL035W	JSN1	P47135	1091 aa	Known RBP RIP-Chip data	4.86	□□□□□ -1.63	not detected
FUN12	YAL035W	STS1	P38637	319 aa		4.86	□□□□□ -1.63
FUN12	YAL035W	PKC1	P24583	1151 aa		4.85	□□□□□ -1.63
FUN12	YAL035W	BRN1	P38170	754 aa		4.85	□□□□□ -1.63
FUN12	YAL035W	GTT3	P39996	337 aa		4.85	□□□□□ -1.63
FUN12	YAL035W	EDS1	P38073	919 aa		4.85	□□□□□ -1.63
FUN12	YAL035W	SSF1	P38789	453 aa	Predicted RBP	4.85	□□□□□ -1.63
FUN12	YAL035W	YAP5	P40574	245 aa		4.85	□□□□□ -1.63
FUN12	YAL035W	PTC3	P34221	468 aa	Known RBP	4.84	□□□□□ -1.63
FUN12	YAL035W	NOB1	Q08444	459 aa	Known RBP	4.84	□□□□□ -1.63
FUN12	YAL035W	GIN4	Q12263	1142 aa		4.84	□□□□□ -1.63
FUN12	YAL035W	RRP15	Q06511	250 aa	Predicted RBP	4.83	□□□□□ -1.64
FUN12	YAL035W	KRI1	P42846	591 aa	Known RBP	4.83	□□□□□ -1.64
FUN12	YAL035W	OSW7	P43611	510 aa		4.83	□□□□□ -1.64
FUN12	YAL035W	HEM3	P28789	327 aa		4.83	□□□□□ -1.64
FUN12	YAL035W	VHR2	P40041	505 aa		4.83	□□□□□ -1.64
FUN12	YAL035W	GRE2	Q12068	342 aa	Known RBP	4.83	□□□□□ -1.64
FUN12	YAL035W	MET10	P39692	1035 aa		4.82	□□□□□ -1.64
FUN12	YAL035W	MDG1	P53885	366 aa		4.82	□□□□□ -1.64
FUN12	YAL035W	BIM1	P40013	344 aa		4.8	□□□□□ -1.64
FUN12	YAL035W	ATG32	P40458	529 aa		4.8	□□□□□ -1.64
FUN12	YAL035W	ASF1	P32447	279 aa		4.8	□□□□□ -1.64
FUN12	YAL035W	COX6	P00427	148 aa		4.8	□□□□□ -1.64
FUN12	YAL035W	SPA2	P23201	1466 aa	Known RBP	4.79	□□□□□ -1.64
FUN12	YAL035W	SSN2	P38931	1420 aa		4.79	□□□□□ -1.64
FUN12	YAL035W	YFR016C	P43597	1233 aa	Known RBP	4.79	□□□□□ -1.64
FUN12	YAL035W	YAF9	P53930	226 aa		4.79	□□□□□ -1.64
FUN12	YAL035W	RAD54	P32863	898 aa		4.78	□□□□□ -1.64
FUN12	YAL035W	ALD2	P47771	506 aa		4.78	□□□□□ -1.64
FUN12	YAL035W	VPS72	Q03388	795 aa		4.78	□□□□□ -1.64
FUN12	YAL035W	VMA1	P17255	1071 aa	Known RBP	4.78	□□□□□ -1.64
FUN12	YAL035W	SLD2	P34252	453 aa		4.78	□□□□□ -1.64
FUN12	YAL035W	ALD4	P46367	519 aa	Known RBP	4.78	□□□□□ -1.64
FUN12	YAL035W	YJR008W	P47085	338 aa		4.78	□□□□□ -1.64
FUN12	YAL035W	GUT1	P32190	709 aa		4.77	□□□□□ -1.65
FUN12	YAL035W	UBX5	Q06682	500 aa		4.77	□□□□□ -1.65
FUN12	YAL035W	KEX1	P09620	729 aa		4.76	□□□□□ -1.65
FUN12	YAL035W	PDR1	P12383	1068 aa		4.76	□□□□□ -1.65
FUN12	YAL035W	SSA4	P22202	642 aa	Known RBP	4.76	□□□□□ -1.65
FUN12	YAL035W	RTS3	P53289	263 aa		4.76	□□□□□ -1.65
FUN12	YAL035W	GYP5	Q12344	894 aa		4.76	□□□□□ -1.65
FUN12	YAL035W	RPL34B	P40525	121 aa	Known RBP	4.76	□□□□□ -1.65
FUN12	YAL035W	TIF1	P10081	395 aa	Known RBP	4.75	□□□□□ -1.65
FUN12	YAL035W	SSA2	P10592	639 aa	Known RBP	4.75	□□□□□ -1.65
FUN12	YAL035W	RPP1B	P10622	106 aa	Known RBP	4.75	□□□□□ -1.65
FUN12	YAL035W	TTI1	P36097	1038 aa		4.75	□□□□□ -1.65
FUN12	YAL035W	CST6	P40535	587 aa		4.75	□□□□□ -1.65
FUN12	YAL035W	ERG12	P07277	443 aa		4.75	□□□□□ -1.65
FUN12	YAL035W	NMD2	P38798	1089 aa	Known RBP	4.75	□□□□□ -1.65
FUN12	YAL035W	TGL3	P40308	642 aa		4.75	□□□□□ -1.65
FUN12	YAL035W	FPR4	Q06205	392 aa	Predicted RBP	4.75	□□□□□ -1.65
FUN12	YAL035W	BUD21	Q08492	214 aa	Predicted RBP	4.75	□□□□□ -1.65
FUN12	YAL035W	ENP1	P38333	483 aa	Known RBP	4.74	□□□□□ -1.65
FUN12	YAL035W	MAG2	Q06436	670 aa	Known RBP	4.74	□□□□□ -1.65
FUN12	YAL035W	CDC3	P32457	520 aa	Known RBP	4.73	□□□□□ -1.65
FUN12	YAL035W	IPL1	P38991	367 aa		4.73	□□□□□ -1.65
FUN12	YAL035W	SUB1	P54000	292 aa	Known RBP	4.73	□□□□□ -1.65
FUN12	YAL035W	NSR1	P27476	414 aa	Known RBP RIP-Chip data	4.73	□□□□□ -1.65	not detected
FUN12	YAL035W	ISW1	P38144	1129 aa		4.73	□□□□□ -1.65
FUN12	YAL035W	INO80	P53115	1489 aa		4.73	□□□□□ -1.65
FUN12	YAL035W	CPS1	P27614	576 aa		4.72	□□□□□ -1.65
FUN12	YAL035W	DCW1	P36091	449 aa		4.72	□□□□□ -1.65
FUN12	YAL035W	KTR1	P27810	393 aa	Known RBP	4.72	□□□□□ -1.65
FUN12	YAL035W	UBP14	P38237	781 aa	Known RBP	4.72	□□□□□ -1.65
FUN12	YAL035W	ATE1	P16639	503 aa		4.72	□□□□□ -1.65
FUN12	YAL035W	PUP1	P25043	261 aa		4.72	□□□□□ -1.65
FUN12	YAL035W	YMR196W	Q04336	1088 aa		4.72	□□□□□ -1.65
FUN12	YAL035W	CSN12	P47130	423 aa		4.71	□□□□□ -1.66
FUN12	YAL035W	YML083C	Q04526	418 aa		4.71	□□□□□ -1.66
FUN12	YAL035W	YGR273C	P53329	174 aa		4.7	□□□□□ -1.66

Retrieved 100 of 5,963 RNA–protein pairs in 40.1 ms