RNA–Protein interactions for RNA: YAL018C

LDS1, Transcript of Protein Involved in spore wall assembly, yeastyeast

Gene LDS1, Length 978 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
LDS1YAL018C TY2B-DR3Q07791 1770 aaKnown RBP9.29□□□□□ -0.92
LDS1YAL018C TY2B-OR1Q12113 1770 aa9.29□□□□□ -0.92
LDS1YAL018C TY2B-DR1Q12472 1770 aa9.29□□□□□ -0.92
LDS1YAL018C TY2B-OR2Q12501 1770 aa9.29□□□□□ -0.92
LDS1YAL018C SAS10Q12136 610 aaPredicted RBP9.28□□□□□ -0.92
LDS1YAL018C MET5P47169 1442 aa9.26□□□□□ -0.93
LDS1YAL018C RSM7P47150 247 aa9.26□□□□□ -0.93
LDS1YAL018C YAH1Q12184 172 aaKnown RBP9.26□□□□□ -0.93
LDS1YAL018C DNF1P32660 1571 aa9.23□□□□□ -0.93
LDS1YAL018C VTH1P40438 1549 aa9.21□□□□□ -0.94
LDS1YAL018C VTH2P40890 1549 aa9.21□□□□□ -0.94
LDS1YAL018C TY1B-DR3Q99231 1755 aa9.2□□□□□ -0.94
LDS1YAL018C AI2P03876 854 aa9.2□□□□□ -0.94
LDS1YAL018C TY1B-BRQ12193 1756 aa9.19□□□□□ -0.94
LDS1YAL018C TY1B-GR3Q12316 1755 aa9.19□□□□□ -0.94
LDS1YAL018C TY2B-BQ12491 1770 aa9.19□□□□□ -0.94
LDS1YAL018C TY1B-ORQ92393 1755 aa9.19□□□□□ -0.94
LDS1YAL018C SNQ2P32568 1501 aaKnown RBP9.19□□□□□ -0.94
LDS1YAL018C RTT106P40161 455 aa9.17□□□□□ -0.94
LDS1YAL018C SNT2P53127 1403 aa9.16□□□□□ -0.94
LDS1YAL018C TY1B-HO13535 1793 aa9.16□□□□□ -0.94
LDS1YAL018C TY1B-DR5P0C2I2 1755 aa9.16□□□□□ -0.94
LDS1YAL018C TY1B-DR6P0C2I3 1755 aa9.16□□□□□ -0.94
LDS1YAL018C TY1B-LR2P0C2I5 1755 aa9.16□□□□□ -0.94
LDS1YAL018C TY1B-LR3P0C2I6 1755 aaKnown RBP9.16□□□□□ -0.94
LDS1YAL018C TY1B-PR1P0C2I9 1755 aaKnown RBP9.16□□□□□ -0.94
LDS1YAL018C TY1B-PR2P0C2J0 1756 aa9.16□□□□□ -0.94
LDS1YAL018C TY1B-PR3P0C2J1 1755 aaKnown RBP9.16□□□□□ -0.94
LDS1YAL018C TY1B-JR1P47098 1755 aa9.16□□□□□ -0.94
LDS1YAL018C TY1B-ML2Q03434 1755 aaKnown RBP9.16□□□□□ -0.94
LDS1YAL018C TY1B-ER1Q03612 1755 aa9.16□□□□□ -0.94
LDS1YAL018C TY1B-ML1Q04711 1755 aaKnown RBP9.16□□□□□ -0.94
LDS1YAL018C TY1B-GR2Q12269 1755 aa9.16□□□□□ -0.94
LDS1YAL018C TY1B-OLQ12273 1755 aa9.16□□□□□ -0.94
LDS1YAL018C TY1B-PLQ12414 1755 aaKnown RBP9.16□□□□□ -0.94
LDS1YAL018C BBC1P47068 1157 aa9.15□□□□□ -0.94
LDS1YAL018C YLR271WQ06152 274 aa9.15□□□□□ -0.94
LDS1YAL018C NUP159P40477 1460 aa9.14□□□□□ -0.95
LDS1YAL018C MET10P39692 1035 aa9.12□□□□□ -0.95
LDS1YAL018C ESC1Q03661 1658 aaKnown RBP9.11□□□□□ -0.95
LDS1YAL018C RPA190P10964 1664 aaKnown RBP9.1□□□□□ -0.95
LDS1YAL018C LTE1P07866 1435 aa9.08□□□□□ -0.96
LDS1YAL018C MST1P07236 462 aa9.08□□□□□ -0.96
LDS1YAL018C IFH1P39520 1085 aa9.08□□□□□ -0.96
LDS1YAL018C YOR238WQ08634 303 aa9.07□□□□□ -0.96
LDS1YAL018C GEA2P39993 1459 aaKnown RBP9.07□□□□□ -0.96
LDS1YAL018C NSR1P27476 414 aaKnown RBP RIP-Chip data9.04□□□□□ -0.96not detected
LDS1YAL018C YBL029C-AQ3E756 94 aa9.04□□□□□ -0.96
LDS1YAL018C PSD2P53037 1138 aaKnown RBP9.03□□□□□ -0.96
LDS1YAL018C PDR15Q04182 1529 aaKnown RBP9.03□□□□□ -0.96
LDS1YAL018C GEA1P47102 1408 aaPredicted RBP9.03□□□□□ -0.96
LDS1YAL018C VPS15P22219 1454 aa9.02□□□□□ -0.97
LDS1YAL018C TY1B-JR2P47100 1755 aaKnown RBP9□□□□□ -0.97
LDS1YAL018C TY1B-ER2Q03619 1755 aa9□□□□□ -0.97
LDS1YAL018C TY1B-MR1Q04214 1755 aa9□□□□□ -0.97
LDS1YAL018C TY1B-MR2Q04670 1755 aaKnown RBP9□□□□□ -0.97
LDS1YAL018C TY1B-LR1Q12088 1755 aaKnown RBP9□□□□□ -0.97
LDS1YAL018C TY1B-NL1Q12112 1755 aa9□□□□□ -0.97
LDS1YAL018C TY1B-GR1Q12141 1755 aa9□□□□□ -0.97
LDS1YAL018C TY1B-BLQ12490 1755 aa9□□□□□ -0.97
LDS1YAL018C NTE1Q04958 1679 aa8.99□□□□□ -0.97
LDS1YAL018C CAT8P39113 1433 aa8.98□□□□□ -0.97
LDS1YAL018C SSP1P38871 571 aa8.98□□□□□ -0.97
LDS1YAL018C PDR12Q02785 1511 aa8.97□□□□□ -0.97
LDS1YAL018C RPO21P04050 1733 aaKnown RBP8.97□□□□□ -0.97
LDS1YAL018C ULS1Q08562 1619 aa8.96□□□□□ -0.98
LDS1YAL018C YAP5P40574 245 aa8.95□□□□□ -0.98
LDS1YAL018C IKI3Q06706 1349 aaKnown RBP8.95□□□□□ -0.98
LDS1YAL018C DRS2P39524 1355 aa8.95□□□□□ -0.98
LDS1YAL018C MLP2P40457 1679 aa8.94□□□□□ -0.98
LDS1YAL018C NUP157P40064 1391 aaKnown RBP8.94□□□□□ -0.98
LDS1YAL018C VNX1P42839 908 aa8.92□□□□□ -0.98
LDS1YAL018C IRC20Q06554 1556 aa8.9□□□□□ -0.98
LDS1YAL018C ITT1Q04638 464 aa8.9□□□□□ -0.98
LDS1YAL018C ARP8Q12386 881 aaKnown RBP RIP-Chip data8.88□□□□□ -0.99not detected
LDS1YAL018C YRF1-1P0CX20 1796 aa8.88□□□□□ -0.99
LDS1YAL018C YRF1-5P0CX21 1796 aa8.88□□□□□ -0.99
LDS1YAL018C YRF1-8P0CX22 1796 aa8.88□□□□□ -0.99
LDS1YAL018C IQG1Q12280 1495 aa8.88□□□□□ -0.99
LDS1YAL018C GDB1Q06625 1536 aa8.87□□□□□ -0.99
LDS1YAL018C WSC3Q12215 556 aa8.87□□□□□ -0.99
LDS1YAL018C PDR10P51533 1564 aa8.86□□□□□ -0.99
LDS1YAL018C MRM1P25270 412 aa8.86□□□□□ -0.99
LDS1YAL018C CKB1P43639 278 aa8.86□□□□□ -0.99
LDS1YAL018C SPP1Q03012 353 aa8.85□□□□□ -0.99
LDS1YAL018C BUD3P25558 1636 aa8.84□□□□□ -0.99
LDS1YAL018C CST9Q06032 482 aa8.84□□□□□ -0.99
LDS1YAL018C TY3B-GQ99315 1547 aa8.83□□□□□ -1
LDS1YAL018C SPO14P36126 1683 aa8.82□□□□□ -1
LDS1YAL018C TRM3Q07527 1436 aa8.82□□□□□ -1
LDS1YAL018C NUP170P38181 1502 aa8.82□□□□□ -1
LDS1YAL018C SRB8P25648 1427 aa8.81□□□□□ -1
LDS1YAL018C MMS1Q06211 1407 aa8.8□□□□□ -1
LDS1YAL018C GTT3P39996 337 aa8.79□□□□□ -1
LDS1YAL018C YSP2Q06681 1438 aa8.79□□□□□ -1
LDS1YAL018C BUD21Q08492 214 aaPredicted RBP8.77□□□□□ -1.01
LDS1YAL018C MGA2P40578 1113 aa8.76□□□□□ -1.01
LDS1YAL018C BNR1P40450 1375 aa8.75□□□□□ -1.01
LDS1YAL018C PIB1Q06651 286 aa8.75□□□□□ -1.01
LDS1YAL018C SSM4P40318 1319 aa8.75□□□□□ -1.01
Retrieved 100 of 5,963 RNA–protein pairs in 38.5 ms