RNA–Protein interactions for RNA: ENST00000641746.1

CASC19-256, Transcript of cancer susceptibility 19, human

Gene CASC19, Length 958 nt, Biotype lincRNA.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CASC19-256	ENST00000641746	CCDC61	Q9Y6R9	512 aa		14.3	□□□□□ -0.12
CASC19-256	ENST00000641746	C7	P10643	843 aa		14.27	□□□□□ -0.13
CASC19-256	ENST00000641746	METRN	Q9UJH8	293 aa		14.27	□□□□□ -0.13
CASC19-256	ENST00000641746	SLC39A7	Q92504	469 aa		14.26	□□□□□ -0.13
CASC19-256	ENST00000641746	KIF12	Q96FN5	646 aa		14.24	□□□□□ -0.13
CASC19-256	ENST00000641746	POTEJ	P0CG39	1038 aa		14.23	□□□□□ -0.13
CASC19-256	ENST00000641746	PLSCR2	Q9NRY7	297 aa		14.21	□□□□□ -0.13
CASC19-256	ENST00000641746	MIER1	Q8N108	512 aa		14.2	□□□□□ -0.14
CASC19-256	ENST00000641746	ATN1	P54259	1190 aa	Predicted RBP	14.19	□□□□□ -0.14
CASC19-256	ENST00000641746	PLEKHG5	O94827	1062 aa		14.15	□□□□□ -0.14
CASC19-256	ENST00000641746	RASEF	Q8IZ41	740 aa		14.14	□□□□□ -0.15
CASC19-256	ENST00000641746	POTEM	A6NI47	508 aa		14.13	□□□□□ -0.15
CASC19-256	ENST00000641746	MAP3K13	O43283	966 aa		14.13	□□□□□ -0.15
CASC19-256	ENST00000641746	TRPC6	Q9Y210	931 aa		14.13	□□□□□ -0.15
CASC19-256	ENST00000641746	MAMSTR	Q6ZN01	415 aa		14.12	□□□□□ -0.15
CASC19-256	ENST00000641746	BMP2K	Q9NSY1	1161 aa	Predicted RBP	14.12	□□□□□ -0.15
CASC19-256	ENST00000641746	POTEG	Q6S5H5	508 aa		14.09	□□□□□ -0.15
CASC19-256	ENST00000641746	POTEF	A5A3E0	1075 aa		14.08	□□□□□ -0.16
CASC19-256	ENST00000641746	TIE1	P35590	1138 aa		14.07	□□□□□ -0.16
CASC19-256	ENST00000641746	PLCD3	Q8N3E9	789 aa		14.02	□□□□□ -0.17
CASC19-256	ENST00000641746	SCUBE2	Q9NQ36	999 aa		14	□□□□□ -0.17
CASC19-256	ENST00000641746	TTLL13P	A6NNM8	815 aa		13.99	□□□□□ -0.17
CASC19-256	ENST00000641746	SGIP1	Q9BQI5	828 aa		13.98	□□□□□ -0.17
CASC19-256	ENST00000641746	NUBP1	P53384	320 aa		13.97	□□□□□ -0.17
CASC19-256	ENST00000641746	LCE2D	Q5TA82	110 aa	Predicted RBP	13.96	□□□□□ -0.17
CASC19-256	ENST00000641746	PCDH10	Q9P2E7	1040 aa		13.95	□□□□□ -0.18
CASC19-256	ENST00000641746	COLQ	Q9Y215	455 aa	Predicted RBP	13.95	□□□□□ -0.18
CASC19-256	ENST00000641746	FAM163A	Q96GL9	167 aa	Predicted RBP	13.94	□□□□□ -0.18
CASC19-256	ENST00000641746	ZBTB47	Q9UFB7	747 aa	Predicted RBP	13.93	□□□□□ -0.18
CASC19-256	ENST00000641746	PCDHB13	Q9Y5F0	798 aa		13.92	□□□□□ -0.18
CASC19-256	ENST00000641746	SEC24B	O95487	1268 aa		13.9	□□□□□ -0.18
CASC19-256	ENST00000641746	TRIM35	Q9UPQ4	493 aa		13.89	□□□□□ -0.19
CASC19-256	ENST00000641746	IER5L	Q5T953	404 aa		13.88	□□□□□ -0.19
CASC19-256	ENST00000641746	IFNL1	Q8IU54	200 aa		13.86	□□□□□ -0.19
CASC19-256	ENST00000641746	FKBP8	Q14318	412 aa		13.83	□□□□□ -0.2
CASC19-256	ENST00000641746	FAM212A	Q96EL1	285 aa		13.82	□□□□□ -0.2
CASC19-256	ENST00000641746	TMEM106C	Q9BVX2	250 aa		13.78	□□□□□ -0.2
CASC19-256	ENST00000641746	DCAF8	Q5TAQ9	597 aa		13.7	□□□□□ -0.22
CASC19-256	ENST00000641746	IRX5	P78411	483 aa	Predicted RBP	13.69	□□□□□ -0.22
CASC19-256	ENST00000641746	PLCG2	P16885	1265 aa		13.68	□□□□□ -0.22
CASC19-256	ENST00000641746	SLAIN1	Q8ND83	568 aa		13.68	□□□□□ -0.22
CASC19-256	ENST00000641746	PYGB	P11216	843 aa		13.66	□□□□□ -0.22
CASC19-256	ENST00000641746	OCEL1	Q9H607	264 aa		13.62	□□□□□ -0.23
CASC19-256	ENST00000641746	FBXO3	Q9UK99	471 aa		13.62	□□□□□ -0.23
CASC19-256	ENST00000641746	PCDHB8	Q9UN66	801 aa		13.61	□□□□□ -0.23
CASC19-256	ENST00000641746	ST18	O60284	1047 aa		13.6	□□□□□ -0.23
CASC19-256	ENST00000641746	CDAN1	Q8IWY9	1227 aa		13.6	□□□□□ -0.23
CASC19-256	ENST00000641746	GSE1	Q14687	1217 aa		13.49	□□□□□ -0.25
CASC19-256	ENST00000641746	VASP	P50552	380 aa	Predicted RBP	13.48	□□□□□ -0.25
CASC19-256	ENST00000641746	KLHL34	Q8N239	644 aa		13.48	□□□□□ -0.25
CASC19-256	ENST00000641746	EIF2AK3	Q9NZJ5	1116 aa	Known RBP	13.48	□□□□□ -0.25
CASC19-256	ENST00000641746	CHRM1	P11229	460 aa	Predicted RBP	13.46	□□□□□ -0.25
CASC19-256	ENST00000641746	ZNF467	Q7Z7K2	595 aa	Predicted RBP	13.46	□□□□□ -0.25
CASC19-256	ENST00000641746	SNPH	O15079	494 aa		13.44	□□□□□ -0.26
CASC19-256	ENST00000641746	PDCD7	Q8N8D1	485 aa	Known RBP	13.44	□□□□□ -0.26
CASC19-256	ENST00000641746	TMEM121B	Q9BXQ6	578 aa	Predicted RBP	13.43	□□□□□ -0.26
CASC19-256	ENST00000641746	MKRN3	Q13064	507 aa	Known RBP	13.39	□□□□□ -0.27
CASC19-256	ENST00000641746	PSEN1	P49768	467 aa		13.37	□□□□□ -0.27
CASC19-256	ENST00000641746	GOLGA2	Q08379	1002 aa		13.36	□□□□□ -0.27
CASC19-256	ENST00000641746	L3MBTL3	Q96JM7	780 aa	Predicted RBP	13.36	□□□□□ -0.27
CASC19-256	ENST00000641746	MARVELD3	Q96A59	401 aa		13.34	□□□□□ -0.27
CASC19-256	ENST00000641746	BCLAF1	Q9NYF8	920 aa	Known RBP eCLIP	13.34	□□□□□ -0.27	7e-8	■□□□□ 10.2
CASC19-256	ENST00000641746	C3orf67	Q6ZVT6	689 aa		13.31	□□□□□ -0.28
CASC19-256	ENST00000641746	ILDR1	Q86SU0	546 aa	Predicted RBP	13.31	□□□□□ -0.28
CASC19-256	ENST00000641746	SPNS2	Q8IVW8	549 aa		13.29	□□□□□ -0.28
CASC19-256	ENST00000641746	MMRN1	Q13201	1228 aa		13.27	□□□□□ -0.29
CASC19-256	ENST00000641746	PDAP1	Q13442	181 aa	Known RBP	13.27	□□□□□ -0.29
CASC19-256	ENST00000641746	IFNLR1	Q8IU57	520 aa	Predicted RBP	13.25	□□□□□ -0.29
CASC19-256	ENST00000641746	DPY19L2	Q6NUT2	758 aa		13.24	□□□□□ -0.29
CASC19-256	ENST00000641746	SPOCK2	Q92563	424 aa		13.23	□□□□□ -0.29
CASC19-256	ENST00000641746	CIZ1	Q9ULV3	898 aa	Predicted RBP	13.2	□□□□□ -0.3
CASC19-256	ENST00000641746	EMP3	P54852	163 aa		13.19	□□□□□ -0.3
CASC19-256	ENST00000641746	CABP2	Q9NPB3	220 aa		13.19	□□□□□ -0.3
CASC19-256	ENST00000641746	POTEB3	A0JP26	581 aa		13.17	□□□□□ -0.3
CASC19-256	ENST00000641746	POTEB	Q6S5H4	581 aa		13.17	□□□□□ -0.3
CASC19-256	ENST00000641746	BOLA1	Q9Y3E2	137 aa		13.14	□□□□□ -0.31
CASC19-256	ENST00000641746	HS3ST6	Q96QI5	342 aa		13.13	□□□□□ -0.31
CASC19-256	ENST00000641746	FAM205C	A6NFA0	338 aa		13.12	□□□□□ -0.31
CASC19-256	ENST00000641746	KRTAP3-3	Q9BYR6	98 aa		13.11	□□□□□ -0.31
CASC19-256	ENST00000641746	KRTAP3-2	Q9BYR7	98 aa		13.11	□□□□□ -0.31
CASC19-256	ENST00000641746	HOXB3	P14651	431 aa	Predicted RBP	13.1	□□□□□ -0.31
CASC19-256	ENST00000641746	NISCH	Q9Y2I1	1504 aa		13.09	□□□□□ -0.31
CASC19-256	ENST00000641746	ABCC9	O60706	1549 aa		13.08	□□□□□ -0.31
CASC19-256	ENST00000641746		G3V3G9	751 aa		13.08	□□□□□ -0.32
CASC19-256	ENST00000641746	EFCAB3	Q8N7B9	438 aa		13.02	□□□□□ -0.33
CASC19-256	ENST00000641746	HOXB1	P14653	301 aa	Predicted RBP	13.01	□□□□□ -0.33
CASC19-256	ENST00000641746	TRIM41	Q8WV44	630 aa		13.01	□□□□□ -0.33
CASC19-256	ENST00000641746	ZNF710	Q8N1W2	664 aa		12.97	□□□□□ -0.33
CASC19-256	ENST00000641746	DOK7	Q18PE1	504 aa		12.96	□□□□□ -0.33
CASC19-256	ENST00000641746	ERBB3	P21860	1342 aa		12.91	□□□□□ -0.34
CASC19-256	ENST00000641746	TMEM92	Q6UXU6	159 aa		12.91	□□□□□ -0.34
CASC19-256	ENST00000641746	MICALL2	Q8IY33	904 aa		12.9	□□□□□ -0.34
CASC19-256	ENST00000641746	SOX12	O15370	315 aa		12.89	□□□□□ -0.35
CASC19-256	ENST00000641746	RIMBP2	O15034	1052 aa		12.87	□□□□□ -0.35
CASC19-256	ENST00000641746	RIOK3	O14730	519 aa	Known RBP	12.86	□□□□□ -0.35
CASC19-256	ENST00000641746	RNF25	Q96BH1	459 aa	Predicted RBP	12.86	□□□□□ -0.35
CASC19-256	ENST00000641746	MS4A4A	Q96JQ5	239 aa		12.86	□□□□□ -0.35
CASC19-256	ENST00000641746	ZFP91-CNTF	A0A0A6YYC7	529 aa	Predicted RBP	12.83	□□□□□ -0.36
CASC19-256	ENST00000641746	ZFP91	Q96JP5	570 aa	Predicted RBP	12.83	□□□□□ -0.36
CASC19-256	ENST00000641746	ZSWIM6	Q9HCJ5	1215 aa		12.83	□□□□□ -0.36

Retrieved 100 of 20,778 RNA–protein pairs in 8.1 ms