RNA–Protein interactions for RNA: ENST00000641578.1

CASC19-240, Transcript of cancer susceptibility 19, humanhuman

Gene CASC19, Length 1,061 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC19-240ENST00000641578 METRNQ9UJH8 293 aa16.53■□□□□ 0.24
CASC19-240ENST00000641578 POTEJP0CG39 1038 aa16.52■□□□□ 0.24
CASC19-240ENST00000641578 ATMINO43313 823 aaPredicted RBP16.5■□□□□ 0.23
CASC19-240ENST00000641578 C7P10643 843 aa16.47■□□□□ 0.23
CASC19-240ENST00000641578 SLC39A7Q92504 469 aa16.47■□□□□ 0.23
CASC19-240ENST00000641578 EHMT2Q96KQ7 1210 aa16.4■□□□□ 0.22
CASC19-240ENST00000641578 PCDH10Q9P2E7 1040 aa16.4■□□□□ 0.22
CASC19-240ENST00000641578 MAMSTRQ6ZN01 415 aa16.37■□□□□ 0.21
CASC19-240ENST00000641578 LCE2DQ5TA82 110 aaPredicted RBP16.36■□□□□ 0.21
CASC19-240ENST00000641578 ATN1P54259 1190 aaPredicted RBP16.32■□□□□ 0.2
CASC19-240ENST00000641578 TSPYL2Q9H2G4 693 aaPredicted RBP16.32■□□□□ 0.2
CASC19-240ENST00000641578 CCDC61Q9Y6R9 512 aa16.31■□□□□ 0.2
CASC19-240ENST00000641578 FAM163AQ96GL9 167 aaPredicted RBP16.25■□□□□ 0.19
CASC19-240ENST00000641578 SCUBE2Q9NQ36 999 aa16.25■□□□□ 0.19
CASC19-240ENST00000641578 POTEFA5A3E0 1075 aa16.24■□□□□ 0.19
CASC19-240ENST00000641578 KIF12Q96FN5 646 aa16.24■□□□□ 0.19
CASC19-240ENST00000641578 PROM2Q8N271 834 aa16.2■□□□□ 0.18
CASC19-240ENST00000641578 BMP2KQ9NSY1 1161 aaPredicted RBP16.2■□□□□ 0.18
CASC19-240ENST00000641578 TRPC6Q9Y210 931 aa16.19■□□□□ 0.18
CASC19-240ENST00000641578 MAP3K13O43283 966 aa16.11■□□□□ 0.17
CASC19-240ENST00000641578 TIE1P35590 1138 aa16.09■□□□□ 0.17
CASC19-240ENST00000641578 COLQQ9Y215 455 aaPredicted RBP16.06■□□□□ 0.16
CASC19-240ENST00000641578 RASEFQ8IZ41 740 aa16.04■□□□□ 0.16
CASC19-240ENST00000641578 TTLL13PA6NNM8 815 aa16.01■□□□□ 0.15
CASC19-240ENST00000641578 SEC24BO95487 1268 aa15.98■□□□□ 0.15
CASC19-240ENST00000641578 ABCC9O60706 1549 aa15.98■□□□□ 0.15
CASC19-240ENST00000641578 MIER1Q8N108 512 aa15.94■□□□□ 0.14
CASC19-240ENST00000641578 CDAN1Q8IWY9 1227 aa15.93■□□□□ 0.14
CASC19-240ENST00000641578 PLEKHG5O94827 1062 aa15.92■□□□□ 0.14
CASC19-240ENST00000641578 IER5LQ5T953 404 aa15.9■□□□□ 0.14
CASC19-240ENST00000641578 TRIM35Q9UPQ4 493 aa15.9■□□□□ 0.14
CASC19-240ENST00000641578 SGIP1Q9BQI5 828 aa15.86■□□□□ 0.13
CASC19-240ENST00000641578 PCDHB13Q9Y5F0 798 aa15.84■□□□□ 0.13
CASC19-240ENST00000641578 ST18O60284 1047 aa15.8■□□□□ 0.12
CASC19-240ENST00000641578 SLAIN1Q8ND83 568 aa15.8■□□□□ 0.12
CASC19-240ENST00000641578 IFNL1Q8IU54 200 aa15.76■□□□□ 0.11
CASC19-240ENST00000641578 NUBP1P53384 320 aa15.75■□□□□ 0.11
CASC19-240ENST00000641578 PLCD3Q8N3E9 789 aa15.73■□□□□ 0.11
CASC19-240ENST00000641578 TMEM106CQ9BVX2 250 aa15.71■□□□□ 0.11
CASC19-240ENST00000641578 PLCG2P16885 1265 aa15.68■□□□□ 0.1
CASC19-240ENST00000641578 IRX5P78411 483 aaPredicted RBP15.66■□□□□ 0.1
CASC19-240ENST00000641578 ZBTB47Q9UFB7 747 aaPredicted RBP15.64■□□□□ 0.09
CASC19-240ENST00000641578 FAM212AQ96EL1 285 aa15.59■□□□□ 0.09
CASC19-240ENST00000641578 MMRN1Q13201 1228 aa15.58■□□□□ 0.08
CASC19-240ENST00000641578 SPNS2Q8IVW8 549 aa15.57■□□□□ 0.08
CASC19-240ENST00000641578 TMEM121BQ9BXQ6 578 aaPredicted RBP15.56■□□□□ 0.08
CASC19-240ENST00000641578 OCEL1Q9H607 264 aa15.55■□□□□ 0.08
CASC19-240ENST00000641578 CCDC180Q9P1Z9 1646 aa15.54■□□□□ 0.08
CASC19-240ENST00000641578 SNPHO15079 494 aa15.48■□□□□ 0.07
CASC19-240ENST00000641578 MARVELD3Q96A59 401 aa15.48■□□□□ 0.07
CASC19-240ENST00000641578 EIF2AK3Q9NZJ5 1116 aaKnown RBP15.47■□□□□ 0.07
CASC19-240ENST00000641578 PYGBP11216 843 aa15.43■□□□□ 0.06
CASC19-240ENST00000641578 PCDHB8Q9UN66 801 aa15.4■□□□□ 0.06
CASC19-240ENST00000641578 DCAF8Q5TAQ9 597 aa15.38■□□□□ 0.05
CASC19-240ENST00000641578 PDCD7Q8N8D1 485 aaKnown RBP15.35■□□□□ 0.05
CASC19-240ENST00000641578 EMP3P54852 163 aa15.28■□□□□ 0.04
CASC19-240ENST00000641578 POTEB3A0JP26 581 aa15.27■□□□□ 0.04
CASC19-240ENST00000641578 POTEBQ6S5H4 581 aa15.27■□□□□ 0.04
CASC19-240ENST00000641578 C3orf67Q6ZVT6 689 aa15.26■□□□□ 0.03
CASC19-240ENST00000641578 KRTAP3-3Q9BYR6 98 aa15.25■□□□□ 0.03
CASC19-240ENST00000641578 KRTAP3-2Q9BYR7 98 aa15.25■□□□□ 0.03
CASC19-240ENST00000641578 L3MBTL3Q96JM7 780 aaPredicted RBP15.22■□□□□ 0.03
CASC19-240ENST00000641578 HS3ST6Q96QI5 342 aa15.22■□□□□ 0.03
CASC19-240ENST00000641578 MKRN3Q13064 507 aaKnown RBP15.19■□□□□ 0.02
CASC19-240ENST00000641578 FKBP8Q14318 412 aa15.19■□□□□ 0.02
CASC19-240ENST00000641578 FAM205CA6NFA0 338 aa15.18■□□□□ 0.02
CASC19-240ENST00000641578 GOLGA2Q08379 1002 aa15.17■□□□□ 0.02
CASC19-240ENST00000641578 ZNF467Q7Z7K2 595 aaPredicted RBP15.17■□□□□ 0.02
CASC19-240ENST00000641578 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP15.14■□□□□ 0.017e-8■□□□□ 10.2
CASC19-240ENST00000641578 RB1CC1Q8TDY2 1594 aa15.1■□□□□ 0.01
CASC19-240ENST00000641578 GSE1Q14687 1217 aa15.09■□□□□ 0.01
CASC19-240ENST00000641578 ILDR1Q86SU0 546 aaPredicted RBP15.09■□□□□ 0.01
CASC19-240ENST00000641578 CHRM1P11229 460 aaPredicted RBP15.08■□□□□ 0
CASC19-240ENST00000641578 PSEN1P49768 467 aa15.07■□□□□ 0
CASC19-240ENST00000641578 DPY19L2Q6NUT2 758 aa15.05■□□□□ -0
CASC19-240ENST00000641578 FBXO3Q9UK99 471 aa15.04■□□□□ -0
CASC19-240ENST00000641578 HOXB3P14651 431 aaPredicted RBP15.02■□□□□ -0
CASC19-240ENST00000641578 KLHL34Q8N239 644 aa14.98□□□□□ -0.01
CASC19-240ENST00000641578 BOLA1Q9Y3E2 137 aa14.95□□□□□ -0.02
CASC19-240ENST00000641578 HOXB1P14653 301 aaPredicted RBP14.93□□□□□ -0.02
CASC19-240ENST00000641578 PDAP1Q13442 181 aaKnown RBP14.93□□□□□ -0.02
CASC19-240ENST00000641578 VASPP50552 380 aaPredicted RBP14.92□□□□□ -0.02
CASC19-240ENST00000641578 CABP2Q9NPB3 220 aa14.9□□□□□ -0.02
CASC19-240ENST00000641578 ZNF710Q8N1W2 664 aa14.88□□□□□ -0.03
CASC19-240ENST00000641578 NACADO15069 1562 aa14.88□□□□□ -0.03
CASC19-240ENST00000641578 G3V3G9 751 aa14.87□□□□□ -0.03
CASC19-240ENST00000641578 ERBB3P21860 1342 aa14.87□□□□□ -0.03
CASC19-240ENST00000641578 DOK7Q18PE1 504 aa14.84□□□□□ -0.03
CASC19-240ENST00000641578 RNF166Q96A37 237 aaPredicted RBP14.83□□□□□ -0.04
CASC19-240ENST00000641578 ZCCHC6Q5VYS8 1495 aaKnown RBP14.82□□□□□ -0.04
CASC19-240ENST00000641578 DCAF8L2P0C7V8 631 aa14.77□□□□□ -0.05
CASC19-240ENST00000641578 VARS2Q5ST30 1063 aaKnown RBP14.77□□□□□ -0.05
CASC19-240ENST00000641578 MYT1LQ9UL68 1186 aa14.74□□□□□ -0.05
CASC19-240ENST00000641578 RIMBP2O15034 1052 aa14.72□□□□□ -0.05
CASC19-240ENST00000641578 CIZ1Q9ULV3 898 aaPredicted RBP14.69□□□□□ -0.06
CASC19-240ENST00000641578 TMEM92Q6UXU6 159 aa14.68□□□□□ -0.06
CASC19-240ENST00000641578 ZNF687Q8N1G0 1237 aa14.68□□□□□ -0.06
CASC19-240ENST00000641578 EFCAB3Q8N7B9 438 aa14.66□□□□□ -0.06
CASC19-240ENST00000641578 SPOCK2Q92563 424 aa14.66□□□□□ -0.06
CASC19-240ENST00000641578 ZSWIM6Q9HCJ5 1215 aa14.66□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms