RNA–Protein interactions for RNA: ENST00000641411.1

CASC19-227, Transcript of cancer susceptibility 19, humanhuman

BASIC

Gene CASC19, Length 1,285 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC19-227ENST00000641411 PELP1Q8IZL8 1130 aaKnown RBP15.56■□□□□ 0.08
CASC19-227ENST00000641411 KIF12Q96FN5 646 aa15.52■□□□□ 0.08
CASC19-227ENST00000641411 POTEB2H3BUK9 544 aa15.51■□□□□ 0.07
CASC19-227ENST00000641411 RASEFQ8IZ41 740 aa15.51■□□□□ 0.07
CASC19-227ENST00000641411 ATMINO43313 823 aaPredicted RBP15.5■□□□□ 0.07
CASC19-227ENST00000641411 FKBP8Q14318 412 aa15.49■□□□□ 0.07
CASC19-227ENST00000641411 OTUD5Q96G74 571 aa15.45■□□□□ 0.06
CASC19-227ENST00000641411 PLCD3Q8N3E9 789 aa15.44■□□□□ 0.06
CASC19-227ENST00000641411 SLC39A7Q92504 469 aa15.41■□□□□ 0.06
CASC19-227ENST00000641411 METRNQ9UJH8 293 aa15.41■□□□□ 0.06
CASC19-227ENST00000641411 C7P10643 843 aa15.4■□□□□ 0.06
CASC19-227ENST00000641411 ZBTB47Q9UFB7 747 aaPredicted RBP15.4■□□□□ 0.06
CASC19-227ENST00000641411 MAP3K13O43283 966 aa15.39■□□□□ 0.05
CASC19-227ENST00000641411 NUBP1P53384 320 aa15.39■□□□□ 0.05
CASC19-227ENST00000641411 ATN1P54259 1190 aaPredicted RBP15.37■□□□□ 0.05
CASC19-227ENST00000641411 BMP2KQ9NSY1 1161 aaPredicted RBP15.35■□□□□ 0.05
CASC19-227ENST00000641411 TRPC6Q9Y210 931 aa15.35■□□□□ 0.05
CASC19-227ENST00000641411 TIE1P35590 1138 aa15.33■□□□□ 0.04
CASC19-227ENST00000641411 SGIP1Q9BQI5 828 aa15.31■□□□□ 0.04
CASC19-227ENST00000641411 POTEJP0CG39 1038 aa15.3■□□□□ 0.04
CASC19-227ENST00000641411 POTEFA5A3E0 1075 aa15.23■□□□□ 0.03
CASC19-227ENST00000641411 TTLL13PA6NNM8 815 aa15.23■□□□□ 0.03
CASC19-227ENST00000641411 FBXO3Q9UK99 471 aa15.23■□□□□ 0.03
CASC19-227ENST00000641411 FAM212AQ96EL1 285 aa15.22■□□□□ 0.03
CASC19-227ENST00000641411 PCDHB13Q9Y5F0 798 aa15.21■□□□□ 0.03
CASC19-227ENST00000641411 MAMSTRQ6ZN01 415 aa15.18■□□□□ 0.02
CASC19-227ENST00000641411 IFNL1Q8IU54 200 aa15.15■□□□□ 0.02
CASC19-227ENST00000641411 IER5LQ5T953 404 aa15.12■□□□□ 0.01
CASC19-227ENST00000641411 TRIM35Q9UPQ4 493 aa15.1■□□□□ 0.01
CASC19-227ENST00000641411 COLQQ9Y215 455 aaPredicted RBP15.1■□□□□ 0.01
CASC19-227ENST00000641411 SCUBE2Q9NQ36 999 aa15.07■□□□□ 0
CASC19-227ENST00000641411 VASPP50552 380 aaPredicted RBP15.06■□□□□ 0
CASC19-227ENST00000641411 DCAF8Q5TAQ9 597 aa15.02■□□□□ -0
CASC19-227ENST00000641411 TMEM106CQ9BVX2 250 aa15.02■□□□□ -0
CASC19-227ENST00000641411 POTEMA6NI47 508 aa15□□□□□ -0.01
CASC19-227ENST00000641411 SEC24BO95487 1268 aa15□□□□□ -0.01
CASC19-227ENST00000641411 PYGBP11216 843 aa14.99□□□□□ -0.01
CASC19-227ENST00000641411 LCE2DQ5TA82 110 aaPredicted RBP14.97□□□□□ -0.01
CASC19-227ENST00000641411 POTEGQ6S5H5 508 aa14.96□□□□□ -0.01
CASC19-227ENST00000641411 IRX5P78411 483 aaPredicted RBP14.93□□□□□ -0.02
CASC19-227ENST00000641411 GSE1Q14687 1217 aa14.91□□□□□ -0.02
CASC19-227ENST00000641411 KLHL34Q8N239 644 aa14.9□□□□□ -0.02
CASC19-227ENST00000641411 PCDHB8Q9UN66 801 aa14.9□□□□□ -0.02
CASC19-227ENST00000641411 CHRM1P11229 460 aaPredicted RBP14.88□□□□□ -0.03
CASC19-227ENST00000641411 PLCG2P16885 1265 aa14.85□□□□□ -0.03
CASC19-227ENST00000641411 ZNF467Q7Z7K2 595 aaPredicted RBP14.83□□□□□ -0.04
CASC19-227ENST00000641411 PLSCR2Q9NRY7 297 aa14.82□□□□□ -0.04
CASC19-227ENST00000641411 PCDH10Q9P2E7 1040 aa14.82□□□□□ -0.04
CASC19-227ENST00000641411 FAM163AQ96GL9 167 aaPredicted RBP14.81□□□□□ -0.04
CASC19-227ENST00000641411 OCEL1Q9H607 264 aa14.81□□□□□ -0.04
CASC19-227ENST00000641411 IFNLR1Q8IU57 520 aaPredicted RBP14.8□□□□□ -0.04
CASC19-227ENST00000641411 SPOCK2Q92563 424 aa14.74□□□□□ -0.05
CASC19-227ENST00000641411 SLAIN1Q8ND83 568 aa14.73□□□□□ -0.05
CASC19-227ENST00000641411 PDCD7Q8N8D1 485 aaKnown RBP14.71□□□□□ -0.05
CASC19-227ENST00000641411 PSEN1P49768 467 aa14.68□□□□□ -0.06
CASC19-227ENST00000641411 ILDR1Q86SU0 546 aaPredicted RBP14.65□□□□□ -0.06
CASC19-227ENST00000641411 CCDC180Q9P1Z9 1646 aa14.64□□□□□ -0.07
CASC19-227ENST00000641411 PDAP1Q13442 181 aaKnown RBP14.63□□□□□ -0.07
CASC19-227ENST00000641411 MKRN3Q13064 507 aaKnown RBP14.62□□□□□ -0.07
CASC19-227ENST00000641411 ST18O60284 1047 aa14.61□□□□□ -0.07
CASC19-227ENST00000641411 GOLGA2Q08379 1002 aa14.6□□□□□ -0.07
CASC19-227ENST00000641411 EIF2AK3Q9NZJ5 1116 aaKnown RBP14.59□□□□□ -0.07
CASC19-227ENST00000641411 CIZ1Q9ULV3 898 aaPredicted RBP14.59□□□□□ -0.07
CASC19-227ENST00000641411 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP14.55□□□□□ -0.087e-8■□□□□ 10.2
CASC19-227ENST00000641411 L3MBTL3Q96JM7 780 aaPredicted RBP14.54□□□□□ -0.08
CASC19-227ENST00000641411 TRIM41Q8WV44 630 aa14.52□□□□□ -0.09
CASC19-227ENST00000641411 TMEM121BQ9BXQ6 578 aaPredicted RBP14.51□□□□□ -0.09
CASC19-227ENST00000641411 SNPHO15079 494 aa14.5□□□□□ -0.09
CASC19-227ENST00000641411 CDAN1Q8IWY9 1227 aa14.49□□□□□ -0.09
CASC19-227ENST00000641411 C3orf67Q6ZVT6 689 aa14.48□□□□□ -0.09
CASC19-227ENST00000641411 CABP2Q9NPB3 220 aa14.47□□□□□ -0.09
CASC19-227ENST00000641411 DPY19L2Q6NUT2 758 aa14.43□□□□□ -0.1
CASC19-227ENST00000641411 BOLA1Q9Y3E2 137 aa14.36□□□□□ -0.11
CASC19-227ENST00000641411 RNF25Q96BH1 459 aaPredicted RBP14.35□□□□□ -0.11
CASC19-227ENST00000641411 EFCAB3Q8N7B9 438 aa14.32□□□□□ -0.12
CASC19-227ENST00000641411 MARVELD3Q96A59 401 aa14.32□□□□□ -0.12
CASC19-227ENST00000641411 RIOK3O14730 519 aaKnown RBP14.3□□□□□ -0.12
CASC19-227ENST00000641411 G3V3G9 751 aa14.26□□□□□ -0.13
CASC19-227ENST00000641411 HOXB3P14651 431 aaPredicted RBP14.25□□□□□ -0.13
CASC19-227ENST00000641411 VGFO15240 615 aaPredicted RBP14.24□□□□□ -0.13
CASC19-227ENST00000641411 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP14.23□□□□□ -0.13
CASC19-227ENST00000641411 ZFP91Q96JP5 570 aaPredicted RBP14.23□□□□□ -0.13
CASC19-227ENST00000641411 EMP3P54852 163 aa14.22□□□□□ -0.13
CASC19-227ENST00000641411 SOX12O15370 315 aa14.21□□□□□ -0.13
CASC19-227ENST00000641411 MS4A4AQ96JQ5 239 aa14.19□□□□□ -0.14
CASC19-227ENST00000641411 POTEB3A0JP26 581 aa14.18□□□□□ -0.14
CASC19-227ENST00000641411 POTEBQ6S5H4 581 aa14.18□□□□□ -0.14
CASC19-227ENST00000641411 SPNS2Q8IVW8 549 aa14.17□□□□□ -0.14
CASC19-227ENST00000641411 MICALL2Q8IY33 904 aa14.17□□□□□ -0.14
CASC19-227ENST00000641411 ZCCHC6Q5VYS8 1495 aaKnown RBP14.17□□□□□ -0.14
CASC19-227ENST00000641411 HS3ST6Q96QI5 342 aa14.15□□□□□ -0.14
CASC19-227ENST00000641411 TMEM92Q6UXU6 159 aa14.13□□□□□ -0.15
CASC19-227ENST00000641411 MMRN1Q13201 1228 aa14.12□□□□□ -0.15
CASC19-227ENST00000641411 KRTAP3-3Q9BYR6 98 aa14.12□□□□□ -0.15
CASC19-227ENST00000641411 KRTAP3-2Q9BYR7 98 aa14.12□□□□□ -0.15
CASC19-227ENST00000641411 PHF8Q9UPP1 1060 aa14.12□□□□□ -0.15
CASC19-227ENST00000641411 FAM205CA6NFA0 338 aa14.11□□□□□ -0.15
CASC19-227ENST00000641411 HOXB1P14653 301 aaPredicted RBP14.11□□□□□ -0.15
CASC19-227ENST00000641411 DOK7Q18PE1 504 aa14.11□□□□□ -0.15
CASC19-227ENST00000641411 FBXO22Q8NEZ5 403 aa14.06□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 8.9 ms