RNA–Protein interactions for RNA: ENST00000641336.1

SAMMSON-213, survival associated mitochondrial melanoma specific oncogenic non-coding RNA, humanhuman

BASIC

Gene SAMMSON, Length 1,521 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAMMSON-213ENST00000641336 ATMINO43313 823 aaPredicted RBP10.05□□□□□ -0.8
SAMMSON-213ENST00000641336 CREBZFQ9NS37 354 aa10.03□□□□□ -0.8
SAMMSON-213ENST00000641336 MMRN1Q13201 1228 aa10.02□□□□□ -0.8
SAMMSON-213ENST00000641336 SLC4A1APQ9BWU0 796 aaKnown RBP10.02□□□□□ -0.81
SAMMSON-213ENST00000641336 PAK3O75914 559 aaPredicted RBP10.01□□□□□ -0.81
SAMMSON-213ENST00000641336 ZBTB22O15209 634 aa9.96□□□□□ -0.82
SAMMSON-213ENST00000641336 SPNS2Q8IVW8 549 aa9.95□□□□□ -0.82
SAMMSON-213ENST00000641336 MS4A3Q96HJ5 214 aa9.95□□□□□ -0.82
SAMMSON-213ENST00000641336 POTEFA5A3E0 1075 aa9.92□□□□□ -0.82
SAMMSON-213ENST00000641336 ATN1P54259 1190 aaPredicted RBP9.87□□□□□ -0.83
SAMMSON-213ENST00000641336 ST18O60284 1047 aa9.84□□□□□ -0.83
SAMMSON-213ENST00000641336 MYT1Q01538 1121 aa9.81□□□□□ -0.84
SAMMSON-213ENST00000641336 NPM1P06748 294 aaKnown RBP eCLIP9.79□□□□□ -0.84
SAMMSON-213ENST00000641336 STAG3Q9UJ98 1225 aa9.78□□□□□ -0.84
SAMMSON-213ENST00000641336 MNX1P50219 401 aaPredicted RBP9.76□□□□□ -0.85
SAMMSON-213ENST00000641336 BMP2KQ9NSY1 1161 aaPredicted RBP9.72□□□□□ -0.85
SAMMSON-213ENST00000641336 COLQQ9Y215 455 aaPredicted RBP9.72□□□□□ -0.85
SAMMSON-213ENST00000641336 TTBK1Q5TCY1 1321 aaPredicted RBP9.72□□□□□ -0.85
SAMMSON-213ENST00000641336 SLAIN1Q8ND83 568 aa9.68□□□□□ -0.86
SAMMSON-213ENST00000641336 SEC24BO95487 1268 aa9.66□□□□□ -0.86
SAMMSON-213ENST00000641336 TMEM121BQ9BXQ6 578 aaPredicted RBP9.66□□□□□ -0.86
SAMMSON-213ENST00000641336 TRPC6Q9Y210 931 aa9.66□□□□□ -0.86
SAMMSON-213ENST00000641336 TIE1P35590 1138 aa9.63□□□□□ -0.87
SAMMSON-213ENST00000641336 KIF12Q96FN5 646 aa9.62□□□□□ -0.87
SAMMSON-213ENST00000641336 CCDC61Q9Y6R9 512 aa9.61□□□□□ -0.87
SAMMSON-213ENST00000641336 TSPYL2Q9H2G4 693 aaPredicted RBP9.58□□□□□ -0.88
SAMMSON-213ENST00000641336 MARVELD3Q96A59 401 aa9.56□□□□□ -0.88
SAMMSON-213ENST00000641336 TTLL13PA6NNM8 815 aa9.55□□□□□ -0.88
SAMMSON-213ENST00000641336 IER5LQ5T953 404 aa9.55□□□□□ -0.88
SAMMSON-213ENST00000641336 DAXXQ9UER7 740 aaPredicted RBP9.54□□□□□ -0.88
SAMMSON-213ENST00000641336 KRTAP3-3Q9BYR6 98 aa9.52□□□□□ -0.88
SAMMSON-213ENST00000641336 KRTAP3-2Q9BYR7 98 aa9.52□□□□□ -0.88
SAMMSON-213ENST00000641336 MAP3K13O43283 966 aa9.5□□□□□ -0.89
SAMMSON-213ENST00000641336 SNPHO15079 494 aa9.49□□□□□ -0.89
SAMMSON-213ENST00000641336 TRIM35Q9UPQ4 493 aa9.48□□□□□ -0.89
SAMMSON-213ENST00000641336 POTEB3A0JP26 581 aa9.42□□□□□ -0.9
SAMMSON-213ENST00000641336 POTEBQ6S5H4 581 aa9.42□□□□□ -0.9
SAMMSON-213ENST00000641336 EMP3P54852 163 aa9.4□□□□□ -0.91
SAMMSON-213ENST00000641336 HS3ST6Q96QI5 342 aa9.4□□□□□ -0.91
SAMMSON-213ENST00000641336 PLCG2P16885 1265 aa9.38□□□□□ -0.91
SAMMSON-213ENST00000641336 IRX5P78411 483 aaPredicted RBP9.34□□□□□ -0.91
SAMMSON-213ENST00000641336 FAM205CA6NFA0 338 aa9.33□□□□□ -0.92
SAMMSON-213ENST00000641336 ERICH6Q7L0X2 663 aa9.33□□□□□ -0.92
SAMMSON-213ENST00000641336 EIF2AK3Q9NZJ5 1116 aaKnown RBP9.33□□□□□ -0.92
SAMMSON-213ENST00000641336 SPDYE4A6NLX3 237 aa9.31□□□□□ -0.92
SAMMSON-213ENST00000641336 SGIP1Q9BQI5 828 aa9.31□□□□□ -0.92
SAMMSON-213ENST00000641336 RNF166Q96A37 237 aaPredicted RBP9.31□□□□□ -0.92
SAMMSON-213ENST00000641336 RASEFQ8IZ41 740 aa9.26□□□□□ -0.93
SAMMSON-213ENST00000641336 PCDHB13Q9Y5F0 798 aa9.26□□□□□ -0.93
SAMMSON-213ENST00000641336 OCEL1Q9H607 264 aa9.25□□□□□ -0.93
SAMMSON-213ENST00000641336 TMEM106CQ9BVX2 250 aa9.24□□□□□ -0.93
SAMMSON-213ENST00000641336 IFNL1Q8IU54 200 aa9.2□□□□□ -0.94
SAMMSON-213ENST00000641336 MYT1LQ9UL68 1186 aa9.17□□□□□ -0.94
SAMMSON-213ENST00000641336 EHMT2Q96KQ7 1210 aa9.11□□□□□ -0.95
SAMMSON-213ENST00000641336 PRKCSHP14314 528 aaPredicted RBP9.1□□□□□ -0.95
SAMMSON-213ENST00000641336 C3orf67Q6ZVT6 689 aa9.1□□□□□ -0.95
SAMMSON-213ENST00000641336 PDCD7Q8N8D1 485 aaKnown RBP9.05□□□□□ -0.96
SAMMSON-213ENST00000641336 PLEKHG5O94827 1062 aa9.03□□□□□ -0.96
SAMMSON-213ENST00000641336 HOXB1P14653 301 aaPredicted RBP9.03□□□□□ -0.96
SAMMSON-213ENST00000641336 L3MBTL3Q96JM7 780 aaPredicted RBP9.02□□□□□ -0.97
SAMMSON-213ENST00000641336 ERBB3P21860 1342 aa9.02□□□□□ -0.97
SAMMSON-213ENST00000641336 HOXB3P14651 431 aaPredicted RBP9.01□□□□□ -0.97
SAMMSON-213ENST00000641336 PTGER2P43116 358 aa9□□□□□ -0.97
SAMMSON-213ENST00000641336 PROM2Q8N271 834 aa9□□□□□ -0.97
SAMMSON-213ENST00000641336 MIER1Q8N108 512 aa8.99□□□□□ -0.97
SAMMSON-213ENST00000641336 RTN4Q9NQC3 1192 aaKnown RBP8.98□□□□□ -0.97
SAMMSON-213ENST00000641336 NUBP1P53384 320 aa8.96□□□□□ -0.97
SAMMSON-213ENST00000641336 ARXQ96QS3 562 aa8.96□□□□□ -0.97
SAMMSON-213ENST00000641336 AMER1Q5JTC6 1135 aaPredicted RBP8.95□□□□□ -0.98
SAMMSON-213ENST00000641336 VARS2Q5ST30 1063 aaKnown RBP8.94□□□□□ -0.98
SAMMSON-213ENST00000641336 PLA2G2EQ9NZK7 142 aa8.94□□□□□ -0.98
SAMMSON-213ENST00000641336 ZNF710Q8N1W2 664 aa8.92□□□□□ -0.98
SAMMSON-213ENST00000641336 ZNF687Q8N1G0 1237 aa8.91□□□□□ -0.98
SAMMSON-213ENST00000641336 FAM212AQ96EL1 285 aa8.87□□□□□ -0.99
SAMMSON-213ENST00000641336 DOK7Q18PE1 504 aa8.86□□□□□ -0.99
SAMMSON-213ENST00000641336 NISCHQ9Y2I1 1504 aa8.85□□□□□ -0.99
SAMMSON-213ENST00000641336 RANGAP1P46060 587 aaPredicted RBP8.85□□□□□ -0.99
SAMMSON-213ENST00000641336 PCDHB8Q9UN66 801 aa8.85□□□□□ -0.99
SAMMSON-213ENST00000641336 MKRN3Q13064 507 aaKnown RBP8.84□□□□□ -0.99
SAMMSON-213ENST00000641336 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP8.83□□□□□ -1
SAMMSON-213ENST00000641336 ANKRD13DQ6ZTN6 518 aa8.81□□□□□ -1
SAMMSON-213ENST00000641336 ILDR1Q86SU0 546 aaPredicted RBP8.8□□□□□ -1
SAMMSON-213ENST00000641336 ZBTB47Q9UFB7 747 aaPredicted RBP8.8□□□□□ -1
SAMMSON-213ENST00000641336 PLCD3Q8N3E9 789 aa8.79□□□□□ -1
SAMMSON-213ENST00000641336 RIMBP2O15034 1052 aa8.78□□□□□ -1
SAMMSON-213ENST00000641336 PYGBP11216 843 aa8.78□□□□□ -1
SAMMSON-213ENST00000641336 GOLGA2Q08379 1002 aa8.78□□□□□ -1
SAMMSON-213ENST00000641336 DPY19L2Q6NUT2 758 aa8.76□□□□□ -1.01
SAMMSON-213ENST00000641336 HCSTQ9UBK5 93 aa8.75□□□□□ -1.01
SAMMSON-213ENST00000641336 ZSWIM6Q9HCJ5 1215 aa8.74□□□□□ -1.01
SAMMSON-213ENST00000641336 BOLA1Q9Y3E2 137 aa8.74□□□□□ -1.01
SAMMSON-213ENST00000641336 LSM11P83369 360 aaKnown RBP eCLIP8.72□□□□□ -1.01
SAMMSON-213ENST00000641336 GPR153Q6NV75 609 aa8.7□□□□□ -1.02
SAMMSON-213ENST00000641336 G3V3G9 751 aa8.7□□□□□ -1.02
SAMMSON-213ENST00000641336 DCAF8Q5TAQ9 597 aa8.7□□□□□ -1.02
SAMMSON-213ENST00000641336 IRX2Q9BZI1 471 aaPredicted RBP8.7□□□□□ -1.02
SAMMSON-213ENST00000641336 EIF5BO60841 1220 aaKnown RBP8.69□□□□□ -1.02
SAMMSON-213ENST00000641336 RGS20O76081 388 aa8.65□□□□□ -1.02
SAMMSON-213ENST00000641336 HOMEZQ8IX15 550 aa8.64□□□□□ -1.03
SAMMSON-213ENST00000641336 ZNF467Q7Z7K2 595 aaPredicted RBP8.64□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms