RNA–Protein interactions for RNA: ENST00000641028.1

CASC19-206, Transcript of cancer susceptibility 19, humanhuman

BASIC

Gene CASC19, Length 1,430 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC19-206ENST00000641028 PCDH10Q9P2E7 1040 aa11.61□□□□□ -0.55
CASC19-206ENST00000641028 POTEB2H3BUK9 544 aa11.59□□□□□ -0.55
CASC19-206ENST00000641028 VASPP50552 380 aaPredicted RBP11.58□□□□□ -0.56
CASC19-206ENST00000641028 MAMSTRQ6ZN01 415 aa11.58□□□□□ -0.56
CASC19-206ENST00000641028 SLC39A7Q92504 469 aa11.56□□□□□ -0.56
CASC19-206ENST00000641028 METRNQ9UJH8 293 aa11.55□□□□□ -0.56
CASC19-206ENST00000641028 C7P10643 843 aa11.54□□□□□ -0.56
CASC19-206ENST00000641028 ASTLQ6HA08 431 aaPredicted RBP11.51□□□□□ -0.57
CASC19-206ENST00000641028 PELP1Q8IZL8 1130 aaKnown RBP11.5□□□□□ -0.57
CASC19-206ENST00000641028 SCUBE2Q9NQ36 999 aa11.47□□□□□ -0.57
CASC19-206ENST00000641028 MS4A3Q96HJ5 214 aa11.46□□□□□ -0.57
CASC19-206ENST00000641028 ATMINO43313 823 aaPredicted RBP11.45□□□□□ -0.58
CASC19-206ENST00000641028 MNX1P50219 401 aaPredicted RBP11.42□□□□□ -0.58
CASC19-206ENST00000641028 IFNLR1Q8IU57 520 aaPredicted RBP11.42□□□□□ -0.58
CASC19-206ENST00000641028 FAM163AQ96GL9 167 aaPredicted RBP11.39□□□□□ -0.59
CASC19-206ENST00000641028 TSPYL2Q9H2G4 693 aaPredicted RBP11.37□□□□□ -0.59
CASC19-206ENST00000641028 POTEJP0CG39 1038 aa11.33□□□□□ -0.6
CASC19-206ENST00000641028 PLEKHG5O94827 1062 aa11.32□□□□□ -0.6
CASC19-206ENST00000641028 ATN1P54259 1190 aaPredicted RBP11.31□□□□□ -0.6
CASC19-206ENST00000641028 PLCD3Q8N3E9 789 aa11.3□□□□□ -0.6
CASC19-206ENST00000641028 KLHL34Q8N239 644 aa11.29□□□□□ -0.6
CASC19-206ENST00000641028 MIER1Q8N108 512 aa11.28□□□□□ -0.6
CASC19-206ENST00000641028 CCDC61Q9Y6R9 512 aa11.28□□□□□ -0.6
CASC19-206ENST00000641028 SPOCK2Q92563 424 aa11.27□□□□□ -0.6
CASC19-206ENST00000641028 SEC24BO95487 1268 aa11.26□□□□□ -0.61
CASC19-206ENST00000641028 KIF12Q96FN5 646 aa11.26□□□□□ -0.61
CASC19-206ENST00000641028 LCE2DQ5TA82 110 aaPredicted RBP11.24□□□□□ -0.61
CASC19-206ENST00000641028 ZBTB47Q9UFB7 747 aaPredicted RBP11.24□□□□□ -0.61
CASC19-206ENST00000641028 TIE1P35590 1138 aa11.23□□□□□ -0.61
CASC19-206ENST00000641028 BMP2KQ9NSY1 1161 aaPredicted RBP11.23□□□□□ -0.61
CASC19-206ENST00000641028 SLC24A1O60721 1099 aa11.2□□□□□ -0.62
CASC19-206ENST00000641028 PKD2Q13563 968 aa11.18□□□□□ -0.62
CASC19-206ENST00000641028 MAP3K13O43283 966 aa11.17□□□□□ -0.62
CASC19-206ENST00000641028 CDAN1Q8IWY9 1227 aa11.16□□□□□ -0.62
CASC19-206ENST00000641028 POTEFA5A3E0 1075 aa11.14□□□□□ -0.63
CASC19-206ENST00000641028 IER5LQ5T953 404 aa11.13□□□□□ -0.63
CASC19-206ENST00000641028 TTLL13PA6NNM8 815 aa11.11□□□□□ -0.63
CASC19-206ENST00000641028 TRPC6Q9Y210 931 aa11.11□□□□□ -0.63
CASC19-206ENST00000641028 SGIP1Q9BQI5 828 aa11.09□□□□□ -0.63
CASC19-206ENST00000641028 COLQQ9Y215 455 aaPredicted RBP11.09□□□□□ -0.63
CASC19-206ENST00000641028 TRIM35Q9UPQ4 493 aa11.08□□□□□ -0.64
CASC19-206ENST00000641028 RASEFQ8IZ41 740 aa11.07□□□□□ -0.64
CASC19-206ENST00000641028 SLAIN1Q8ND83 568 aa11.07□□□□□ -0.64
CASC19-206ENST00000641028 ECM2O94769 699 aaPredicted RBP11.06□□□□□ -0.64
CASC19-206ENST00000641028 PCDHB13Q9Y5F0 798 aa11.05□□□□□ -0.64
CASC19-206ENST00000641028 DCAF8L2P0C7V8 631 aa11.02□□□□□ -0.64
CASC19-206ENST00000641028 PLCG2P16885 1265 aa11.02□□□□□ -0.64
CASC19-206ENST00000641028 TRIM41Q8WV44 630 aa11.01□□□□□ -0.65
CASC19-206ENST00000641028 ST18O60284 1047 aa11.01□□□□□ -0.65
CASC19-206ENST00000641028 CIZ1Q9ULV3 898 aaPredicted RBP11□□□□□ -0.65
CASC19-206ENST00000641028 GSE1Q14687 1217 aa10.98□□□□□ -0.65
CASC19-206ENST00000641028 SNPHO15079 494 aa10.96□□□□□ -0.65
CASC19-206ENST00000641028 TMEM121BQ9BXQ6 578 aaPredicted RBP10.96□□□□□ -0.65
CASC19-206ENST00000641028 NUBP1P53384 320 aa10.95□□□□□ -0.66
CASC19-206ENST00000641028 TMEM106CQ9BVX2 250 aa10.94□□□□□ -0.66
CASC19-206ENST00000641028 FAM212AQ96EL1 285 aa10.92□□□□□ -0.66
CASC19-206ENST00000641028 RGL2O15211 777 aa10.91□□□□□ -0.66
CASC19-206ENST00000641028 PLCB2Q00722 1185 aa10.91□□□□□ -0.66
CASC19-206ENST00000641028 IFNL1Q8IU54 200 aa10.91□□□□□ -0.66
CASC19-206ENST00000641028 MMRN1Q13201 1228 aa10.9□□□□□ -0.66
CASC19-206ENST00000641028 EIF2AK3Q9NZJ5 1116 aaKnown RBP10.88□□□□□ -0.67
CASC19-206ENST00000641028 DCAF8Q5TAQ9 597 aa10.87□□□□□ -0.67
CASC19-206ENST00000641028 SPNS2Q8IVW8 549 aa10.86□□□□□ -0.67
CASC19-206ENST00000641028 BBXQ8WY36 941 aaPredicted RBP10.85□□□□□ -0.67
CASC19-206ENST00000641028 OCEL1Q9H607 264 aa10.85□□□□□ -0.67
CASC19-206ENST00000641028 IRX5P78411 483 aaPredicted RBP10.84□□□□□ -0.67
CASC19-206ENST00000641028 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.83□□□□□ -0.68
CASC19-206ENST00000641028 TAOK2Q9UL54 1235 aa10.81□□□□□ -0.68
CASC19-206ENST00000641028 CHRM1P11229 460 aaPredicted RBP10.8□□□□□ -0.68
CASC19-206ENST00000641028 MARVELD3Q96A59 401 aa10.77□□□□□ -0.68
CASC19-206ENST00000641028 C3orf67Q6ZVT6 689 aa10.76□□□□□ -0.69
CASC19-206ENST00000641028 RIOK3O14730 519 aaKnown RBP10.75□□□□□ -0.69
CASC19-206ENST00000641028 CHGAP10645 457 aaKnown RBP10.75□□□□□ -0.69
CASC19-206ENST00000641028 RNF25Q96BH1 459 aaPredicted RBP10.75□□□□□ -0.69
CASC19-206ENST00000641028 EMP3P54852 163 aa10.74□□□□□ -0.69
CASC19-206ENST00000641028 GOLGA2Q08379 1002 aa10.74□□□□□ -0.69
CASC19-206ENST00000641028 HS6ST3Q8IZP7 471 aa10.74□□□□□ -0.69
CASC19-206ENST00000641028 HAP1P54257 671 aaPredicted RBP10.71□□□□□ -0.69
CASC19-206ENST00000641028 PYGBP11216 843 aa10.7□□□□□ -0.7
CASC19-206ENST00000641028 L3MBTL3Q96JM7 780 aaPredicted RBP10.7□□□□□ -0.7
CASC19-206ENST00000641028 VGFO15240 615 aaPredicted RBP10.69□□□□□ -0.7
CASC19-206ENST00000641028 DNAJC5Q9H3Z4 198 aa10.69□□□□□ -0.7
CASC19-206ENST00000641028 MKRN3Q13064 507 aaKnown RBP10.67□□□□□ -0.7
CASC19-206ENST00000641028 PAXIP1Q6ZW49 1069 aaPredicted RBP10.67□□□□□ -0.7
CASC19-206ENST00000641028 SPRYD3Q8NCJ5 442 aa10.67□□□□□ -0.7
CASC19-206ENST00000641028 CFAP44Q96MT7 982 aa10.65□□□□□ -0.7
CASC19-206ENST00000641028 PCDHB8Q9UN66 801 aa10.65□□□□□ -0.7
CASC19-206ENST00000641028 VSIG10Q8N0Z9 540 aa10.63□□□□□ -0.71
CASC19-206ENST00000641028 FAM205CA6NFA0 338 aa10.62□□□□□ -0.71
CASC19-206ENST00000641028 ZNF467Q7Z7K2 595 aaPredicted RBP10.62□□□□□ -0.71
CASC19-206ENST00000641028 HS3ST6Q96QI5 342 aa10.62□□□□□ -0.71
CASC19-206ENST00000641028 STK25O00506 426 aa10.6□□□□□ -0.71
CASC19-206ENST00000641028 G3V3G9 751 aa10.58□□□□□ -0.72
CASC19-206ENST00000641028 PDCD7Q8N8D1 485 aaKnown RBP10.58□□□□□ -0.72
CASC19-206ENST00000641028 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP10.58□□□□□ -0.72
CASC19-206ENST00000641028 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP10.56□□□□□ -0.72
CASC19-206ENST00000641028 ZFP91Q96JP5 570 aaPredicted RBP10.56□□□□□ -0.72
CASC19-206ENST00000641028 KRTAP3-3Q9BYR6 98 aa10.55□□□□□ -0.72
CASC19-206ENST00000641028 KRTAP3-2Q9BYR7 98 aa10.55□□□□□ -0.72
CASC19-206ENST00000641028 BCL11BQ9C0K0 894 aaPredicted RBP10.54□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 69.2 ms