RNA–Protein interactions for RNA: ENST00000640184.1

CASP1-217, Transcript of caspase 1, humanhuman

TSL 1 (best) BASIC

Gene CASP1, Length 327 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASP1-217ENST00000640184 HMGXB3Q12766 1538 aa7.99□□□□□ -1.13
CASP1-217ENST00000640184 AMER1Q5JTC6 1135 aaPredicted RBP7.97□□□□□ -1.13
CASP1-217ENST00000640184 CCDC88BA6NC98 1476 aa7.97□□□□□ -1.13
CASP1-217ENST00000640184 NCAPD3P42695 1498 aa7.94□□□□□ -1.14
CASP1-217ENST00000640184 VASPP50552 380 aaPredicted RBP7.94□□□□□ -1.14
CASP1-217ENST00000640184 PRDM2Q13029 1718 aa7.93□□□□□ -1.14
CASP1-217ENST00000640184 STAG3Q9UJ98 1225 aa7.92□□□□□ -1.14
CASP1-217ENST00000640184 PRKAR2AP13861 404 aaKnown RBP7.89□□□□□ -1.15
CASP1-217ENST00000640184 RTN4Q9NQC3 1192 aaKnown RBP7.88□□□□□ -1.15
CASP1-217ENST00000640184 ABCC8Q09428 1581 aa7.87□□□□□ -1.15
CASP1-217ENST00000640184 PLEKHG5O94827 1062 aa7.85□□□□□ -1.15
CASP1-217ENST00000640184 SPDYE1Q8NFV5 336 aaPredicted RBP7.85□□□□□ -1.15
CASP1-217ENST00000640184 CLEC11AQ9Y240 323 aa7.85□□□□□ -1.15
CASP1-217ENST00000640184 C19orf67A6NJJ6 358 aa7.84□□□□□ -1.15
CASP1-217ENST00000640184 PLCD3Q8N3E9 789 aa7.84□□□□□ -1.15
CASP1-217ENST00000640184 MIER1Q8N108 512 aa7.82□□□□□ -1.16
CASP1-217ENST00000640184 KLHL34Q8N239 644 aa7.82□□□□□ -1.16
CASP1-217ENST00000640184 TRIM41Q8WV44 630 aa7.81□□□□□ -1.16
CASP1-217ENST00000640184 GABBR2O75899 941 aa7.8□□□□□ -1.16
CASP1-217ENST00000640184 IFNLR1Q8IU57 520 aaPredicted RBP7.8□□□□□ -1.16
CASP1-217ENST00000640184 SYNJ1O43426 1573 aa7.79□□□□□ -1.16
CASP1-217ENST00000640184 LHX8Q68G74 356 aa7.78□□□□□ -1.16
CASP1-217ENST00000640184 ZBTB47Q9UFB7 747 aaPredicted RBP7.78□□□□□ -1.16
CASP1-217ENST00000640184 CFTRP13569 1480 aa7.78□□□□□ -1.16
CASP1-217ENST00000640184 BIVM-ERCC5R4GMW8 1640 aa7.78□□□□□ -1.16
CASP1-217ENST00000640184 WRNQ14191 1432 aaPredicted RBP eCLIP7.76□□□□□ -1.17
CASP1-217ENST00000640184 PRR29P0C7W0 189 aa7.75□□□□□ -1.17
CASP1-217ENST00000640184 LAMC3Q9Y6N6 1575 aa7.75□□□□□ -1.17
CASP1-217ENST00000640184 TOP2BQ02880 1626 aa7.74□□□□□ -1.17
CASP1-217ENST00000640184 CHADLQ6NUI6 762 aa7.74□□□□□ -1.17
CASP1-217ENST00000640184 SPOCK2Q92563 424 aa7.74□□□□□ -1.17
CASP1-217ENST00000640184 CADPSQ9ULU8 1353 aa7.73□□□□□ -1.17
CASP1-217ENST00000640184 KIF21AQ7Z4S6 1674 aa7.73□□□□□ -1.17
CASP1-217ENST00000640184 NESP48681 1621 aa7.71□□□□□ -1.17
CASP1-217ENST00000640184 CUX1P39880 1505 aa7.71□□□□□ -1.18
CASP1-217ENST00000640184 FAM9AQ8IZU1 332 aaPredicted RBP7.69□□□□□ -1.18
CASP1-217ENST00000640184 FANCD2Q9BXW9 1451 aa7.68□□□□□ -1.18
CASP1-217ENST00000640184 CEP164Q9UPV0 1460 aa7.66□□□□□ -1.18
CASP1-217ENST00000640184 DNMBPQ6XZF7 1577 aa7.66□□□□□ -1.18
CASP1-217ENST00000640184 SOGA1O94964 1423 aa7.65□□□□□ -1.18
CASP1-217ENST00000640184 POTEIP0CG38 1075 aa7.65□□□□□ -1.18
CASP1-217ENST00000640184 EEA1Q15075 1411 aa7.65□□□□□ -1.18
CASP1-217ENST00000640184 RUSC2Q8N2Y8 1516 aa7.63□□□□□ -1.19
CASP1-217ENST00000640184 PDS5BQ9NTI5 1447 aa7.63□□□□□ -1.19
CASP1-217ENST00000640184 FGD5Q6ZNL6 1462 aa7.62□□□□□ -1.19
CASP1-217ENST00000640184 LOC105371045A0A1W2PR82 267 aa7.62□□□□□ -1.19
CASP1-217ENST00000640184 CD44P16070 742 aaKnown RBP7.62□□□□□ -1.19
CASP1-217ENST00000640184 CREBZFQ9NS37 354 aa7.62□□□□□ -1.19
CASP1-217ENST00000640184 CIZ1Q9ULV3 898 aaPredicted RBP7.62□□□□□ -1.19
CASP1-217ENST00000640184 WDR97A6NE52 1622 aa7.62□□□□□ -1.19
CASP1-217ENST00000640184 KIF21BO75037 1637 aa7.62□□□□□ -1.19
CASP1-217ENST00000640184 TOPBP1Q92547 1522 aa7.62□□□□□ -1.19
CASP1-217ENST00000640184 URB2Q14146 1524 aaKnown RBP7.6□□□□□ -1.19
CASP1-217ENST00000640184 ECM2O94769 699 aaPredicted RBP7.59□□□□□ -1.19
CASP1-217ENST00000640184 NPM1P06748 294 aaKnown RBP eCLIP7.59□□□□□ -1.19
CASP1-217ENST00000640184 PKD2Q13563 968 aa7.59□□□□□ -1.19
CASP1-217ENST00000640184 FARP1Q9Y4F1 1045 aaPredicted RBP7.59□□□□□ -1.19
CASP1-217ENST00000640184 POLA1P09884 1462 aaPredicted RBP7.57□□□□□ -1.2
CASP1-217ENST00000640184 GOLGA3Q08378 1498 aa7.57□□□□□ -1.2
CASP1-217ENST00000640184 CLCN6P51797 869 aa7.57□□□□□ -1.2
CASP1-217ENST00000640184 GSE1Q14687 1217 aa7.57□□□□□ -1.2
CASP1-217ENST00000640184 MRC2Q9UBG0 1479 aa7.56□□□□□ -1.2
CASP1-217ENST00000640184 THOC2Q8NI27 1593 aaKnown RBP7.56□□□□□ -1.2
CASP1-217ENST00000640184 KIF27Q86VH2 1401 aa7.56□□□□□ -1.2
CASP1-217ENST00000640184 FAM212AQ96EL1 285 aa7.56□□□□□ -1.2
CASP1-217ENST00000640184 CUX2O14529 1486 aa7.55□□□□□ -1.2
CASP1-217ENST00000640184 PBRM1Q86U86 1689 aa7.55□□□□□ -1.2
CASP1-217ENST00000640184 ERCC6Q03468 1493 aa7.55□□□□□ -1.2
CASP1-217ENST00000640184 WDR62O43379 1518 aa7.54□□□□□ -1.2
CASP1-217ENST00000640184 DCAF8Q5TAQ9 597 aa7.54□□□□□ -1.2
CASP1-217ENST00000640184 RAD54L2Q9Y4B4 1467 aa7.54□□□□□ -1.2
CASP1-217ENST00000640184 ERICH3Q5RHP9 1530 aa7.53□□□□□ -1.2
CASP1-217ENST00000640184 ABCA10Q8WWZ4 1543 aa7.53□□□□□ -1.2
CASP1-217ENST00000640184 TARBP1Q13395 1621 aaKnown RBP7.53□□□□□ -1.2
CASP1-217ENST00000640184 ABCA5Q8WWZ7 1642 aa7.53□□□□□ -1.2
CASP1-217ENST00000640184 MNX1P50219 401 aaPredicted RBP7.53□□□□□ -1.2
CASP1-217ENST00000640184 NUBP1P53384 320 aa7.53□□□□□ -1.2
CASP1-217ENST00000640184 PLSCR2Q9NRY7 297 aa7.53□□□□□ -1.2
CASP1-217ENST00000640184 CUL7Q14999 1698 aa7.53□□□□□ -1.2
CASP1-217ENST00000640184 DCBLD2Q96PD2 775 aa7.52□□□□□ -1.21
CASP1-217ENST00000640184 RAPGEF2Q9Y4G8 1499 aa7.51□□□□□ -1.21
CASP1-217ENST00000640184 CTTNBP2Q8WZ74 1663 aa7.51□□□□□ -1.21
CASP1-217ENST00000640184 ZNF579Q8NAF0 562 aaKnown RBP7.5□□□□□ -1.21
CASP1-217ENST00000640184 PRXQ9BXM0 1461 aa7.49□□□□□ -1.21
CASP1-217ENST00000640184 TNIKQ9UKE5 1360 aa7.49□□□□□ -1.21
CASP1-217ENST00000640184 UBTFP17480 764 aaKnown RBP7.49□□□□□ -1.21
CASP1-217ENST00000640184 CEP162Q5TB80 1403 aa7.49□□□□□ -1.21
CASP1-217ENST00000640184 RASEFQ8IZ41 740 aa7.47□□□□□ -1.21
CASP1-217ENST00000640184 ZRANB1Q9UGI0 708 aa7.47□□□□□ -1.21
CASP1-217ENST00000640184 EIF4G3O43432 1585 aaKnown RBP7.46□□□□□ -1.21
CASP1-217ENST00000640184 PAK3O75914 559 aaPredicted RBP7.46□□□□□ -1.22
CASP1-217ENST00000640184 GAPVD1Q14C86 1478 aa7.46□□□□□ -1.22
CASP1-217ENST00000640184 IFT140Q96RY7 1462 aa7.45□□□□□ -1.22
CASP1-217ENST00000640184 RGL2O15211 777 aa7.45□□□□□ -1.22
CASP1-217ENST00000640184 TAOK2Q9UL54 1235 aa7.45□□□□□ -1.22
CASP1-217ENST00000640184 IGF1RP08069 1367 aa7.45□□□□□ -1.22
CASP1-217ENST00000640184 SLC24A1O60721 1099 aa7.44□□□□□ -1.22
CASP1-217ENST00000640184 TSPYL2Q9H2G4 693 aaPredicted RBP7.44□□□□□ -1.22
CASP1-217ENST00000640184 ADAMTS12P58397 1594 aa7.44□□□□□ -1.22
CASP1-217ENST00000640184 TDRD9Q8NDG6 1382 aaKnown RBP7.44□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 87.1 ms