RNA–Protein interactions for RNA: ENST00000636227.1

ARID1B-214, Transcript of AT-rich interaction domain 1B, humanhuman

TSL 5

Gene ARID1B, Length 6,386 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARID1B-214ENST00000636227 CHMP7Q8WUX9 453 aaPredicted RBP12.42□□□□□ -0.42
ARID1B-214ENST00000636227 ANP32BQ92688 251 aaKnown RBP12.42□□□□□ -0.42
ARID1B-214ENST00000636227 RRP7BPQ9NSQ0 103 aa12.41□□□□□ -0.42
ARID1B-214ENST00000636227 TRHP20396 242 aaPredicted RBP12.4□□□□□ -0.42
ARID1B-214ENST00000636227 NPHP1O15259 732 aa12.4□□□□□ -0.42
ARID1B-214ENST00000636227 LAS1LQ9Y4W2 734 aaKnown RBP12.4□□□□□ -0.43
ARID1B-214ENST00000636227 UPF2Q9HAU5 1272 aaKnown RBP12.39□□□□□ -0.43
ARID1B-214ENST00000636227 SOX12O15370 315 aa12.38□□□□□ -0.43
ARID1B-214ENST00000636227 SCRIBQ14160 1630 aa12.38□□□□□ -0.43
ARID1B-214ENST00000636227 AMER1Q5JTC6 1135 aaPredicted RBP12.37□□□□□ -0.43
ARID1B-214ENST00000636227 TNNT2P45379 298 aaPredicted RBP12.37□□□□□ -0.43
ARID1B-214ENST00000636227 NEUROD2Q15784 382 aa12.36□□□□□ -0.43
ARID1B-214ENST00000636227 CCDC136Q96JN2 1154 aa12.35□□□□□ -0.43
ARID1B-214ENST00000636227 MLECQ14165 292 aa12.35□□□□□ -0.43
ARID1B-214ENST00000636227 CDK11BP21127 795 aaKnown RBP12.34□□□□□ -0.43
ARID1B-214ENST00000636227 MRS2Q9HD23 443 aa12.33□□□□□ -0.44
ARID1B-214ENST00000636227 TSPY4P0CV99 314 aa12.33□□□□□ -0.44
ARID1B-214ENST00000636227 TSPY10P0CW01 314 aa12.33□□□□□ -0.44
ARID1B-214ENST00000636227 ACIN1Q9UKV3 1341 aaKnown RBP12.31□□□□□ -0.44
ARID1B-214ENST00000636227 MYH16Q9H6N6 1097 aa12.29□□□□□ -0.44
ARID1B-214ENST00000636227 GOLGA6L2Q8N9W4 650 aaPredicted RBP12.29□□□□□ -0.44
ARID1B-214ENST00000636227 NCLP19338 710 aaKnown RBP12.28□□□□□ -0.44
ARID1B-214ENST00000636227 SAFB2Q14151 953 aaKnown RBP eCLIP12.25□□□□□ -0.45
ARID1B-214ENST00000636227 MTUS2Q5JR59 1369 aa12.23□□□□□ -0.45
ARID1B-214ENST00000636227 NAP1L2Q9ULW6 460 aaPredicted RBP12.23□□□□□ -0.45
ARID1B-214ENST00000636227 CCDC180Q9P1Z9 1646 aa12.21□□□□□ -0.45
ARID1B-214ENST00000636227 CLSTN1O94985 981 aa12.2□□□□□ -0.46
ARID1B-214ENST00000636227 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.2□□□□□ -0.46
ARID1B-214ENST00000636227 ISY1Q9ULR0 285 aaKnown RBP12.19□□□□□ -0.46
ARID1B-214ENST00000636227 CC2D1BQ5T0F9 858 aaKnown RBP12.18□□□□□ -0.46
ARID1B-214ENST00000636227 POGKQ9P215 609 aa12.17□□□□□ -0.46
ARID1B-214ENST00000636227 ZNF330Q9Y3S2 320 aaPredicted RBP12.17□□□□□ -0.46
ARID1B-214ENST00000636227 MIER1Q8N108 512 aa12.16□□□□□ -0.46
ARID1B-214ENST00000636227 FRAT1Q92837 279 aaPredicted RBP12.16□□□□□ -0.46
ARID1B-214ENST00000636227 PLCB2Q00722 1185 aa12.16□□□□□ -0.46
ARID1B-214ENST00000636227 ZCCHC6Q5VYS8 1495 aaKnown RBP12.15□□□□□ -0.46
ARID1B-214ENST00000636227 U2SURPO15042 1029 aaKnown RBP12.15□□□□□ -0.46
ARID1B-214ENST00000636227 OS9Q13438 667 aaPredicted RBP12.14□□□□□ -0.47
ARID1B-214ENST00000636227 FTSJ3Q8IY81 847 aaKnown RBP12.13□□□□□ -0.47
ARID1B-214ENST00000636227 PLEKHD1A6NEE1 506 aa12.12□□□□□ -0.47
ARID1B-214ENST00000636227 ANO8Q9HCE9 1232 aaPredicted RBP12.12□□□□□ -0.47
ARID1B-214ENST00000636227 GOLGA2Q08379 1002 aa12.12□□□□□ -0.47
ARID1B-214ENST00000636227 STK26Q9P289 416 aa12.11□□□□□ -0.47
ARID1B-214ENST00000636227 SPRYD3Q8NCJ5 442 aa12.11□□□□□ -0.47
ARID1B-214ENST00000636227 RGS3P49796 1198 aa12.1□□□□□ -0.47
ARID1B-214ENST00000636227 PAK3O75914 559 aaPredicted RBP12.1□□□□□ -0.47
ARID1B-214ENST00000636227 CCDC9Q9Y3X0 531 aaKnown RBP12.1□□□□□ -0.47
ARID1B-214ENST00000636227 APBB1O00213 710 aa12.09□□□□□ -0.47
ARID1B-214ENST00000636227 EIF4G2P78344 907 aaKnown RBP eCLIP12.09□□□□□ -0.47
ARID1B-214ENST00000636227 KNSTRNQ9Y448 316 aa12.09□□□□□ -0.47
ARID1B-214ENST00000636227 DCAF1Q9Y4B6 1507 aa12.09□□□□□ -0.47
ARID1B-214ENST00000636227 ZRSR1Q15695 479 aaKnown RBP12.08□□□□□ -0.48
ARID1B-214ENST00000636227 CARD11Q9BXL7 1154 aa12.08□□□□□ -0.48
ARID1B-214ENST00000636227 RTN4Q9NQC3 1192 aaKnown RBP12.08□□□□□ -0.48
ARID1B-214ENST00000636227 PTMAP06454 111 aaKnown RBP12.07□□□□□ -0.48
ARID1B-214ENST00000636227 FGD1P98174 961 aa12.07□□□□□ -0.48
ARID1B-214ENST00000636227 CFDP1Q9UEE9 299 aaPredicted RBP12.06□□□□□ -0.48
ARID1B-214ENST00000636227 MAPK8IP3Q9UPT6 1336 aa12.06□□□□□ -0.48
ARID1B-214ENST00000636227 CFAP53Q96M91 514 aa12.06□□□□□ -0.48
ARID1B-214ENST00000636227 NUTM2DQ5VT03 806 aaPredicted RBP12.05□□□□□ -0.48
ARID1B-214ENST00000636227 DNTTIP2Q5QJE6 756 aaKnown RBP12.05□□□□□ -0.48
ARID1B-214ENST00000636227 SUPT16HQ9Y5B9 1047 aaKnown RBP12.04□□□□□ -0.48
ARID1B-214ENST00000636227 ERCC6Q03468 1493 aa12.04□□□□□ -0.48
ARID1B-214ENST00000636227 SIN3AQ96ST3 1273 aa12.04□□□□□ -0.48
ARID1B-214ENST00000636227 KCNJ4P48050 445 aa12.04□□□□□ -0.48
ARID1B-214ENST00000636227 SRPK2P78362 688 aaKnown RBP12.03□□□□□ -0.48
ARID1B-214ENST00000636227 PDE4CQ08493 712 aa12.03□□□□□ -0.48
ARID1B-214ENST00000636227 TRIM44Q96DX7 344 aaPredicted RBP12.02□□□□□ -0.49
ARID1B-214ENST00000636227 GGT6Q6P531 493 aa12.02□□□□□ -0.49
ARID1B-214ENST00000636227 CASC1Q6TDU7 716 aa12.01□□□□□ -0.49
ARID1B-214ENST00000636227 NUTM2FA1L443 756 aa12.01□□□□□ -0.49
ARID1B-214ENST00000636227 CSB-PGBD3P0DP91 1061 aa11.99□□□□□ -0.49
ARID1B-214ENST00000636227 ERICH6BQ5W0A0 696 aa11.99□□□□□ -0.49
ARID1B-214ENST00000636227 FOXD1Q16676 465 aa11.98□□□□□ -0.49
ARID1B-214ENST00000636227 BECN1Q14457 450 aa11.98□□□□□ -0.49
ARID1B-214ENST00000636227 DCAF11Q8TEB1 546 aa11.97□□□□□ -0.49
ARID1B-214ENST00000636227 EIF4G1Q04637 1599 aaKnown RBP11.96□□□□□ -0.49
ARID1B-214ENST00000636227 CLIP1P30622 1438 aa11.94□□□□□ -0.5
ARID1B-214ENST00000636227 GOLGA6L22H0YM25 854 aa11.94□□□□□ -0.5
ARID1B-214ENST00000636227 HSP90AB1P08238 724 aaKnown RBP11.94□□□□□ -0.5
ARID1B-214ENST00000636227 CHMP3Q9Y3E7 222 aa11.93□□□□□ -0.5
ARID1B-214ENST00000636227 NUDCQ9Y266 331 aa11.93□□□□□ -0.5
ARID1B-214ENST00000636227 B4GALNT3Q6L9W6 998 aa11.92□□□□□ -0.5
ARID1B-214ENST00000636227 PRM3Q9NNZ6 103 aa11.92□□□□□ -0.5
ARID1B-214ENST00000636227 MYO15BQ96JP2 1530 aa11.92□□□□□ -0.5
ARID1B-214ENST00000636227 LTV1Q96GA3 475 aaPredicted RBP11.91□□□□□ -0.5
ARID1B-214ENST00000636227 ARID3AQ99856 593 aa11.91□□□□□ -0.5
ARID1B-214ENST00000636227 GLIPR1L2Q4G1C9 344 aa11.88□□□□□ -0.51
ARID1B-214ENST00000636227 RTF1Q92541 710 aaKnown RBP11.88□□□□□ -0.51
ARID1B-214ENST00000636227 MSH5O43196 834 aa11.88□□□□□ -0.51
ARID1B-214ENST00000636227 DDRGK1Q96HY6 314 aa11.88□□□□□ -0.51
ARID1B-214ENST00000636227 NAP1L5Q96NT1 182 aaPredicted RBP11.87□□□□□ -0.51
ARID1B-214ENST00000636227 MORC1Q86VD1 984 aa11.87□□□□□ -0.51
ARID1B-214ENST00000636227 GNL2Q13823 731 aaKnown RBP11.87□□□□□ -0.51
ARID1B-214ENST00000636227 KLHL34Q8N239 644 aa11.86□□□□□ -0.51
ARID1B-214ENST00000636227 G3V3G9 751 aa11.85□□□□□ -0.51
ARID1B-214ENST00000636227 DCAF8Q5TAQ9 597 aa11.85□□□□□ -0.51
ARID1B-214ENST00000636227 CDCA8Q53HL2 280 aa11.85□□□□□ -0.51
ARID1B-214ENST00000636227 NOL8Q76FK4 1167 aaKnown RBP11.85□□□□□ -0.51
ARID1B-214ENST00000636227 RB1CC1Q8TDY2 1594 aa11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms