RNA–Protein interactions for RNA: ENST00000635227.1

LINC01108-202, Transcript of long intergenic non-protein coding RNA 1108, humanhuman

TSL 3 BASIC

Gene LINC01108, Length 776 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01108-202ENST00000635227 ECM2O94769 699 aaPredicted RBP17.47■□□□□ 0.39
LINC01108-202ENST00000635227 PAK3O75914 559 aaPredicted RBP17.45■□□□□ 0.38
LINC01108-202ENST00000635227 HAX1O00165 279 aa17.43■□□□□ 0.38
LINC01108-202ENST00000635227 CCDC61Q9Y6R9 512 aa17.43■□□□□ 0.38
LINC01108-202ENST00000635227 ZRANB1Q9UGI0 708 aa17.42■□□□□ 0.38
LINC01108-202ENST00000635227 PYGBP11216 843 aa17.4■□□□□ 0.38
LINC01108-202ENST00000635227 TRIM41Q8WV44 630 aa17.39■□□□□ 0.37
LINC01108-202ENST00000635227 EVX2Q03828 476 aa17.36■□□□□ 0.37
LINC01108-202ENST00000635227 RGL2O15211 777 aa17.33■□□□□ 0.36
LINC01108-202ENST00000635227 CHRM1P11229 460 aaPredicted RBP17.33■□□□□ 0.36
LINC01108-202ENST00000635227 PHF12Q96QT6 1004 aa17.3■□□□□ 0.36
LINC01108-202ENST00000635227 RNF25Q96BH1 459 aaPredicted RBP17.29■□□□□ 0.36
LINC01108-202ENST00000635227 ZNF579Q8NAF0 562 aaKnown RBP17.27■□□□□ 0.36
LINC01108-202ENST00000635227 KIF12Q96FN5 646 aa17.24■□□□□ 0.35
LINC01108-202ENST00000635227 MAP3K13O43283 966 aa17.22■□□□□ 0.35
LINC01108-202ENST00000635227 DCAF8L2P0C7V8 631 aa17.2■□□□□ 0.34
LINC01108-202ENST00000635227 RIOK3O14730 519 aaKnown RBP17.17■□□□□ 0.34
LINC01108-202ENST00000635227 PCDHB13Q9Y5F0 798 aa17.17■□□□□ 0.34
LINC01108-202ENST00000635227 PCDHB8Q9UN66 801 aa17.15■□□□□ 0.34
LINC01108-202ENST00000635227 IFNL1Q8IU54 200 aa17.13■□□□□ 0.33
LINC01108-202ENST00000635227 ZNF467Q7Z7K2 595 aaPredicted RBP17.11■□□□□ 0.33
LINC01108-202ENST00000635227 SGIP1Q9BQI5 828 aa17.11■□□□□ 0.33
LINC01108-202ENST00000635227 MS4A3Q96HJ5 214 aa17.09■□□□□ 0.33
LINC01108-202ENST00000635227 VGFO15240 615 aaPredicted RBP17.04■□□□□ 0.32
LINC01108-202ENST00000635227 GALR2O43603 387 aaPredicted RBP17.03■□□□□ 0.32
LINC01108-202ENST00000635227 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP17■□□□□ 0.31
LINC01108-202ENST00000635227 ZFP91Q96JP5 570 aaPredicted RBP17■□□□□ 0.31
LINC01108-202ENST00000635227 TRPC6Q9Y210 931 aa17■□□□□ 0.31
LINC01108-202ENST00000635227 TAOK2Q9UL54 1235 aa16.99■□□□□ 0.31
LINC01108-202ENST00000635227 GABBR2O75899 941 aa16.98■□□□□ 0.31
LINC01108-202ENST00000635227 CHGAP10645 457 aaKnown RBP16.98■□□□□ 0.31
LINC01108-202ENST00000635227 PDAP1Q13442 181 aaKnown RBP16.98■□□□□ 0.31
LINC01108-202ENST00000635227 CLCN6P51797 869 aa16.97■□□□□ 0.31
LINC01108-202ENST00000635227 PSEN1P49768 467 aa16.96■□□□□ 0.31
LINC01108-202ENST00000635227 SP7Q8TDD2 431 aaPredicted RBP16.94■□□□□ 0.3
LINC01108-202ENST00000635227 STK25O00506 426 aa16.93■□□□□ 0.3
LINC01108-202ENST00000635227 HS6ST3Q8IZP7 471 aa16.92■□□□□ 0.3
LINC01108-202ENST00000635227 BCL11BQ9C0K0 894 aaPredicted RBP16.9■□□□□ 0.3
LINC01108-202ENST00000635227 STK24Q9Y6E0 443 aa16.87■□□□□ 0.29
LINC01108-202ENST00000635227 TMEM106CQ9BVX2 250 aa16.85■□□□□ 0.29
LINC01108-202ENST00000635227 TIE1P35590 1138 aa16.83■□□□□ 0.28
LINC01108-202ENST00000635227 BMP2KQ9NSY1 1161 aaPredicted RBP16.83■□□□□ 0.28
LINC01108-202ENST00000635227 TTLL13PA6NNM8 815 aa16.8■□□□□ 0.28
LINC01108-202ENST00000635227 BBXQ8WY36 941 aaPredicted RBP16.78■□□□□ 0.28
LINC01108-202ENST00000635227 CABP2Q9NPB3 220 aa16.76■□□□□ 0.27
LINC01108-202ENST00000635227 DNAJC5Q9H3Z4 198 aa16.75■□□□□ 0.27
LINC01108-202ENST00000635227 NKX1-1Q15270 411 aaPredicted RBP16.73■□□□□ 0.27
LINC01108-202ENST00000635227 ATMINO43313 823 aaPredicted RBP16.72■□□□□ 0.27
LINC01108-202ENST00000635227 ATN1P54259 1190 aaPredicted RBP16.72■□□□□ 0.27
LINC01108-202ENST00000635227 ASTLQ6HA08 431 aaPredicted RBP16.72■□□□□ 0.27
LINC01108-202ENST00000635227 DCBLD2Q96PD2 775 aa16.71■□□□□ 0.27
LINC01108-202ENST00000635227 EFCAB3Q8N7B9 438 aa16.69■□□□□ 0.26
LINC01108-202ENST00000635227 TRIM35Q9UPQ4 493 aa16.69■□□□□ 0.26
LINC01108-202ENST00000635227 ZBTB4Q9P1Z0 1013 aaPredicted RBP16.67■□□□□ 0.26
LINC01108-202ENST00000635227 POTEIP0CG38 1075 aa16.66■□□□□ 0.26
LINC01108-202ENST00000635227 GOLGA2Q08379 1002 aa16.65■□□□□ 0.26
LINC01108-202ENST00000635227 PELP1Q8IZL8 1130 aaKnown RBP16.63■□□□□ 0.25
LINC01108-202ENST00000635227 MKRN3Q13064 507 aaKnown RBP16.59■□□□□ 0.25
LINC01108-202ENST00000635227 PAXIP1Q6ZW49 1069 aaPredicted RBP16.59■□□□□ 0.25
LINC01108-202ENST00000635227 MFRPQ9BY79 579 aa16.59■□□□□ 0.25
LINC01108-202ENST00000635227 CFAP44Q96MT7 982 aa16.57■□□□□ 0.24
LINC01108-202ENST00000635227 SOX12O15370 315 aa16.56■□□□□ 0.24
LINC01108-202ENST00000635227 GTPBP6O43824 516 aaPredicted RBP16.56■□□□□ 0.24
LINC01108-202ENST00000635227 PLCB2Q00722 1185 aa16.56■□□□□ 0.24
LINC01108-202ENST00000635227 PHF8Q9UPP1 1060 aa16.56■□□□□ 0.24
LINC01108-202ENST00000635227 SPRYD3Q8NCJ5 442 aa16.55■□□□□ 0.24
LINC01108-202ENST00000635227 FBXO22Q8NEZ5 403 aa16.51■□□□□ 0.23
LINC01108-202ENST00000635227 NLRP6P59044 892 aa16.49■□□□□ 0.23
LINC01108-202ENST00000635227 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.49■□□□□ 0.23
LINC01108-202ENST00000635227 IER5LQ5T953 404 aa16.48■□□□□ 0.23
LINC01108-202ENST00000635227 MS4A4AQ96JQ5 239 aa16.47■□□□□ 0.23
LINC01108-202ENST00000635227 IRX5P78411 483 aaPredicted RBP16.46■□□□□ 0.23
LINC01108-202ENST00000635227 ILDR1Q86SU0 546 aaPredicted RBP16.46■□□□□ 0.23
LINC01108-202ENST00000635227 SLC39A7Q92504 469 aa16.44■□□□□ 0.22
LINC01108-202ENST00000635227 RYDENQ9NUL5 291 aaKnown RBP16.44■□□□□ 0.22
LINC01108-202ENST00000635227 METRNQ9UJH8 293 aa16.42■□□□□ 0.22
LINC01108-202ENST00000635227 C7P10643 843 aa16.41■□□□□ 0.22
LINC01108-202ENST00000635227 PDCD7Q8N8D1 485 aaKnown RBP16.41■□□□□ 0.22
LINC01108-202ENST00000635227 COLQQ9Y215 455 aaPredicted RBP16.41■□□□□ 0.22
LINC01108-202ENST00000635227 PPP1R37O75864 691 aa16.4■□□□□ 0.22
LINC01108-202ENST00000635227 POTEFA5A3E0 1075 aa16.39■□□□□ 0.21
LINC01108-202ENST00000635227 OCEL1Q9H607 264 aa16.39■□□□□ 0.21
LINC01108-202ENST00000635227 DPY19L2Q6NUT2 758 aa16.38■□□□□ 0.21
LINC01108-202ENST00000635227 SEC24BO95487 1268 aa16.37■□□□□ 0.21
LINC01108-202ENST00000635227 PLCG2P16885 1265 aa16.36■□□□□ 0.21
LINC01108-202ENST00000635227 HAP1P54257 671 aaPredicted RBP16.33■□□□□ 0.2
LINC01108-202ENST00000635227 TSHZ2Q9NRE2 1034 aa16.3■□□□□ 0.2
LINC01108-202ENST00000635227 SLC24A1O60721 1099 aa16.25■□□□□ 0.19
LINC01108-202ENST00000635227 BOLA1Q9Y3E2 137 aa16.19■□□□□ 0.18
LINC01108-202ENST00000635227 CADPS2Q86UW7 1296 aa16.18■□□□□ 0.18
LINC01108-202ENST00000635227 MICALL2Q8IY33 904 aa16.18■□□□□ 0.18
LINC01108-202ENST00000635227 L3MBTL3Q96JM7 780 aaPredicted RBP16.16■□□□□ 0.18
LINC01108-202ENST00000635227 POTEB2H3BUK9 544 aa16.15■□□□□ 0.18
LINC01108-202ENST00000635227 TMEM121BQ9BXQ6 578 aaPredicted RBP16.15■□□□□ 0.18
LINC01108-202ENST00000635227 G3V3G9 751 aa16.12■□□□□ 0.17
LINC01108-202ENST00000635227 POTEJP0CG39 1038 aa16.1■□□□□ 0.17
LINC01108-202ENST00000635227 KDM2AQ9Y2K7 1162 aa16.07■□□□□ 0.16
LINC01108-202ENST00000635227 VSIG10Q8N0Z9 540 aa16.03■□□□□ 0.16
LINC01108-202ENST00000635227 NCKAP5LQ9HCH0 1330 aa16.02■□□□□ 0.16
LINC01108-202ENST00000635227 TMEM92Q6UXU6 159 aa15.99■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms