RNA–Protein interactions for RNA: ENST00000633363.1

LINC01002-227, Transcript of long intergenic non-protein coding RNA 1002, humanhuman

TSL 1 (best) BASIC

Gene LINC01002, Length 541 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01002-227ENST00000633363 MYCNP04198 464 aaPredicted RBP7.44□□□□□ -1.22
LINC01002-227ENST00000633363 CADPSQ9ULU8 1353 aa7.44□□□□□ -1.22
LINC01002-227ENST00000633363 CD44P16070 742 aaKnown RBP7.43□□□□□ -1.22
LINC01002-227ENST00000633363 CHADLQ6NUI6 762 aa7.43□□□□□ -1.22
LINC01002-227ENST00000633363 LAMC3Q9Y6N6 1575 aa7.42□□□□□ -1.22
LINC01002-227ENST00000633363 ABCC8Q09428 1581 aa7.41□□□□□ -1.22
LINC01002-227ENST00000633363 KIF21AQ7Z4S6 1674 aa7.41□□□□□ -1.22
LINC01002-227ENST00000633363 POTEB2H3BUK9 544 aa7.38□□□□□ -1.23
LINC01002-227ENST00000633363 FANCD2Q9BXW9 1451 aa7.37□□□□□ -1.23
LINC01002-227ENST00000633363 SPDYE2BA6NHP3 402 aa7.36□□□□□ -1.23
LINC01002-227ENST00000633363 SPDYE6P0CI01 402 aa7.36□□□□□ -1.23
LINC01002-227ENST00000633363 SPDYE2Q495Y8 402 aa7.36□□□□□ -1.23
LINC01002-227ENST00000633363 FAM163AQ96GL9 167 aaPredicted RBP7.35□□□□□ -1.23
LINC01002-227ENST00000633363 PDS5BQ9NTI5 1447 aa7.35□□□□□ -1.23
LINC01002-227ENST00000633363 SYNJ1O43426 1573 aa7.34□□□□□ -1.23
LINC01002-227ENST00000633363 CEP164Q9UPV0 1460 aa7.34□□□□□ -1.23
LINC01002-227ENST00000633363 CUX1P39880 1505 aa7.33□□□□□ -1.24
LINC01002-227ENST00000633363 WRNQ14191 1432 aaPredicted RBP eCLIP7.33□□□□□ -1.24
LINC01002-227ENST00000633363 URB2Q14146 1524 aaKnown RBP7.32□□□□□ -1.24
LINC01002-227ENST00000633363 ERCC6Q03468 1493 aa7.31□□□□□ -1.24
LINC01002-227ENST00000633363 BIVM-ERCC5R4GMW8 1640 aa7.31□□□□□ -1.24
LINC01002-227ENST00000633363 TOP2BQ02880 1626 aa7.3□□□□□ -1.24
LINC01002-227ENST00000633363 TRIM41Q8WV44 630 aa7.3□□□□□ -1.24
LINC01002-227ENST00000633363 DNMBPQ6XZF7 1577 aa7.29□□□□□ -1.24
LINC01002-227ENST00000633363 THOC2Q8NI27 1593 aaKnown RBP7.29□□□□□ -1.24
LINC01002-227ENST00000633363 TOPBP1Q92547 1522 aa7.29□□□□□ -1.24
LINC01002-227ENST00000633363 ATF5Q9Y2D1 282 aaPredicted RBP7.29□□□□□ -1.24
LINC01002-227ENST00000633363 MRC2Q9UBG0 1479 aa7.29□□□□□ -1.24
LINC01002-227ENST00000633363 PRR29P0C7W0 189 aa7.28□□□□□ -1.24
LINC01002-227ENST00000633363 FGD5Q6ZNL6 1462 aa7.26□□□□□ -1.25
LINC01002-227ENST00000633363 LCE2DQ5TA82 110 aaPredicted RBP7.26□□□□□ -1.25
LINC01002-227ENST00000633363 CDAN1Q8IWY9 1227 aa7.26□□□□□ -1.25
LINC01002-227ENST00000633363 WDR62O43379 1518 aa7.26□□□□□ -1.25
LINC01002-227ENST00000633363 POLA1P09884 1462 aaPredicted RBP7.24□□□□□ -1.25
LINC01002-227ENST00000633363 RAD54L2Q9Y4B4 1467 aa7.24□□□□□ -1.25
LINC01002-227ENST00000633363 MAMSTRQ6ZN01 415 aa7.23□□□□□ -1.25
LINC01002-227ENST00000633363 FARP1Q9Y4F1 1045 aaPredicted RBP7.23□□□□□ -1.25
LINC01002-227ENST00000633363 RUSC2Q8N2Y8 1516 aa7.22□□□□□ -1.25
LINC01002-227ENST00000633363 ZNF579Q8NAF0 562 aaKnown RBP7.22□□□□□ -1.25
LINC01002-227ENST00000633363 WDR97A6NE52 1622 aa7.22□□□□□ -1.25
LINC01002-227ENST00000633363 SOGA1O94964 1423 aa7.21□□□□□ -1.25
LINC01002-227ENST00000633363 TARBP1Q13395 1621 aaKnown RBP7.21□□□□□ -1.26
LINC01002-227ENST00000633363 GALR2O43603 387 aaPredicted RBP7.21□□□□□ -1.26
LINC01002-227ENST00000633363 FAM9AQ8IZU1 332 aaPredicted RBP7.21□□□□□ -1.26
LINC01002-227ENST00000633363 CUX2O14529 1486 aa7.21□□□□□ -1.26
LINC01002-227ENST00000633363 ZRANB1Q9UGI0 708 aa7.2□□□□□ -1.26
LINC01002-227ENST00000633363 FBLN2P98095 1184 aa7.18□□□□□ -1.26
LINC01002-227ENST00000633363 ABCA10Q8WWZ4 1543 aa7.17□□□□□ -1.26
LINC01002-227ENST00000633363 ZNF692Q9BU19 519 aaPredicted RBP7.17□□□□□ -1.26
LINC01002-227ENST00000633363 IFT140Q96RY7 1462 aa7.17□□□□□ -1.26
LINC01002-227ENST00000633363 ZNF608Q9ULD9 1512 aaPredicted RBP7.17□□□□□ -1.26
LINC01002-227ENST00000633363 MMRN1Q13201 1228 aa7.16□□□□□ -1.26
LINC01002-227ENST00000633363 SCUBE2Q9NQ36 999 aa7.16□□□□□ -1.26
LINC01002-227ENST00000633363 TDRD9Q8NDG6 1382 aaKnown RBP7.16□□□□□ -1.26
LINC01002-227ENST00000633363 ABCA5Q8WWZ7 1642 aa7.16□□□□□ -1.26
LINC01002-227ENST00000633363 KIF27Q86VH2 1401 aa7.15□□□□□ -1.27
LINC01002-227ENST00000633363 PBRM1Q86U86 1689 aa7.15□□□□□ -1.27
LINC01002-227ENST00000633363 EIF4G3O43432 1585 aaKnown RBP7.14□□□□□ -1.27
LINC01002-227ENST00000633363 AQRO60306 1485 aaKnown RBP eCLIP7.14□□□□□ -1.27
LINC01002-227ENST00000633363 METRNQ9UJH8 293 aa7.14□□□□□ -1.27
LINC01002-227ENST00000633363 EHMT2Q96KQ7 1210 aa7.13□□□□□ -1.27
LINC01002-227ENST00000633363 GAPVD1Q14C86 1478 aa7.12□□□□□ -1.27
LINC01002-227ENST00000633363 EEA1Q15075 1411 aa7.12□□□□□ -1.27
LINC01002-227ENST00000633363 POTEJP0CG39 1038 aa7.12□□□□□ -1.27
LINC01002-227ENST00000633363 CSRNP3Q8WYN3 585 aa7.12□□□□□ -1.27
LINC01002-227ENST00000633363 LOC105371045A0A1W2PR82 267 aa7.11□□□□□ -1.27
LINC01002-227ENST00000633363 PELP1Q8IZL8 1130 aaKnown RBP7.11□□□□□ -1.27
LINC01002-227ENST00000633363 SSUH2Q9Y2M2 353 aa7.11□□□□□ -1.27
LINC01002-227ENST00000633363 IGF1RP08069 1367 aa7.1□□□□□ -1.27
LINC01002-227ENST00000633363 ERICH3Q5RHP9 1530 aa7.09□□□□□ -1.27
LINC01002-227ENST00000633363 GRIN2BQ13224 1484 aa7.09□□□□□ -1.27
LINC01002-227ENST00000633363 KIF21BO75037 1637 aa7.09□□□□□ -1.28
LINC01002-227ENST00000633363 C7P10643 843 aa7.08□□□□□ -1.28
LINC01002-227ENST00000633363 KCNA4P22459 653 aa7.08□□□□□ -1.28
LINC01002-227ENST00000633363 SLC39A7Q92504 469 aa7.08□□□□□ -1.28
LINC01002-227ENST00000633363 SNAPC4Q5SXM2 1469 aa7.08□□□□□ -1.28
LINC01002-227ENST00000633363 PRXQ9BXM0 1461 aa7.08□□□□□ -1.28
LINC01002-227ENST00000633363 RAPGEF2Q9Y4G8 1499 aa7.08□□□□□ -1.28
LINC01002-227ENST00000633363 CUL7Q14999 1698 aa7.08□□□□□ -1.28
LINC01002-227ENST00000633363 ADAMTS12P58397 1594 aa7.08□□□□□ -1.28
LINC01002-227ENST00000633363 SPNS2Q8IVW8 549 aa7.07□□□□□ -1.28
LINC01002-227ENST00000633363 CARMIL1Q5VZK9 1371 aa7.07□□□□□ -1.28
LINC01002-227ENST00000633363 DNAJC5Q9H3Z4 198 aa7.06□□□□□ -1.28
LINC01002-227ENST00000633363 GOLGA3Q08378 1498 aa7.05□□□□□ -1.28
LINC01002-227ENST00000633363 CHD1O14646 1710 aa7.04□□□□□ -1.28
LINC01002-227ENST00000633363 MAGI1Q96QZ7 1491 aaPredicted RBP7.04□□□□□ -1.28
LINC01002-227ENST00000633363 FHAD1B1AJZ9 1412 aa7.03□□□□□ -1.28
LINC01002-227ENST00000633363 UBTFP17480 764 aaKnown RBP7.02□□□□□ -1.29
LINC01002-227ENST00000633363 CTTNBP2Q8WZ74 1663 aa7.02□□□□□ -1.29
LINC01002-227ENST00000633363 SYNJ2O15056 1496 aa7.01□□□□□ -1.29
LINC01002-227ENST00000633363 PAK3O75914 559 aaPredicted RBP7.01□□□□□ -1.29
LINC01002-227ENST00000633363 GRIN2AQ12879 1464 aa7□□□□□ -1.29
LINC01002-227ENST00000633363 PHF12Q96QT6 1004 aa7□□□□□ -1.29
LINC01002-227ENST00000633363 CEP170Q5SW79 1584 aa6.99□□□□□ -1.29
LINC01002-227ENST00000633363 TNIKQ9UKE5 1360 aa6.99□□□□□ -1.29
LINC01002-227ENST00000633363 CHMP7Q8WUX9 453 aaPredicted RBP6.99□□□□□ -1.29
LINC01002-227ENST00000633363 RANGAP1P46060 587 aaPredicted RBP6.98□□□□□ -1.29
LINC01002-227ENST00000633363 ASTLQ6HA08 431 aaPredicted RBP6.97□□□□□ -1.29
LINC01002-227ENST00000633363 CEP162Q5TB80 1403 aa6.96□□□□□ -1.3
LINC01002-227ENST00000633363 NUP160Q12769 1436 aa6.95□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms