RNA–Protein interactions for RNA: ENST00000633363.1

LINC01002-227, Transcript of long intergenic non-protein coding RNA 1002, humanhuman

TSL 1 (best) BASIC

Gene LINC01002, Length 541 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01002-227ENST00000633363 AEBP2Q6ZN18 517 aaPredicted RBP14.58□□□□□ -0.08
LINC01002-227ENST00000633363 CHIC1Q5VXU3 224 aa13.72□□□□□ -0.21
LINC01002-227ENST00000633363 SENP3Q9H4L4 574 aaPredicted RBP12.66□□□□□ -0.38
LINC01002-227ENST00000633363 POTEDQ86YR6 584 aa12.61□□□□□ -0.39
LINC01002-227ENST00000633363 PHF23Q9BUL5 403 aaPredicted RBP12.35□□□□□ -0.43
LINC01002-227ENST00000633363 FOXD1Q16676 465 aa11.86□□□□□ -0.51
LINC01002-227ENST00000633363 MSH5O43196 834 aa11.48□□□□□ -0.57
LINC01002-227ENST00000633363 PIAS4Q8N2W9 510 aaPredicted RBP10.94□□□□□ -0.66
LINC01002-227ENST00000633363 CACNB1Q02641 598 aaPredicted RBP10.42□□□□□ -0.74
LINC01002-227ENST00000633363 PPP6R1Q9UPN7 881 aa10.41□□□□□ -0.74
LINC01002-227ENST00000633363 ADRA2BP18089 450 aa10.37□□□□□ -0.75
LINC01002-227ENST00000633363 NISCHQ9Y2I1 1504 aa10.12□□□□□ -0.79
LINC01002-227ENST00000633363 PLPPR3Q6T4P5 718 aa10.09□□□□□ -0.79
LINC01002-227ENST00000633363 DMRT2Q9Y5R5 561 aa9.87□□□□□ -0.83
LINC01002-227ENST00000633363 MAPK8IP2Q13387 824 aaPredicted RBP9.77□□□□□ -0.85
LINC01002-227ENST00000633363 POTEHQ6S545 545 aa9.75□□□□□ -0.85
LINC01002-227ENST00000633363 RNF39Q9H2S5 420 aa9.67□□□□□ -0.86
LINC01002-227ENST00000633363 DCAF8L1A6NGE4 600 aa9.66□□□□□ -0.86
LINC01002-227ENST00000633363 SCAF1Q9H7N4 1312 aaKnown RBP9.56□□□□□ -0.88
LINC01002-227ENST00000633363 C1QBPQ07021 282 aaKnown RBP9.51□□□□□ -0.89
LINC01002-227ENST00000633363 HOXD11P31277 338 aaPredicted RBP9.14□□□□□ -0.95
LINC01002-227ENST00000633363 DNAJC5BQ9UF47 199 aa8.97□□□□□ -0.97
LINC01002-227ENST00000633363 CCDC180Q9P1Z9 1646 aa8.9□□□□□ -0.99
LINC01002-227ENST00000633363 RNF216Q9NWF9 866 aaPredicted RBP8.88□□□□□ -0.99
LINC01002-227ENST00000633363 GRWD1Q9BQ67 446 aaKnown RBP eCLIP8.83□□□□□ -1
LINC01002-227ENST00000633363 DSG3P32926 999 aa8.77□□□□□ -1.01
LINC01002-227ENST00000633363 CNKSR2Q8WXI2 1034 aa8.76□□□□□ -1.01
LINC01002-227ENST00000633363 SP7Q8TDD2 431 aaPredicted RBP8.73□□□□□ -1.01
LINC01002-227ENST00000633363 CAPN15O75808 1086 aa8.72□□□□□ -1.01
LINC01002-227ENST00000633363 PPP4R3CPQ6ZMV5 832 aa8.72□□□□□ -1.01
LINC01002-227ENST00000633363 SPINK5Q9NQ38 1064 aaPredicted RBP8.61□□□□□ -1.03
LINC01002-227ENST00000633363 CHRDL2Q6WN34 429 aa8.59□□□□□ -1.03
LINC01002-227ENST00000633363 ABCC9O60706 1549 aa8.54□□□□□ -1.04
LINC01002-227ENST00000633363 PLSCR2Q9NRY7 297 aa8.49□□□□□ -1.05
LINC01002-227ENST00000633363 ZCCHC6Q5VYS8 1495 aaKnown RBP8.48□□□□□ -1.05
LINC01002-227ENST00000633363 RBM42Q9BTD8 480 aaKnown RBP8.46□□□□□ -1.06
LINC01002-227ENST00000633363 U3KPZ7 1027 aaPredicted RBP8.45□□□□□ -1.06
LINC01002-227ENST00000633363 ABCB7O75027 752 aa8.41□□□□□ -1.06
LINC01002-227ENST00000633363 DCAF8L2P0C7V8 631 aa8.39□□□□□ -1.07
LINC01002-227ENST00000633363 TRHP20396 242 aaPredicted RBP8.37□□□□□ -1.07
LINC01002-227ENST00000633363 DCAF1Q9Y4B6 1507 aa8.34□□□□□ -1.07
LINC01002-227ENST00000633363 HAX1O00165 279 aa8.34□□□□□ -1.07
LINC01002-227ENST00000633363 ZNF219Q9P2Y4 722 aaPredicted RBP8.29□□□□□ -1.08
LINC01002-227ENST00000633363 NACADO15069 1562 aa8.29□□□□□ -1.08
LINC01002-227ENST00000633363 MYO15BQ96JP2 1530 aa8.28□□□□□ -1.08
LINC01002-227ENST00000633363 RB1CC1Q8TDY2 1594 aa8.26□□□□□ -1.09
LINC01002-227ENST00000633363 APLP2Q06481 763 aa8.24□□□□□ -1.09
LINC01002-227ENST00000633363 LHX8Q68G74 356 aa8.2□□□□□ -1.1
LINC01002-227ENST00000633363 NCBP3Q53F19 620 aaKnown RBP8.19□□□□□ -1.1
LINC01002-227ENST00000633363 SHROOM4Q9ULL8 1493 aa8.19□□□□□ -1.1
LINC01002-227ENST00000633363 SCRIBQ14160 1630 aa8.18□□□□□ -1.1
LINC01002-227ENST00000633363 PIP4P2Q8N4L2 257 aa8.18□□□□□ -1.1
LINC01002-227ENST00000633363 UNC13AQ9UPW8 1703 aa8.17□□□□□ -1.1
LINC01002-227ENST00000633363 EVX2Q03828 476 aa8.06□□□□□ -1.12
LINC01002-227ENST00000633363 BICRAQ9NZM4 1560 aa8.05□□□□□ -1.12
LINC01002-227ENST00000633363 AKT1S1Q96B36 256 aa8.05□□□□□ -1.12
LINC01002-227ENST00000633363 PABPN1Q86U42 306 aaKnown RBP eCLIP8.02□□□□□ -1.13
LINC01002-227ENST00000633363 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP8□□□□□ -1.13
LINC01002-227ENST00000633363 HNRNPUL2Q1KMD3 747 aaKnown RBP8□□□□□ -1.13
LINC01002-227ENST00000633363 NPM3O75607 178 aaKnown RBP7.99□□□□□ -1.13
LINC01002-227ENST00000633363 REM2Q8IYK8 340 aaPredicted RBP7.98□□□□□ -1.13
LINC01002-227ENST00000633363 FXR2P51116 673 aaKnown RBP eCLIP7.96□□□□□ -1.14
LINC01002-227ENST00000633363 POLA2Q14181 598 aa7.91□□□□□ -1.14
LINC01002-227ENST00000633363 PITPNM1O00562 1244 aa7.9□□□□□ -1.14
LINC01002-227ENST00000633363 SAMD1Q6SPF0 538 aaPredicted RBP7.9□□□□□ -1.14
LINC01002-227ENST00000633363 CECR2Q9BXF3 1484 aa7.89□□□□□ -1.15
LINC01002-227ENST00000633363 GABBR2O75899 941 aa7.87□□□□□ -1.15
LINC01002-227ENST00000633363 MROH2BQ7Z745 1585 aa7.83□□□□□ -1.16
LINC01002-227ENST00000633363 SMARCA4P51532 1647 aa7.82□□□□□ -1.16
LINC01002-227ENST00000633363 SLC4A2P04920 1241 aa7.82□□□□□ -1.16
LINC01002-227ENST00000633363 BAZ1AQ9NRL2 1556 aaPredicted RBP7.81□□□□□ -1.16
LINC01002-227ENST00000633363 EIF4G1Q04637 1599 aaKnown RBP7.8□□□□□ -1.16
LINC01002-227ENST00000633363 RSF1Q96T23 1441 aaPredicted RBP7.79□□□□□ -1.16
LINC01002-227ENST00000633363 SUPT5HO00267 1087 aaKnown RBP7.79□□□□□ -1.16
LINC01002-227ENST00000633363 POTEMA6NI47 508 aa7.78□□□□□ -1.16
LINC01002-227ENST00000633363 WIZO95785 1651 aa7.78□□□□□ -1.16
LINC01002-227ENST00000633363 C19orf67A6NJJ6 358 aa7.75□□□□□ -1.17
LINC01002-227ENST00000633363 CC2D2AQ9P2K1 1620 aa7.73□□□□□ -1.17
LINC01002-227ENST00000633363 PRKAR2AP13861 404 aaKnown RBP7.72□□□□□ -1.17
LINC01002-227ENST00000633363 POTEGQ6S5H5 508 aa7.72□□□□□ -1.17
LINC01002-227ENST00000633363 ZBTB12Q9Y330 459 aaPredicted RBP7.71□□□□□ -1.18
LINC01002-227ENST00000633363 PEG3Q9GZU2 1588 aa7.71□□□□□ -1.18
LINC01002-227ENST00000633363 ATAD2BQ9ULI0 1458 aa7.7□□□□□ -1.18
LINC01002-227ENST00000633363 SMARCA2P51531 1590 aa7.69□□□□□ -1.18
LINC01002-227ENST00000633363 OSCARQ8IYS5 282 aa7.69□□□□□ -1.18
LINC01002-227ENST00000633363 PCDH10Q9P2E7 1040 aa7.68□□□□□ -1.18
LINC01002-227ENST00000633363 TOP2AP11388 1531 aaKnown RBP7.67□□□□□ -1.18
LINC01002-227ENST00000633363 POTEIP0CG38 1075 aa7.65□□□□□ -1.18
LINC01002-227ENST00000633363 BAZ1BQ9UIG0 1483 aaKnown RBP7.65□□□□□ -1.18
LINC01002-227ENST00000633363 NCAPD3P42695 1498 aa7.64□□□□□ -1.19
LINC01002-227ENST00000633363 HMGXB3Q12766 1538 aa7.63□□□□□ -1.19
LINC01002-227ENST00000633363 CCDC88BA6NC98 1476 aa7.58□□□□□ -1.2
LINC01002-227ENST00000633363 DCBLD2Q96PD2 775 aa7.56□□□□□ -1.2
LINC01002-227ENST00000633363 OTUD5Q96G74 571 aa7.55□□□□□ -1.2
LINC01002-227ENST00000633363 CLEC11AQ9Y240 323 aa7.55□□□□□ -1.2
LINC01002-227ENST00000633363 CLCN6P51797 869 aa7.47□□□□□ -1.21
LINC01002-227ENST00000633363 SPDYE1Q8NFV5 336 aaPredicted RBP7.47□□□□□ -1.21
LINC01002-227ENST00000633363 NESP48681 1621 aa7.47□□□□□ -1.21
LINC01002-227ENST00000633363 PRDM2Q13029 1718 aa7.46□□□□□ -1.22
LINC01002-227ENST00000633363 CFTRP13569 1480 aa7.44□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 8.5 ms