RNA–Protein interactions for RNA: ENST00000631006.2

SRGAP1-207, Transcript of SLIT-ROBO Rho GTPase activating protein 1, humanhuman

TSL 5 BASIC

Gene SRGAP1, Length 8,406 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP1-207ENST00000631006 GOLGA2Q08379 1002 aa8.51□□□□□ -1.05
SRGAP1-207ENST00000631006 EIF5BO60841 1220 aaKnown RBP8.51□□□□□ -1.05
SRGAP1-207ENST00000631006 TAOK2Q9UL54 1235 aa8.49□□□□□ -1.05
SRGAP1-207ENST00000631006 PPM1GO15355 546 aaPredicted RBP8.48□□□□□ -1.05
SRGAP1-207ENST00000631006 HNRNPUQ00839 825 aaKnown RBP eCLIP8.47□□□□□ -1.05
SRGAP1-207ENST00000631006 CASC1Q6TDU7 716 aa8.47□□□□□ -1.05
SRGAP1-207ENST00000631006 GTF3C3Q9Y5Q9 886 aa8.47□□□□□ -1.05
SRGAP1-207ENST00000631006 ISY1Q9ULR0 285 aaKnown RBP8.46□□□□□ -1.06
SRGAP1-207ENST00000631006 CSRNP3Q8WYN3 585 aa8.45□□□□□ -1.06
SRGAP1-207ENST00000631006 CFAP53Q96M91 514 aa8.45□□□□□ -1.06
SRGAP1-207ENST00000631006 EIF4G2P78344 907 aaKnown RBP eCLIP8.44□□□□□ -1.06
SRGAP1-207ENST00000631006 CCDC136Q96JN2 1154 aa8.44□□□□□ -1.06
SRGAP1-207ENST00000631006 TPRNQ4KMQ1 711 aa8.44□□□□□ -1.06
SRGAP1-207ENST00000631006 TMX4Q9H1E5 349 aaPredicted RBP8.44□□□□□ -1.06
SRGAP1-207ENST00000631006 GLIPR1L2Q4G1C9 344 aa8.43□□□□□ -1.06
SRGAP1-207ENST00000631006 OS9Q13438 667 aaPredicted RBP8.43□□□□□ -1.06
SRGAP1-207ENST00000631006 LAS1LQ9Y4W2 734 aaKnown RBP8.42□□□□□ -1.06
SRGAP1-207ENST00000631006 POGKQ9P215 609 aa8.42□□□□□ -1.06
SRGAP1-207ENST00000631006 FKBP8Q14318 412 aa8.42□□□□□ -1.06
SRGAP1-207ENST00000631006 GOLGA6L22H0YM25 854 aa8.41□□□□□ -1.06
SRGAP1-207ENST00000631006 MTUS2Q5JR59 1369 aa8.41□□□□□ -1.06
SRGAP1-207ENST00000631006 PRM3Q9NNZ6 103 aa8.41□□□□□ -1.06
SRGAP1-207ENST00000631006 NAP1L2Q9ULW6 460 aaPredicted RBP8.41□□□□□ -1.06
SRGAP1-207ENST00000631006 FGD1P98174 961 aa8.4□□□□□ -1.06
SRGAP1-207ENST00000631006 PLEKHD1A6NEE1 506 aa8.4□□□□□ -1.06
SRGAP1-207ENST00000631006 BECN1Q14457 450 aa8.39□□□□□ -1.07
SRGAP1-207ENST00000631006 TRIM44Q96DX7 344 aaPredicted RBP8.39□□□□□ -1.07
SRGAP1-207ENST00000631006 MAPK8IP3Q9UPT6 1336 aa8.39□□□□□ -1.07
SRGAP1-207ENST00000631006 DDX10Q13206 875 aaKnown RBP8.39□□□□□ -1.07
SRGAP1-207ENST00000631006 FTSJ3Q8IY81 847 aaKnown RBP8.39□□□□□ -1.07
SRGAP1-207ENST00000631006 MRS2Q9HD23 443 aa8.38□□□□□ -1.07
SRGAP1-207ENST00000631006 PTMAP06454 111 aaKnown RBP8.38□□□□□ -1.07
SRGAP1-207ENST00000631006 CCDC9Q9Y3X0 531 aaKnown RBP8.38□□□□□ -1.07
SRGAP1-207ENST00000631006 GOLGA6L6A8MZA4 724 aa8.37□□□□□ -1.07
SRGAP1-207ENST00000631006 RGL3Q3MIN7 710 aa8.37□□□□□ -1.07
SRGAP1-207ENST00000631006 HDGFP51858 240 aaKnown RBP8.37□□□□□ -1.07
SRGAP1-207ENST00000631006 CDCA8Q53HL2 280 aa8.37□□□□□ -1.07
SRGAP1-207ENST00000631006 KRI1Q8N9T8 703 aaKnown RBP8.37□□□□□ -1.07
SRGAP1-207ENST00000631006 MLECQ14165 292 aa8.37□□□□□ -1.07
SRGAP1-207ENST00000631006 ERCC6Q03468 1493 aa8.37□□□□□ -1.07
SRGAP1-207ENST00000631006 SCRIBQ14160 1630 aa8.37□□□□□ -1.07
SRGAP1-207ENST00000631006 KCNJ4P48050 445 aa8.36□□□□□ -1.07
SRGAP1-207ENST00000631006 NUDCQ9Y266 331 aa8.36□□□□□ -1.07
SRGAP1-207ENST00000631006 NBR1Q14596 966 aa8.35□□□□□ -1.07
SRGAP1-207ENST00000631006 KNSTRNQ9Y448 316 aa8.35□□□□□ -1.07
SRGAP1-207ENST00000631006 AEBP2Q6ZN18 517 aaPredicted RBP8.34□□□□□ -1.07
SRGAP1-207ENST00000631006 G3V3G9 751 aa8.34□□□□□ -1.07
SRGAP1-207ENST00000631006 DCAF8Q5TAQ9 597 aa8.34□□□□□ -1.07
SRGAP1-207ENST00000631006 RRP7BPQ9NSQ0 103 aa8.33□□□□□ -1.08
SRGAP1-207ENST00000631006 DNTTIP2Q5QJE6 756 aaKnown RBP8.33□□□□□ -1.08
SRGAP1-207ENST00000631006 SOX12O15370 315 aa8.32□□□□□ -1.08
SRGAP1-207ENST00000631006 DDRGK1Q96HY6 314 aa8.32□□□□□ -1.08
SRGAP1-207ENST00000631006 CSB-PGBD3P0DP91 1061 aa8.32□□□□□ -1.08
SRGAP1-207ENST00000631006 PNNQ9H307 717 aaKnown RBP8.32□□□□□ -1.08
SRGAP1-207ENST00000631006 ANP32EQ9BTT0 268 aa8.31□□□□□ -1.08
SRGAP1-207ENST00000631006 NEUROD2Q15784 382 aa8.31□□□□□ -1.08
SRGAP1-207ENST00000631006 ZNF330Q9Y3S2 320 aaPredicted RBP8.31□□□□□ -1.08
SRGAP1-207ENST00000631006 CHMP4BQ9H444 224 aaKnown RBP8.3□□□□□ -1.08
SRGAP1-207ENST00000631006 PLCB2Q00722 1185 aa8.3□□□□□ -1.08
SRGAP1-207ENST00000631006 GNL2Q13823 731 aaKnown RBP8.3□□□□□ -1.08
SRGAP1-207ENST00000631006 TNNT2P45379 298 aaPredicted RBP8.3□□□□□ -1.08
SRGAP1-207ENST00000631006 U2SURPO15042 1029 aaKnown RBP8.29□□□□□ -1.08
SRGAP1-207ENST00000631006 NRDCO43847 1150 aa8.29□□□□□ -1.08
SRGAP1-207ENST00000631006 RSF1Q96T23 1441 aaPredicted RBP8.29□□□□□ -1.08
SRGAP1-207ENST00000631006 PAK3O75914 559 aaPredicted RBP8.29□□□□□ -1.08
SRGAP1-207ENST00000631006 KANK1Q14678 1352 aa8.29□□□□□ -1.08
SRGAP1-207ENST00000631006 KIAA2012Q0VF49 1180 aa8.28□□□□□ -1.08
SRGAP1-207ENST00000631006 CFDP1Q9UEE9 299 aaPredicted RBP8.28□□□□□ -1.08
SRGAP1-207ENST00000631006 ZBTB4Q9P1Z0 1013 aaPredicted RBP8.27□□□□□ -1.08
SRGAP1-207ENST00000631006 L1TD1Q5T7N2 865 aaKnown RBP8.27□□□□□ -1.09
SRGAP1-207ENST00000631006 RTF1Q92541 710 aaKnown RBP8.27□□□□□ -1.09
SRGAP1-207ENST00000631006 GOLGA6L4A6NEF3 574 aa8.27□□□□□ -1.09
SRGAP1-207ENST00000631006 DCAF8L1A6NGE4 600 aa8.27□□□□□ -1.09
SRGAP1-207ENST00000631006 IRX6P78412 446 aaPredicted RBP8.26□□□□□ -1.09
SRGAP1-207ENST00000631006 ACIN1Q9UKV3 1341 aaKnown RBP8.26□□□□□ -1.09
SRGAP1-207ENST00000631006 SRPK2P78362 688 aaKnown RBP8.25□□□□□ -1.09
SRGAP1-207ENST00000631006 CHAF1AQ13111 956 aaPredicted RBP8.25□□□□□ -1.09
SRGAP1-207ENST00000631006 CARD11Q9BXL7 1154 aa8.25□□□□□ -1.09
SRGAP1-207ENST00000631006 FRAT1Q92837 279 aaPredicted RBP8.25□□□□□ -1.09
SRGAP1-207ENST00000631006 HSP90AB1P08238 724 aaKnown RBP8.24□□□□□ -1.09
SRGAP1-207ENST00000631006 MS4A1P11836 297 aa8.24□□□□□ -1.09
SRGAP1-207ENST00000631006 MCCP23508 829 aa8.24□□□□□ -1.09
SRGAP1-207ENST00000631006 NOC3LQ8WTT2 800 aaKnown RBP8.24□□□□□ -1.09
SRGAP1-207ENST00000631006 HIRIP3Q9BW71 556 aaPredicted RBP8.24□□□□□ -1.09
SRGAP1-207ENST00000631006 MEX3CQ5U5Q3 659 aaKnown RBP8.23□□□□□ -1.09
SRGAP1-207ENST00000631006 MSH5O43196 834 aa8.22□□□□□ -1.09
SRGAP1-207ENST00000631006 TAF7LQ5H9L4 462 aa8.22□□□□□ -1.09
SRGAP1-207ENST00000631006 PHF23Q9BUL5 403 aaPredicted RBP8.22□□□□□ -1.09
SRGAP1-207ENST00000631006 SAFB2Q14151 953 aaKnown RBP eCLIP8.21□□□□□ -1.09
SRGAP1-207ENST00000631006 GORABQ5T7V8 394 aa8.21□□□□□ -1.1
SRGAP1-207ENST00000631006 SENP3-EIF4A1A0A087X0R7 540 aa8.21□□□□□ -1.1
SRGAP1-207ENST00000631006 VPS53Q5VIR6 699 aa8.21□□□□□ -1.1
SRGAP1-207ENST00000631006 PDE4CQ08493 712 aa8.21□□□□□ -1.1
SRGAP1-207ENST00000631006 CHMP3Q9Y3E7 222 aa8.2□□□□□ -1.1
SRGAP1-207ENST00000631006 DRC7Q8IY82 874 aa8.2□□□□□ -1.1
SRGAP1-207ENST00000631006 CC2D1BQ5T0F9 858 aaKnown RBP8.2□□□□□ -1.1
SRGAP1-207ENST00000631006 DCAF1Q9Y4B6 1507 aa8.19□□□□□ -1.1
SRGAP1-207ENST00000631006 GTF2E1P29083 439 aaPredicted RBP8.19□□□□□ -1.1
SRGAP1-207ENST00000631006 HDGFL2Q7Z4V5 671 aaPredicted RBP8.19□□□□□ -1.1
SRGAP1-207ENST00000631006 STK26Q9P289 416 aa8.19□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms