RNA–Protein interactions for RNA: ENST00000630962.1

SRP54-214, Transcript of signal recognition particle 54, humanhuman

TSL 5 BASIC

Gene SRP54, Length 162 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-214ENST00000630962 DCAF8Q5TAQ9 597 aa9.87□□□□□ -0.83
SRP54-214ENST00000630962 RASEFQ8IZ41 740 aa9.87□□□□□ -0.83
SRP54-214ENST00000630962 TRIM41Q8WV44 630 aa9.86□□□□□ -0.83
SRP54-214ENST00000630962 CCDC61Q9Y6R9 512 aa9.83□□□□□ -0.84
SRP54-214ENST00000630962 EVX2Q03828 476 aa9.82□□□□□ -0.84
SRP54-214ENST00000630962 SGIP1Q9BQI5 828 aa9.81□□□□□ -0.84
SRP54-214ENST00000630962 CIZ1Q9ULV3 898 aaPredicted RBP9.79□□□□□ -0.84
SRP54-214ENST00000630962 CHRM1P11229 460 aaPredicted RBP9.77□□□□□ -0.85
SRP54-214ENST00000630962 GABBR2O75899 941 aa9.76□□□□□ -0.85
SRP54-214ENST00000630962 KIF12Q96FN5 646 aa9.75□□□□□ -0.85
SRP54-214ENST00000630962 PHF12Q96QT6 1004 aa9.74□□□□□ -0.85
SRP54-214ENST00000630962 ZNF467Q7Z7K2 595 aaPredicted RBP9.7□□□□□ -0.86
SRP54-214ENST00000630962 PCDHB13Q9Y5F0 798 aa9.7□□□□□ -0.86
SRP54-214ENST00000630962 PYGBP11216 843 aa9.69□□□□□ -0.86
SRP54-214ENST00000630962 MAP3K13O43283 966 aa9.68□□□□□ -0.86
SRP54-214ENST00000630962 TAOK2Q9UL54 1235 aa9.68□□□□□ -0.86
SRP54-214ENST00000630962 DCBLD2Q96PD2 775 aa9.67□□□□□ -0.86
SRP54-214ENST00000630962 MS4A3Q96HJ5 214 aa9.65□□□□□ -0.86
SRP54-214ENST00000630962 GALR2O43603 387 aaPredicted RBP9.64□□□□□ -0.87
SRP54-214ENST00000630962 TIE1P35590 1138 aa9.63□□□□□ -0.87
SRP54-214ENST00000630962 ECM2O94769 699 aaPredicted RBP9.62□□□□□ -0.87
SRP54-214ENST00000630962 AMER1Q5JTC6 1135 aaPredicted RBP9.61□□□□□ -0.87
SRP54-214ENST00000630962 IFNL1Q8IU54 200 aa9.6□□□□□ -0.87
SRP54-214ENST00000630962 PKD2Q13563 968 aa9.58□□□□□ -0.88
SRP54-214ENST00000630962 RIOK3O14730 519 aaKnown RBP9.57□□□□□ -0.88
SRP54-214ENST00000630962 PDAP1Q13442 181 aaKnown RBP9.57□□□□□ -0.88
SRP54-214ENST00000630962 ASTLQ6HA08 431 aaPredicted RBP9.56□□□□□ -0.88
SRP54-214ENST00000630962 VGFO15240 615 aaPredicted RBP9.54□□□□□ -0.88
SRP54-214ENST00000630962 PCDHB8Q9UN66 801 aa9.54□□□□□ -0.88
SRP54-214ENST00000630962 ATMINO43313 823 aaPredicted RBP9.52□□□□□ -0.89
SRP54-214ENST00000630962 PSEN1P49768 467 aa9.52□□□□□ -0.89
SRP54-214ENST00000630962 TMEM106CQ9BVX2 250 aa9.52□□□□□ -0.89
SRP54-214ENST00000630962 BMP2KQ9NSY1 1161 aaPredicted RBP9.51□□□□□ -0.89
SRP54-214ENST00000630962 TTLL13PA6NNM8 815 aa9.5□□□□□ -0.89
SRP54-214ENST00000630962 GOLGA2Q08379 1002 aa9.5□□□□□ -0.89
SRP54-214ENST00000630962 SLC39A7Q92504 469 aa9.5□□□□□ -0.89
SRP54-214ENST00000630962 C7P10643 843 aa9.49□□□□□ -0.89
SRP54-214ENST00000630962 IER5LQ5T953 404 aa9.49□□□□□ -0.89
SRP54-214ENST00000630962 POTEIP0CG38 1075 aa9.46□□□□□ -0.9
SRP54-214ENST00000630962 ATN1P54259 1190 aaPredicted RBP9.46□□□□□ -0.9
SRP54-214ENST00000630962 TRPC6Q9Y210 931 aa9.46□□□□□ -0.9
SRP54-214ENST00000630962 RNF25Q96BH1 459 aaPredicted RBP9.45□□□□□ -0.9
SRP54-214ENST00000630962 TRIM35Q9UPQ4 493 aa9.45□□□□□ -0.9
SRP54-214ENST00000630962 RGL2O15211 777 aa9.44□□□□□ -0.9
SRP54-214ENST00000630962 MKRN3Q13064 507 aaKnown RBP9.44□□□□□ -0.9
SRP54-214ENST00000630962 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP9.41□□□□□ -0.9
SRP54-214ENST00000630962 ZFP91Q96JP5 570 aaPredicted RBP9.41□□□□□ -0.9
SRP54-214ENST00000630962 STK25O00506 426 aa9.39□□□□□ -0.91
SRP54-214ENST00000630962 SEC24BO95487 1268 aa9.39□□□□□ -0.91
SRP54-214ENST00000630962 METRNQ9UJH8 293 aa9.39□□□□□ -0.91
SRP54-214ENST00000630962 SOX12O15370 315 aa9.37□□□□□ -0.91
SRP54-214ENST00000630962 PELP1Q8IZL8 1130 aaKnown RBP9.37□□□□□ -0.91
SRP54-214ENST00000630962 CABP2Q9NPB3 220 aa9.37□□□□□ -0.91
SRP54-214ENST00000630962 RTN4Q9NQC3 1192 aaKnown RBP9.37□□□□□ -0.91
SRP54-214ENST00000630962 PLCG2P16885 1265 aa9.36□□□□□ -0.91
SRP54-214ENST00000630962 BCL11BQ9C0K0 894 aaPredicted RBP9.36□□□□□ -0.91
SRP54-214ENST00000630962 STK24Q9Y6E0 443 aa9.36□□□□□ -0.91
SRP54-214ENST00000630962 HS6ST3Q8IZP7 471 aa9.35□□□□□ -0.91
SRP54-214ENST00000630962 OCEL1Q9H607 264 aa9.35□□□□□ -0.91
SRP54-214ENST00000630962 DCAF8L2P0C7V8 631 aa9.34□□□□□ -0.91
SRP54-214ENST00000630962 IRX5P78411 483 aaPredicted RBP9.32□□□□□ -0.92
SRP54-214ENST00000630962 RYDENQ9NUL5 291 aaKnown RBP9.32□□□□□ -0.92
SRP54-214ENST00000630962 CHGAP10645 457 aaKnown RBP9.31□□□□□ -0.92
SRP54-214ENST00000630962 MAMSTRQ6ZN01 415 aa9.31□□□□□ -0.92
SRP54-214ENST00000630962 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP9.31□□□□□ -0.926e-9■■□□□ 13.6
SRP54-214ENST00000630962 EFCAB3Q8N7B9 438 aa9.3□□□□□ -0.92
SRP54-214ENST00000630962 DNAJC5Q9H3Z4 198 aa9.3□□□□□ -0.92
SRP54-214ENST00000630962 NLRP6P59044 892 aa9.29□□□□□ -0.92
SRP54-214ENST00000630962 LHX8Q68G74 356 aa9.29□□□□□ -0.92
SRP54-214ENST00000630962 L3MBTL3Q96JM7 780 aaPredicted RBP9.29□□□□□ -0.92
SRP54-214ENST00000630962 ILDR1Q86SU0 546 aaPredicted RBP9.27□□□□□ -0.93
SRP54-214ENST00000630962 G3V3G9 751 aa9.26□□□□□ -0.93
SRP54-214ENST00000630962 SCUBE2Q9NQ36 999 aa9.24□□□□□ -0.93
SRP54-214ENST00000630962 COLQQ9Y215 455 aaPredicted RBP9.24□□□□□ -0.93
SRP54-214ENST00000630962 PDCD7Q8N8D1 485 aaKnown RBP9.22□□□□□ -0.93
SRP54-214ENST00000630962 POTEFA5A3E0 1075 aa9.21□□□□□ -0.94
SRP54-214ENST00000630962 BBXQ8WY36 941 aaPredicted RBP9.19□□□□□ -0.94
SRP54-214ENST00000630962 PHF8Q9UPP1 1060 aa9.19□□□□□ -0.94
SRP54-214ENST00000630962 MFRPQ9BY79 579 aa9.18□□□□□ -0.94
SRP54-214ENST00000630962 ZBTB4Q9P1Z0 1013 aaPredicted RBP9.18□□□□□ -0.94
SRP54-214ENST00000630962 FBXO22Q8NEZ5 403 aa9.17□□□□□ -0.94
SRP54-214ENST00000630962 BOLA1Q9Y3E2 137 aa9.17□□□□□ -0.94
SRP54-214ENST00000630962 C3orf67Q6ZVT6 689 aa9.16□□□□□ -0.94
SRP54-214ENST00000630962 EIF2AK3Q9NZJ5 1116 aaKnown RBP9.16□□□□□ -0.94
SRP54-214ENST00000630962 POTEB2H3BUK9 544 aa9.14□□□□□ -0.95
SRP54-214ENST00000630962 MS4A4AQ96JQ5 239 aa9.12□□□□□ -0.95
SRP54-214ENST00000630962 TMEM121BQ9BXQ6 578 aaPredicted RBP9.11□□□□□ -0.95
SRP54-214ENST00000630962 DPY19L2Q6NUT2 758 aa9.1□□□□□ -0.95
SRP54-214ENST00000630962 NKX1-1Q15270 411 aaPredicted RBP9.09□□□□□ -0.95
SRP54-214ENST00000630962 OTUD5Q96G74 571 aa9.09□□□□□ -0.95
SRP54-214ENST00000630962 POTEJP0CG39 1038 aa9.08□□□□□ -0.96
SRP54-214ENST00000630962 MICALL2Q8IY33 904 aa9.08□□□□□ -0.96
SRP54-214ENST00000630962 SPRYD3Q8NCJ5 442 aa9.07□□□□□ -0.96
SRP54-214ENST00000630962 SNPHO15079 494 aa9.05□□□□□ -0.96
SRP54-214ENST00000630962 GTPBP6O43824 516 aaPredicted RBP9.05□□□□□ -0.96
SRP54-214ENST00000630962 SLAIN1Q8ND83 568 aa9.05□□□□□ -0.96
SRP54-214ENST00000630962 TMC2Q8TDI7 906 aa8.99□□□□□ -0.97
SRP54-214ENST00000630962 PPP1R37O75864 691 aa8.98□□□□□ -0.97
SRP54-214ENST00000630962 PAXIP1Q6ZW49 1069 aaPredicted RBP8.97□□□□□ -0.97
SRP54-214ENST00000630962 CFAP44Q96MT7 982 aa8.95□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 7.9 ms