RNA–Protein interactions for RNA: ENST00000630607.2

UBE3A-221, Transcript of ubiquitin protein ligase E3A, humanhuman

TSL 3

Gene UBE3A, Length 1,873 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3A-221ENST00000630607 NECTIN2Q92692 538 aa13.28□□□□□ -0.28
UBE3A-221ENST00000630607 HS6ST3Q8IZP7 471 aa13.27□□□□□ -0.29
UBE3A-221ENST00000630607 PDIA4P13667 645 aaKnown RBP13.24□□□□□ -0.29
UBE3A-221ENST00000630607 MKRN4PQ13434 485 aaPredicted RBP13.23□□□□□ -0.29
UBE3A-221ENST00000630607 IGSF3O75054 1194 aa13.21□□□□□ -0.3
UBE3A-221ENST00000630607 NKX1-1Q15270 411 aaPredicted RBP13.18□□□□□ -0.3
UBE3A-221ENST00000630607 ZNF219Q9P2Y4 722 aaPredicted RBP13.18□□□□□ -0.3
UBE3A-221ENST00000630607 SHROOM4Q9ULL8 1493 aa13.18□□□□□ -0.3
UBE3A-221ENST00000630607 SAMD1Q6SPF0 538 aaPredicted RBP13.16□□□□□ -0.3
UBE3A-221ENST00000630607 GTPBP6O43824 516 aaPredicted RBP13.15□□□□□ -0.3
UBE3A-221ENST00000630607 P3H3Q8IVL6 736 aa13.14□□□□□ -0.31
UBE3A-221ENST00000630607 SLC24A3Q9HC58 644 aa13.14□□□□□ -0.31
UBE3A-221ENST00000630607 ZC3H15Q8WU90 426 aaKnown RBP13.11□□□□□ -0.31
UBE3A-221ENST00000630607 ARID3CA6NKF2 412 aa13.1□□□□□ -0.31
UBE3A-221ENST00000630607 DCAF8L1A6NGE4 600 aa13.09□□□□□ -0.31
UBE3A-221ENST00000630607 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.08□□□□□ -0.32
UBE3A-221ENST00000630607 HNRNPUL2Q1KMD3 747 aaKnown RBP13.08□□□□□ -0.32
UBE3A-221ENST00000630607 APBB1O00213 710 aa13.04□□□□□ -0.32
UBE3A-221ENST00000630607 KCTD17Q8N5Z5 321 aa13.03□□□□□ -0.32
UBE3A-221ENST00000630607 KCNV2Q8TDN2 545 aa13.03□□□□□ -0.32
UBE3A-221ENST00000630607 CIZ1Q9ULV3 898 aaPredicted RBP13.02□□□□□ -0.32
UBE3A-221ENST00000630607 CDK11BP21127 795 aaKnown RBP13.01□□□□□ -0.33
UBE3A-221ENST00000630607 CDK11AQ9UQ88 783 aaPredicted RBP13.01□□□□□ -0.33
UBE3A-221ENST00000630607 RAD21O60216 631 aa12.97□□□□□ -0.33
UBE3A-221ENST00000630607 HMGB1P09429 215 aaKnown RBP12.97□□□□□ -0.33
UBE3A-221ENST00000630607 RNF25Q96BH1 459 aaPredicted RBP12.96□□□□□ -0.33
UBE3A-221ENST00000630607 RGS22Q8NE09 1264 aa12.94□□□□□ -0.34
UBE3A-221ENST00000630607 HSP90B1P14625 803 aaKnown RBP12.93□□□□□ -0.34
UBE3A-221ENST00000630607 RNF39Q9H2S5 420 aa12.92□□□□□ -0.34
UBE3A-221ENST00000630607 PLCD3Q8N3E9 789 aa12.91□□□□□ -0.34
UBE3A-221ENST00000630607 PLEKHG5O94827 1062 aa12.88□□□□□ -0.35
UBE3A-221ENST00000630607 IL27Q8NEV9 243 aa12.88□□□□□ -0.35
UBE3A-221ENST00000630607 GPBP1L1Q9HC44 474 aaPredicted RBP12.87□□□□□ -0.35
UBE3A-221ENST00000630607 MKRN3Q13064 507 aaKnown RBP12.87□□□□□ -0.35
UBE3A-221ENST00000630607 MTMR7Q9Y216 660 aa12.87□□□□□ -0.35
UBE3A-221ENST00000630607 U3KPZ7 1027 aaPredicted RBP12.86□□□□□ -0.35
UBE3A-221ENST00000630607 CCDC82Q8N4S0 544 aa12.85□□□□□ -0.35
UBE3A-221ENST00000630607 ZNF428Q96B54 188 aa12.84□□□□□ -0.35
UBE3A-221ENST00000630607 ZMYND10O75800 440 aa12.83□□□□□ -0.36
UBE3A-221ENST00000630607 TRIM41Q8WV44 630 aa12.83□□□□□ -0.36
UBE3A-221ENST00000630607 PUS7Q96PZ0 661 aaKnown RBP12.82□□□□□ -0.36
UBE3A-221ENST00000630607 CHMP4AQ9BY43 222 aa12.82□□□□□ -0.36
UBE3A-221ENST00000630607 C1QBPQ07021 282 aaKnown RBP12.81□□□□□ -0.36
UBE3A-221ENST00000630607 TRAIPQ9BWF2 469 aa12.79□□□□□ -0.36
UBE3A-221ENST00000630607 RBM25P49756 843 aaKnown RBP12.78□□□□□ -0.36
UBE3A-221ENST00000630607 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.78□□□□□ -0.36
UBE3A-221ENST00000630607 FOXD4L5Q5VV16 416 aaPredicted RBP12.76□□□□□ -0.37
UBE3A-221ENST00000630607 FOXD4L4Q8WXT5 416 aaPredicted RBP12.76□□□□□ -0.37
UBE3A-221ENST00000630607 WDR70Q9NW82 654 aa12.76□□□□□ -0.37
UBE3A-221ENST00000630607 STAG3Q9UJ98 1225 aa12.76□□□□□ -0.37
UBE3A-221ENST00000630607 AEBP1Q8IUX7 1158 aa12.75□□□□□ -0.37
UBE3A-221ENST00000630607 CCDC180Q9P1Z9 1646 aa12.75□□□□□ -0.37
UBE3A-221ENST00000630607 TMCO4Q5TGY1 634 aa12.74□□□□□ -0.37
UBE3A-221ENST00000630607 MIER1Q8N108 512 aa12.74□□□□□ -0.37
UBE3A-221ENST00000630607 STK25O00506 426 aa12.72□□□□□ -0.37
UBE3A-221ENST00000630607 ZCCHC6Q5VYS8 1495 aaKnown RBP12.71□□□□□ -0.37
UBE3A-221ENST00000630607 MFAP1P55081 439 aaKnown RBP12.7□□□□□ -0.38
UBE3A-221ENST00000630607 KDM4CQ9H3R0 1056 aa12.7□□□□□ -0.38
UBE3A-221ENST00000630607 CADPS2Q86UW7 1296 aa12.7□□□□□ -0.38
UBE3A-221ENST00000630607 POLA2Q14181 598 aa12.69□□□□□ -0.38
UBE3A-221ENST00000630607 TESPA1A2RU30 521 aaPredicted RBP12.68□□□□□ -0.38
UBE3A-221ENST00000630607 SEMA3EO15041 775 aa12.68□□□□□ -0.38
UBE3A-221ENST00000630607 RIOK3O14730 519 aaKnown RBP12.68□□□□□ -0.38
UBE3A-221ENST00000630607 BARGINQ6ZT62 677 aa12.66□□□□□ -0.38
UBE3A-221ENST00000630607 RYDENQ9NUL5 291 aaKnown RBP12.65□□□□□ -0.38
UBE3A-221ENST00000630607 ARHGEF1Q92888 912 aaKnown RBP12.63□□□□□ -0.39
UBE3A-221ENST00000630607 FLIIQ13045 1269 aa12.62□□□□□ -0.39
UBE3A-221ENST00000630607 AK7Q96M32 723 aa12.62□□□□□ -0.39
UBE3A-221ENST00000630607 GZF1Q9H116 711 aaPredicted RBP12.62□□□□□ -0.39
UBE3A-221ENST00000630607 TRAK2O60296 914 aa12.61□□□□□ -0.39
UBE3A-221ENST00000630607 E9PSI1 815 aa12.58□□□□□ -0.4
UBE3A-221ENST00000630607 CLUAP1Q96AJ1 413 aa12.58□□□□□ -0.4
UBE3A-221ENST00000630607 A6NJR5 290 aa12.56□□□□□ -0.4
UBE3A-221ENST00000630607 ONECUT3O60422 494 aaPredicted RBP12.54□□□□□ -0.4
UBE3A-221ENST00000630607 ZBTB47Q9UFB7 747 aaPredicted RBP12.53□□□□□ -0.4
UBE3A-221ENST00000630607 VGFO15240 615 aaPredicted RBP12.53□□□□□ -0.4
UBE3A-221ENST00000630607 USP35Q9P2H5 1018 aa12.52□□□□□ -0.41
UBE3A-221ENST00000630607 BCL11BQ9C0K0 894 aaPredicted RBP12.51□□□□□ -0.41
UBE3A-221ENST00000630607 STK24Q9Y6E0 443 aa12.51□□□□□ -0.41
UBE3A-221ENST00000630607 FAM117AQ9C073 453 aa12.5□□□□□ -0.41
UBE3A-221ENST00000630607 RETREG2Q8NC44 543 aa12.49□□□□□ -0.41
UBE3A-221ENST00000630607 ZNF316A6NFI3 1004 aaPredicted RBP12.48□□□□□ -0.41
UBE3A-221ENST00000630607 PDE4DQ08499 809 aa12.48□□□□□ -0.41
UBE3A-221ENST00000630607 GSE1Q14687 1217 aa12.48□□□□□ -0.41
UBE3A-221ENST00000630607 IRF5Q13568 498 aa12.47□□□□□ -0.41
UBE3A-221ENST00000630607 TRIM66O15016 1216 aa12.45□□□□□ -0.42
UBE3A-221ENST00000630607 DCAF1Q9Y4B6 1507 aa12.45□□□□□ -0.42
UBE3A-221ENST00000630607 DHX37Q8IY37 1157 aaKnown RBP12.44□□□□□ -0.42
UBE3A-221ENST00000630607 FBXW7Q969H0 707 aa12.44□□□□□ -0.42
UBE3A-221ENST00000630607 KRI1Q8N9T8 703 aaKnown RBP12.43□□□□□ -0.42
UBE3A-221ENST00000630607 E2F4Q16254 413 aa12.42□□□□□ -0.42
UBE3A-221ENST00000630607 ZNF777Q9ULD5 760 aaPredicted RBP12.42□□□□□ -0.42
UBE3A-221ENST00000630607 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.42□□□□□ -0.42
UBE3A-221ENST00000630607 PLEKHG3A1L390 1219 aa12.42□□□□□ -0.42
UBE3A-221ENST00000630607 ZFP91Q96JP5 570 aaPredicted RBP12.42□□□□□ -0.42
UBE3A-221ENST00000630607 SMYD5Q6GMV2 418 aa12.41□□□□□ -0.42
UBE3A-221ENST00000630607 FAM177A1Q8N128 213 aaPredicted RBP12.41□□□□□ -0.42
UBE3A-221ENST00000630607 SERPINA10Q9UK55 444 aa12.39□□□□□ -0.43
UBE3A-221ENST00000630607 RSPH4AQ5TD94 716 aa12.38□□□□□ -0.43
UBE3A-221ENST00000630607 CCDC97Q96F63 343 aaPredicted RBP12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms