RNA–Protein interactions for RNA: ENST00000628962.1

VPS8-228, Transcript of VPS8, CORVET complex subunit, humanhuman

TSL 5 BASIC

Gene VPS8, Length 207 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-228ENST00000628962 CCDC61Q9Y6R9 512 aa12.06□□□□□ -0.48
VPS8-228ENST00000628962 METRNQ9UJH8 293 aa12.02□□□□□ -0.49
VPS8-228ENST00000628962 C7P10643 843 aa12□□□□□ -0.49
VPS8-228ENST00000628962 SLC39A7Q92504 469 aa12□□□□□ -0.49
VPS8-228ENST00000628962 KIF12Q96FN5 646 aa12□□□□□ -0.49
VPS8-228ENST00000628962 MIER1Q8N108 512 aa11.97□□□□□ -0.49
VPS8-228ENST00000628962 PLEKHG5O94827 1062 aa11.96□□□□□ -0.49
VPS8-228ENST00000628962 POTEJP0CG39 1038 aa11.95□□□□□ -0.5
VPS8-228ENST00000628962 ATN1P54259 1190 aaPredicted RBP11.95□□□□□ -0.5
VPS8-228ENST00000628962 RASEFQ8IZ41 740 aa11.94□□□□□ -0.5
VPS8-228ENST00000628962 TRPC6Q9Y210 931 aa11.91□□□□□ -0.5
VPS8-228ENST00000628962 MAP3K13O43283 966 aa11.9□□□□□ -0.5
VPS8-228ENST00000628962 BMP2KQ9NSY1 1161 aaPredicted RBP11.9□□□□□ -0.5
VPS8-228ENST00000628962 TIE1P35590 1138 aa11.87□□□□□ -0.51
VPS8-228ENST00000628962 PLSCR2Q9NRY7 297 aa11.87□□□□□ -0.51
VPS8-228ENST00000628962 MAMSTRQ6ZN01 415 aa11.86□□□□□ -0.51
VPS8-228ENST00000628962 POTEFA5A3E0 1075 aa11.85□□□□□ -0.51
VPS8-228ENST00000628962 POTEMA6NI47 508 aa11.85□□□□□ -0.51
VPS8-228ENST00000628962 PLCD3Q8N3E9 789 aa11.84□□□□□ -0.51
VPS8-228ENST00000628962 NUBP1P53384 320 aa11.81□□□□□ -0.52
VPS8-228ENST00000628962 POTEGQ6S5H5 508 aa11.81□□□□□ -0.52
VPS8-228ENST00000628962 TTLL13PA6NNM8 815 aa11.8□□□□□ -0.52
VPS8-228ENST00000628962 SGIP1Q9BQI5 828 aa11.79□□□□□ -0.52
VPS8-228ENST00000628962 ZBTB47Q9UFB7 747 aaPredicted RBP11.79□□□□□ -0.52
VPS8-228ENST00000628962 SCUBE2Q9NQ36 999 aa11.78□□□□□ -0.52
VPS8-228ENST00000628962 FKBP8Q14318 412 aa11.74□□□□□ -0.53
VPS8-228ENST00000628962 LCE2DQ5TA82 110 aaPredicted RBP11.74□□□□□ -0.53
VPS8-228ENST00000628962 PCDHB13Q9Y5F0 798 aa11.74□□□□□ -0.53
VPS8-228ENST00000628962 COLQQ9Y215 455 aaPredicted RBP11.73□□□□□ -0.53
VPS8-228ENST00000628962 TRIM35Q9UPQ4 493 aa11.71□□□□□ -0.53
VPS8-228ENST00000628962 IER5LQ5T953 404 aa11.7□□□□□ -0.54
VPS8-228ENST00000628962 SEC24BO95487 1268 aa11.69□□□□□ -0.54
VPS8-228ENST00000628962 IFNL1Q8IU54 200 aa11.69□□□□□ -0.54
VPS8-228ENST00000628962 FAM212AQ96EL1 285 aa11.69□□□□□ -0.54
VPS8-228ENST00000628962 PCDH10Q9P2E7 1040 aa11.68□□□□□ -0.54
VPS8-228ENST00000628962 FAM163AQ96GL9 167 aaPredicted RBP11.66□□□□□ -0.54
VPS8-228ENST00000628962 TMEM106CQ9BVX2 250 aa11.61□□□□□ -0.55
VPS8-228ENST00000628962 IRX5P78411 483 aaPredicted RBP11.55□□□□□ -0.56
VPS8-228ENST00000628962 DCAF8Q5TAQ9 597 aa11.55□□□□□ -0.56
VPS8-228ENST00000628962 FBXO3Q9UK99 471 aa11.55□□□□□ -0.56
VPS8-228ENST00000628962 PYGBP11216 843 aa11.54□□□□□ -0.56
VPS8-228ENST00000628962 PLCG2P16885 1265 aa11.53□□□□□ -0.56
VPS8-228ENST00000628962 SLAIN1Q8ND83 568 aa11.5□□□□□ -0.57
VPS8-228ENST00000628962 PCDHB8Q9UN66 801 aa11.48□□□□□ -0.57
VPS8-228ENST00000628962 OCEL1Q9H607 264 aa11.46□□□□□ -0.57
VPS8-228ENST00000628962 ST18O60284 1047 aa11.43□□□□□ -0.58
VPS8-228ENST00000628962 VASPP50552 380 aaPredicted RBP11.43□□□□□ -0.58
VPS8-228ENST00000628962 CDAN1Q8IWY9 1227 aa11.41□□□□□ -0.58
VPS8-228ENST00000628962 GSE1Q14687 1217 aa11.4□□□□□ -0.58
VPS8-228ENST00000628962 KLHL34Q8N239 644 aa11.39□□□□□ -0.59
VPS8-228ENST00000628962 ZNF467Q7Z7K2 595 aaPredicted RBP11.38□□□□□ -0.59
VPS8-228ENST00000628962 CHRM1P11229 460 aaPredicted RBP11.36□□□□□ -0.59
VPS8-228ENST00000628962 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.35□□□□□ -0.59
VPS8-228ENST00000628962 PDCD7Q8N8D1 485 aaKnown RBP11.34□□□□□ -0.59
VPS8-228ENST00000628962 TMEM121BQ9BXQ6 578 aaPredicted RBP11.31□□□□□ -0.6
VPS8-228ENST00000628962 SNPHO15079 494 aa11.29□□□□□ -0.6
VPS8-228ENST00000628962 MKRN3Q13064 507 aaKnown RBP11.29□□□□□ -0.6
VPS8-228ENST00000628962 PSEN1P49768 467 aa11.28□□□□□ -0.6
VPS8-228ENST00000628962 GOLGA2Q08379 1002 aa11.27□□□□□ -0.61
VPS8-228ENST00000628962 L3MBTL3Q96JM7 780 aaPredicted RBP11.25□□□□□ -0.61
VPS8-228ENST00000628962 ILDR1Q86SU0 546 aaPredicted RBP11.24□□□□□ -0.61
VPS8-228ENST00000628962 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.24□□□□□ -0.612e-6■■■■□ 23.9
VPS8-228ENST00000628962 C3orf67Q6ZVT6 689 aa11.23□□□□□ -0.61
VPS8-228ENST00000628962 IFNLR1Q8IU57 520 aaPredicted RBP11.23□□□□□ -0.61
VPS8-228ENST00000628962 PDAP1Q13442 181 aaKnown RBP11.22□□□□□ -0.61
VPS8-228ENST00000628962 SPOCK2Q92563 424 aa11.21□□□□□ -0.61
VPS8-228ENST00000628962 MARVELD3Q96A59 401 aa11.2□□□□□ -0.62
VPS8-228ENST00000628962 CIZ1Q9ULV3 898 aaPredicted RBP11.16□□□□□ -0.62
VPS8-228ENST00000628962 DPY19L2Q6NUT2 758 aa11.15□□□□□ -0.62
VPS8-228ENST00000628962 SPNS2Q8IVW8 549 aa11.14□□□□□ -0.63
VPS8-228ENST00000628962 CABP2Q9NPB3 220 aa11.14□□□□□ -0.63
VPS8-228ENST00000628962 MMRN1Q13201 1228 aa11.13□□□□□ -0.63
VPS8-228ENST00000628962 EMP3P54852 163 aa11.1□□□□□ -0.63
VPS8-228ENST00000628962 BOLA1Q9Y3E2 137 aa11.08□□□□□ -0.64
VPS8-228ENST00000628962 POTEB3A0JP26 581 aa11.07□□□□□ -0.64
VPS8-228ENST00000628962 POTEBQ6S5H4 581 aa11.07□□□□□ -0.64
VPS8-228ENST00000628962 HS3ST6Q96QI5 342 aa11.05□□□□□ -0.64
VPS8-228ENST00000628962 FAM205CA6NFA0 338 aa11.03□□□□□ -0.64
VPS8-228ENST00000628962 G3V3G9 751 aa11.03□□□□□ -0.64
VPS8-228ENST00000628962 HOXB3P14651 431 aaPredicted RBP11.03□□□□□ -0.64
VPS8-228ENST00000628962 KRTAP3-3Q9BYR6 98 aa11.03□□□□□ -0.64
VPS8-228ENST00000628962 KRTAP3-2Q9BYR7 98 aa11.03□□□□□ -0.64
VPS8-228ENST00000628962 TRIM41Q8WV44 630 aa11.02□□□□□ -0.65
VPS8-228ENST00000628962 EFCAB3Q8N7B9 438 aa11□□□□□ -0.65
VPS8-228ENST00000628962 HOXB1P14653 301 aaPredicted RBP10.96□□□□□ -0.65
VPS8-228ENST00000628962 DOK7Q18PE1 504 aa10.93□□□□□ -0.66
VPS8-228ENST00000628962 ZNF710Q8N1W2 664 aa10.92□□□□□ -0.66
VPS8-228ENST00000628962 RNF25Q96BH1 459 aaPredicted RBP10.91□□□□□ -0.66
VPS8-228ENST00000628962 MICALL2Q8IY33 904 aa10.9□□□□□ -0.66
VPS8-228ENST00000628962 RIOK3O14730 519 aaKnown RBP10.89□□□□□ -0.67
VPS8-228ENST00000628962 TMEM92Q6UXU6 159 aa10.89□□□□□ -0.67
VPS8-228ENST00000628962 SOX12O15370 315 aa10.88□□□□□ -0.67
VPS8-228ENST00000628962 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP10.87□□□□□ -0.67
VPS8-228ENST00000628962 ZFP91Q96JP5 570 aaPredicted RBP10.87□□□□□ -0.67
VPS8-228ENST00000628962 MS4A4AQ96JQ5 239 aa10.87□□□□□ -0.67
VPS8-228ENST00000628962 ERBB3P21860 1342 aa10.86□□□□□ -0.67
VPS8-228ENST00000628962 RIMBP2O15034 1052 aa10.86□□□□□ -0.67
VPS8-228ENST00000628962 VGFO15240 615 aaPredicted RBP10.84□□□□□ -0.67
VPS8-228ENST00000628962 ZSWIM6Q9HCJ5 1215 aa10.83□□□□□ -0.68
VPS8-228ENST00000628962 PHF8Q9UPP1 1060 aa10.83□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 7.3 ms