RNA–Protein interactions for RNA: ENST00000628857.1

CNOT1-223, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 5 BASIC

Gene CNOT1, Length 291 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-223ENST00000628857 DCAF8Q5TAQ9 597 aa8.81□□□□□ -1
CNOT1-223ENST00000628857 ZNF579Q8NAF0 562 aaKnown RBP8.8□□□□□ -1
CNOT1-223ENST00000628857 CCDC61Q9Y6R9 512 aa8.8□□□□□ -1
CNOT1-223ENST00000628857 TSPYL2Q9H2G4 693 aaPredicted RBP8.79□□□□□ -1
CNOT1-223ENST00000628857 ZRANB1Q9UGI0 708 aa8.79□□□□□ -1
CNOT1-223ENST00000628857 SGIP1Q9BQI5 828 aa8.77□□□□□ -1.01
CNOT1-223ENST00000628857 CIZ1Q9ULV3 898 aaPredicted RBP8.76□□□□□ -1.01
CNOT1-223ENST00000628857 EVX2Q03828 476 aa8.74□□□□□ -1.01
CNOT1-223ENST00000628857 PKD2Q13563 968 aa8.74□□□□□ -1.01
CNOT1-223ENST00000628857 KIF12Q96FN5 646 aa8.71□□□□□ -1.02
CNOT1-223ENST00000628857 SP7Q8TDD2 431 aaPredicted RBP8.68□□□□□ -1.02
CNOT1-223ENST00000628857 ECM2O94769 699 aaPredicted RBP8.67□□□□□ -1.02
CNOT1-223ENST00000628857 PYGBP11216 843 aa8.66□□□□□ -1.02
CNOT1-223ENST00000628857 ZNF467Q7Z7K2 595 aaPredicted RBP8.66□□□□□ -1.02
CNOT1-223ENST00000628857 PHF12Q96QT6 1004 aa8.66□□□□□ -1.02
CNOT1-223ENST00000628857 RTN4Q9NQC3 1192 aaKnown RBP8.66□□□□□ -1.02
CNOT1-223ENST00000628857 MAP3K13O43283 966 aa8.65□□□□□ -1.02
CNOT1-223ENST00000628857 TAOK2Q9UL54 1235 aa8.65□□□□□ -1.02
CNOT1-223ENST00000628857 GABBR2O75899 941 aa8.63□□□□□ -1.03
CNOT1-223ENST00000628857 PCDHB13Q9Y5F0 798 aa8.63□□□□□ -1.03
CNOT1-223ENST00000628857 RIOK3O14730 519 aaKnown RBP8.6□□□□□ -1.03
CNOT1-223ENST00000628857 IFNL1Q8IU54 200 aa8.59□□□□□ -1.03
CNOT1-223ENST00000628857 MS4A3Q96HJ5 214 aa8.59□□□□□ -1.03
CNOT1-223ENST00000628857 RGL2O15211 777 aa8.57□□□□□ -1.04
CNOT1-223ENST00000628857 VGFO15240 615 aaPredicted RBP8.57□□□□□ -1.04
CNOT1-223ENST00000628857 GALR2O43603 387 aaPredicted RBP8.57□□□□□ -1.04
CNOT1-223ENST00000628857 TIE1P35590 1138 aa8.57□□□□□ -1.04
CNOT1-223ENST00000628857 RNF25Q96BH1 459 aaPredicted RBP8.57□□□□□ -1.04
CNOT1-223ENST00000628857 PDAP1Q13442 181 aaKnown RBP8.56□□□□□ -1.04
CNOT1-223ENST00000628857 PCDHB8Q9UN66 801 aa8.54□□□□□ -1.04
CNOT1-223ENST00000628857 PSEN1P49768 467 aa8.52□□□□□ -1.05
CNOT1-223ENST00000628857 ASTLQ6HA08 431 aaPredicted RBP8.52□□□□□ -1.05
CNOT1-223ENST00000628857 DCBLD2Q96PD2 775 aa8.5□□□□□ -1.05
CNOT1-223ENST00000628857 DNAJC5Q9H3Z4 198 aa8.49□□□□□ -1.05
CNOT1-223ENST00000628857 TTLL13PA6NNM8 815 aa8.48□□□□□ -1.05
CNOT1-223ENST00000628857 ATMINO43313 823 aaPredicted RBP8.48□□□□□ -1.05
CNOT1-223ENST00000628857 BMP2KQ9NSY1 1161 aaPredicted RBP8.48□□□□□ -1.05
CNOT1-223ENST00000628857 TRPC6Q9Y210 931 aa8.48□□□□□ -1.05
CNOT1-223ENST00000628857 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP8.47□□□□□ -1.05
CNOT1-223ENST00000628857 ZFP91Q96JP5 570 aaPredicted RBP8.47□□□□□ -1.05
CNOT1-223ENST00000628857 TMEM106CQ9BVX2 250 aa8.47□□□□□ -1.05
CNOT1-223ENST00000628857 HS6ST3Q8IZP7 471 aa8.46□□□□□ -1.06
CNOT1-223ENST00000628857 POTEIP0CG38 1075 aa8.43□□□□□ -1.06
CNOT1-223ENST00000628857 IER5LQ5T953 404 aa8.43□□□□□ -1.06
CNOT1-223ENST00000628857 STK25O00506 426 aa8.42□□□□□ -1.06
CNOT1-223ENST00000628857 ATN1P54259 1190 aaPredicted RBP8.42□□□□□ -1.06
CNOT1-223ENST00000628857 BCL11BQ9C0K0 894 aaPredicted RBP8.42□□□□□ -1.06
CNOT1-223ENST00000628857 TRIM35Q9UPQ4 493 aa8.41□□□□□ -1.06
CNOT1-223ENST00000628857 SOX12O15370 315 aa8.4□□□□□ -1.06
CNOT1-223ENST00000628857 C7P10643 843 aa8.4□□□□□ -1.06
CNOT1-223ENST00000628857 CHGAP10645 457 aaKnown RBP8.4□□□□□ -1.06
CNOT1-223ENST00000628857 SLC39A7Q92504 469 aa8.4□□□□□ -1.06
CNOT1-223ENST00000628857 STK24Q9Y6E0 443 aa8.39□□□□□ -1.07
CNOT1-223ENST00000628857 DCAF8L2P0C7V8 631 aa8.38□□□□□ -1.07
CNOT1-223ENST00000628857 GOLGA2Q08379 1002 aa8.38□□□□□ -1.07
CNOT1-223ENST00000628857 ILDR1Q86SU0 546 aaPredicted RBP8.38□□□□□ -1.07
CNOT1-223ENST00000628857 MKRN3Q13064 507 aaKnown RBP8.37□□□□□ -1.07
CNOT1-223ENST00000628857 BBXQ8WY36 941 aaPredicted RBP8.37□□□□□ -1.07
CNOT1-223ENST00000628857 CABP2Q9NPB3 220 aa8.37□□□□□ -1.07
CNOT1-223ENST00000628857 PELP1Q8IZL8 1130 aaKnown RBP8.36□□□□□ -1.07
CNOT1-223ENST00000628857 RYDENQ9NUL5 291 aaKnown RBP8.36□□□□□ -1.07
CNOT1-223ENST00000628857 EFCAB3Q8N7B9 438 aa8.34□□□□□ -1.07
CNOT1-223ENST00000628857 IRX5P78411 483 aaPredicted RBP8.33□□□□□ -1.08
CNOT1-223ENST00000628857 OCEL1Q9H607 264 aa8.33□□□□□ -1.08
CNOT1-223ENST00000628857 NLRP6P59044 892 aa8.31□□□□□ -1.08
CNOT1-223ENST00000628857 METRNQ9UJH8 293 aa8.31□□□□□ -1.08
CNOT1-223ENST00000628857 ZBTB4Q9P1Z0 1013 aaPredicted RBP8.3□□□□□ -1.08
CNOT1-223ENST00000628857 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP8.29□□□□□ -1.088e-13■■□□□ 13.2
CNOT1-223ENST00000628857 NKX1-1Q15270 411 aaPredicted RBP8.28□□□□□ -1.08
CNOT1-223ENST00000628857 FBXO22Q8NEZ5 403 aa8.28□□□□□ -1.08
CNOT1-223ENST00000628857 MFRPQ9BY79 579 aa8.28□□□□□ -1.08
CNOT1-223ENST00000628857 SEC24BO95487 1268 aa8.27□□□□□ -1.09
CNOT1-223ENST00000628857 PLCG2P16885 1265 aa8.27□□□□□ -1.09
CNOT1-223ENST00000628857 POTEFA5A3E0 1075 aa8.26□□□□□ -1.09
CNOT1-223ENST00000628857 PDCD7Q8N8D1 485 aaKnown RBP8.26□□□□□ -1.09
CNOT1-223ENST00000628857 L3MBTL3Q96JM7 780 aaPredicted RBP8.25□□□□□ -1.09
CNOT1-223ENST00000628857 PHF8Q9UPP1 1060 aa8.25□□□□□ -1.09
CNOT1-223ENST00000628857 COLQQ9Y215 455 aaPredicted RBP8.25□□□□□ -1.09
CNOT1-223ENST00000628857 GTPBP6O43824 516 aaPredicted RBP8.24□□□□□ -1.09
CNOT1-223ENST00000628857 SPRYD3Q8NCJ5 442 aa8.23□□□□□ -1.09
CNOT1-223ENST00000628857 MS4A4AQ96JQ5 239 aa8.23□□□□□ -1.09
CNOT1-223ENST00000628857 TMEM121BQ9BXQ6 578 aaPredicted RBP8.2□□□□□ -1.1
CNOT1-223ENST00000628857 MAMSTRQ6ZN01 415 aa8.18□□□□□ -1.1
CNOT1-223ENST00000628857 BOLA1Q9Y3E2 137 aa8.17□□□□□ -1.1
CNOT1-223ENST00000628857 DPY19L2Q6NUT2 758 aa8.16□□□□□ -1.1
CNOT1-223ENST00000628857 G3V3G9 751 aa8.15□□□□□ -1.1
CNOT1-223ENST00000628857 POTEB2H3BUK9 544 aa8.15□□□□□ -1.1
CNOT1-223ENST00000628857 PLCB2Q00722 1185 aa8.15□□□□□ -1.1
CNOT1-223ENST00000628857 PAXIP1Q6ZW49 1069 aaPredicted RBP8.15□□□□□ -1.1
CNOT1-223ENST00000628857 LHX8Q68G74 356 aa8.14□□□□□ -1.11
CNOT1-223ENST00000628857 PPP1R37O75864 691 aa8.13□□□□□ -1.11
CNOT1-223ENST00000628857 MICALL2Q8IY33 904 aa8.13□□□□□ -1.11
CNOT1-223ENST00000628857 POTEJP0CG39 1038 aa8.11□□□□□ -1.11
CNOT1-223ENST00000628857 CFAP44Q96MT7 982 aa8.11□□□□□ -1.11
CNOT1-223ENST00000628857 SCUBE2Q9NQ36 999 aa8.1□□□□□ -1.11
CNOT1-223ENST00000628857 EIF2AK3Q9NZJ5 1116 aaKnown RBP8.09□□□□□ -1.11
CNOT1-223ENST00000628857 C3orf67Q6ZVT6 689 aa8.08□□□□□ -1.12
CNOT1-223ENST00000628857 OTUD5Q96G74 571 aa8.05□□□□□ -1.12
CNOT1-223ENST00000628857 PDE4AP27815 886 aa8.04□□□□□ -1.12
CNOT1-223ENST00000628857 KIF3CO14782 793 aa8.03□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms