RNA–Protein interactions for RNA: ENST00000626874.2

CHD2-208, Transcript of chromodomain helicase DNA binding protein 2, humanhuman

TSL 1 (best) BASIC

Gene CHD2, Length 7,764 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2-208ENST00000626874 GOLGA2Q08379 1002 aa9.08□□□□□ -0.96
CHD2-208ENST00000626874 L1TD1Q5T7N2 865 aaKnown RBP9.07□□□□□ -0.96
CHD2-208ENST00000626874 TMX4Q9H1E5 349 aaPredicted RBP9.07□□□□□ -0.96
CHD2-208ENST00000626874 GOLGA6L6A8MZA4 724 aa9.06□□□□□ -0.96
CHD2-208ENST00000626874 ZBTB7CA1YPR0 619 aa9.06□□□□□ -0.96
CHD2-208ENST00000626874 MTUS2Q5JR59 1369 aa9.06□□□□□ -0.96
CHD2-208ENST00000626874 NRDCO43847 1150 aa9.05□□□□□ -0.96
CHD2-208ENST00000626874 PLEKHD1A6NEE1 506 aa9.04□□□□□ -0.96
CHD2-208ENST00000626874 ARXQ96QS3 562 aa9.04□□□□□ -0.96
CHD2-208ENST00000626874 TRIM44Q96DX7 344 aaPredicted RBP9.03□□□□□ -0.96
CHD2-208ENST00000626874 CHMP4AQ9BY43 222 aa9.03□□□□□ -0.96
CHD2-208ENST00000626874 SCRIBQ14160 1630 aa9.02□□□□□ -0.97
CHD2-208ENST00000626874 MS4A1P11836 297 aa9.02□□□□□ -0.97
CHD2-208ENST00000626874 CFAP44Q96MT7 982 aa9.02□□□□□ -0.97
CHD2-208ENST00000626874 DDRGK1Q96HY6 314 aa9.01□□□□□ -0.97
CHD2-208ENST00000626874 NUDCQ9Y266 331 aa9.01□□□□□ -0.97
CHD2-208ENST00000626874 RB1CC1Q8TDY2 1594 aa9.01□□□□□ -0.97
CHD2-208ENST00000626874 TNNT2P45379 298 aaPredicted RBP9□□□□□ -0.97
CHD2-208ENST00000626874 CCDC136Q96JN2 1154 aa9□□□□□ -0.97
CHD2-208ENST00000626874 ERCC6Q03468 1493 aa9□□□□□ -0.97
CHD2-208ENST00000626874 CCDC180Q9P1Z9 1646 aa8.99□□□□□ -0.97
CHD2-208ENST00000626874 KANK1Q14678 1352 aa8.99□□□□□ -0.97
CHD2-208ENST00000626874 HNRNPUQ00839 825 aaKnown RBP eCLIP8.98□□□□□ -0.97
CHD2-208ENST00000626874 MAPK8IP3Q9UPT6 1336 aa8.97□□□□□ -0.97
CHD2-208ENST00000626874 KNSTRNQ9Y448 316 aa8.96□□□□□ -0.98
CHD2-208ENST00000626874 FTSJ3Q8IY81 847 aaKnown RBP8.96□□□□□ -0.98
CHD2-208ENST00000626874 POGKQ9P215 609 aa8.95□□□□□ -0.98
CHD2-208ENST00000626874 FGD1P98174 961 aa8.95□□□□□ -0.98
CHD2-208ENST00000626874 CHAF1AQ13111 956 aaPredicted RBP8.95□□□□□ -0.98
CHD2-208ENST00000626874 FAM9BQ8IZU0 186 aa8.94□□□□□ -0.98
CHD2-208ENST00000626874 KDM2AQ9Y2K7 1162 aa8.94□□□□□ -0.98
CHD2-208ENST00000626874 LMOD2Q6P5Q4 547 aa8.94□□□□□ -0.98
CHD2-208ENST00000626874 ANO8Q9HCE9 1232 aaPredicted RBP8.94□□□□□ -0.98
CHD2-208ENST00000626874 TULP1O00294 542 aaPredicted RBP8.93□□□□□ -0.98
CHD2-208ENST00000626874 TRHP20396 242 aaPredicted RBP8.93□□□□□ -0.98
CHD2-208ENST00000626874 KIAA2012Q0VF49 1180 aa8.93□□□□□ -0.98
CHD2-208ENST00000626874 OS9Q13438 667 aaPredicted RBP8.93□□□□□ -0.98
CHD2-208ENST00000626874 KCNH8Q96L42 1107 aa8.92□□□□□ -0.98
CHD2-208ENST00000626874 HDAC5Q9UQL6 1122 aa8.91□□□□□ -0.98
CHD2-208ENST00000626874 PTMAP06454 111 aaKnown RBP8.91□□□□□ -0.98
CHD2-208ENST00000626874 CLSTN1O94985 981 aa8.91□□□□□ -0.98
CHD2-208ENST00000626874 MRS2Q9HD23 443 aa8.91□□□□□ -0.98
CHD2-208ENST00000626874 KCNJ4P48050 445 aa8.9□□□□□ -0.98
CHD2-208ENST00000626874 CCDC34Q96HJ3 373 aa8.9□□□□□ -0.98
CHD2-208ENST00000626874 CLIP1P30622 1438 aa8.9□□□□□ -0.98
CHD2-208ENST00000626874 MCCP23508 829 aa8.9□□□□□ -0.99
CHD2-208ENST00000626874 GTF3C3Q9Y5Q9 886 aa8.89□□□□□ -0.99
CHD2-208ENST00000626874 PLEKHG5O94827 1062 aa8.89□□□□□ -0.99
CHD2-208ENST00000626874 EEA1Q15075 1411 aa8.89□□□□□ -0.99
CHD2-208ENST00000626874 CHIC2Q9UKJ5 165 aa8.89□□□□□ -0.99
CHD2-208ENST00000626874 DCAF8L1A6NGE4 600 aa8.89□□□□□ -0.99
CHD2-208ENST00000626874 KRI1Q8N9T8 703 aaKnown RBP8.87□□□□□ -0.99
CHD2-208ENST00000626874 CFDP1Q9UEE9 299 aaPredicted RBP8.87□□□□□ -0.99
CHD2-208ENST00000626874 PPM1GO15355 546 aaPredicted RBP8.87□□□□□ -0.99
CHD2-208ENST00000626874 CALD1Q05682 793 aaKnown RBP8.87□□□□□ -0.99
CHD2-208ENST00000626874 USP35Q9P2H5 1018 aa8.87□□□□□ -0.99
CHD2-208ENST00000626874 SALL2Q9Y467 1007 aaPredicted RBP8.87□□□□□ -0.99
CHD2-208ENST00000626874 GOLGA6L4A6NEF3 574 aa8.86□□□□□ -0.99
CHD2-208ENST00000626874 FKBP8Q14318 412 aa8.85□□□□□ -0.99
CHD2-208ENST00000626874 DNTTIP2Q5QJE6 756 aaKnown RBP8.85□□□□□ -0.99
CHD2-208ENST00000626874 ISY1Q9ULR0 285 aaKnown RBP8.85□□□□□ -0.99
CHD2-208ENST00000626874 RTF1Q92541 710 aaKnown RBP8.85□□□□□ -0.99
CHD2-208ENST00000626874 HTATSF1O43719 755 aaKnown RBP8.84□□□□□ -0.99
CHD2-208ENST00000626874 G3V3G9 751 aa8.84□□□□□ -0.99
CHD2-208ENST00000626874 GNL2Q13823 731 aaKnown RBP8.84□□□□□ -0.99
CHD2-208ENST00000626874 DCAF8Q5TAQ9 597 aa8.84□□□□□ -0.99
CHD2-208ENST00000626874 FOXD1Q16676 465 aa8.83□□□□□ -1
CHD2-208ENST00000626874 DDX10Q13206 875 aaKnown RBP8.82□□□□□ -1
CHD2-208ENST00000626874 NACADO15069 1562 aa8.82□□□□□ -1
CHD2-208ENST00000626874 PRM3Q9NNZ6 103 aa8.82□□□□□ -1
CHD2-208ENST00000626874 NAP1L2Q9ULW6 460 aaPredicted RBP8.81□□□□□ -1
CHD2-208ENST00000626874 KIF27Q86VH2 1401 aa8.81□□□□□ -1
CHD2-208ENST00000626874 PTMSP20962 102 aa8.81□□□□□ -1
CHD2-208ENST00000626874 LAS1LQ9Y4W2 734 aaKnown RBP8.8□□□□□ -1
CHD2-208ENST00000626874 NCBP3Q53F19 620 aaKnown RBP8.8□□□□□ -1
CHD2-208ENST00000626874 GPATCH3Q96I76 525 aa8.8□□□□□ -1
CHD2-208ENST00000626874 BAZ1BQ9UIG0 1483 aaKnown RBP8.8□□□□□ -1
CHD2-208ENST00000626874 AEBP2Q6ZN18 517 aaPredicted RBP8.8□□□□□ -1
CHD2-208ENST00000626874 KIAA1211Q6ZU35 1233 aa8.79□□□□□ -1
CHD2-208ENST00000626874 CHMP4CQ96CF2 233 aa8.79□□□□□ -1
CHD2-208ENST00000626874 FHAD1B1AJZ9 1412 aa8.79□□□□□ -1
CHD2-208ENST00000626874 HDGFL2Q7Z4V5 671 aaPredicted RBP8.79□□□□□ -1
CHD2-208ENST00000626874 EID1Q9Y6B2 187 aa8.79□□□□□ -1
CHD2-208ENST00000626874 CARD11Q9BXL7 1154 aa8.78□□□□□ -1
CHD2-208ENST00000626874 NOC3LQ8WTT2 800 aaKnown RBP8.78□□□□□ -1
CHD2-208ENST00000626874 TMF1P82094 1093 aa8.78□□□□□ -1
CHD2-208ENST00000626874 IPO8O15397 1037 aaKnown RBP8.78□□□□□ -1
CHD2-208ENST00000626874 HSP90AB1P08238 724 aaKnown RBP8.78□□□□□ -1
CHD2-208ENST00000626874 TPM4P67936 248 aa8.78□□□□□ -1
CHD2-208ENST00000626874 CARMIL2Q6F5E8 1435 aa8.78□□□□□ -1
CHD2-208ENST00000626874 GOLGA3Q08378 1498 aa8.77□□□□□ -1
CHD2-208ENST00000626874 RGL3Q3MIN7 710 aa8.77□□□□□ -1.01
CHD2-208ENST00000626874 CSB-PGBD3P0DP91 1061 aa8.77□□□□□ -1.01
CHD2-208ENST00000626874 CEP89Q96ST8 783 aa8.77□□□□□ -1.01
CHD2-208ENST00000626874 SPAG9O60271 1321 aaKnown RBP8.77□□□□□ -1.01
CHD2-208ENST00000626874 CEP162Q5TB80 1403 aa8.77□□□□□ -1.01
CHD2-208ENST00000626874 ERICH6BQ5W0A0 696 aa8.77□□□□□ -1.01
CHD2-208ENST00000626874 CCNB3Q8WWL7 1395 aa8.76□□□□□ -1.01
CHD2-208ENST00000626874 ZCCHC6Q5VYS8 1495 aaKnown RBP8.76□□□□□ -1.01
CHD2-208ENST00000626874 WASHC2AQ641Q2 1341 aa8.76□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms