RNA–Protein interactions for RNA: ENST00000625395.1

SEC23A-215, Transcript of Sec23 homolog A, coat complex II component, humanhuman

TSL 5 BASIC

Gene SEC23A, Length 261 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC23A-215ENST00000625395 GABBR2O75899 941 aa11.87□□□□□ -0.51
SEC23A-215ENST00000625395 SPOCK2Q92563 424 aa11.87□□□□□ -0.51
SEC23A-215ENST00000625395 TSPYL2Q9H2G4 693 aaPredicted RBP11.87□□□□□ -0.51
SEC23A-215ENST00000625395 GSE1Q14687 1217 aa11.82□□□□□ -0.52
SEC23A-215ENST00000625395 PHF12Q96QT6 1004 aa11.8□□□□□ -0.52
SEC23A-215ENST00000625395 DCAF8Q5TAQ9 597 aa11.78□□□□□ -0.52
SEC23A-215ENST00000625395 KIF12Q96FN5 646 aa11.77□□□□□ -0.53
SEC23A-215ENST00000625395 SGIP1Q9BQI5 828 aa11.77□□□□□ -0.53
SEC23A-215ENST00000625395 CHRM1P11229 460 aaPredicted RBP11.72□□□□□ -0.53
SEC23A-215ENST00000625395 GALR2O43603 387 aaPredicted RBP11.71□□□□□ -0.53
SEC23A-215ENST00000625395 MAP3K13O43283 966 aa11.69□□□□□ -0.54
SEC23A-215ENST00000625395 TRIM41Q8WV44 630 aa11.69□□□□□ -0.54
SEC23A-215ENST00000625395 MS4A3Q96HJ5 214 aa11.69□□□□□ -0.54
SEC23A-215ENST00000625395 DCBLD2Q96PD2 775 aa11.65□□□□□ -0.54
SEC23A-215ENST00000625395 CIZ1Q9ULV3 898 aaPredicted RBP11.65□□□□□ -0.54
SEC23A-215ENST00000625395 PCDHB13Q9Y5F0 798 aa11.65□□□□□ -0.54
SEC23A-215ENST00000625395 PYGBP11216 843 aa11.63□□□□□ -0.55
SEC23A-215ENST00000625395 POTEIP0CG38 1075 aa11.6□□□□□ -0.55
SEC23A-215ENST00000625395 TIE1P35590 1138 aa11.59□□□□□ -0.55
SEC23A-215ENST00000625395 ASTLQ6HA08 431 aaPredicted RBP11.59□□□□□ -0.55
SEC23A-215ENST00000625395 ZNF467Q7Z7K2 595 aaPredicted RBP11.59□□□□□ -0.55
SEC23A-215ENST00000625395 IFNL1Q8IU54 200 aa11.58□□□□□ -0.56
SEC23A-215ENST00000625395 ATMINO43313 823 aaPredicted RBP11.53□□□□□ -0.56
SEC23A-215ENST00000625395 BMP2KQ9NSY1 1161 aaPredicted RBP11.51□□□□□ -0.57
SEC23A-215ENST00000625395 TRPC6Q9Y210 931 aa11.5□□□□□ -0.57
SEC23A-215ENST00000625395 PCDHB8Q9UN66 801 aa11.49□□□□□ -0.57
SEC23A-215ENST00000625395 TTLL13PA6NNM8 815 aa11.48□□□□□ -0.57
SEC23A-215ENST00000625395 ATN1P54259 1190 aaPredicted RBP11.46□□□□□ -0.57
SEC23A-215ENST00000625395 PKD2Q13563 968 aa11.46□□□□□ -0.57
SEC23A-215ENST00000625395 SLC39A7Q92504 469 aa11.45□□□□□ -0.58
SEC23A-215ENST00000625395 C7P10643 843 aa11.44□□□□□ -0.58
SEC23A-215ENST00000625395 PDAP1Q13442 181 aaKnown RBP11.44□□□□□ -0.58
SEC23A-215ENST00000625395 PELP1Q8IZL8 1130 aaKnown RBP11.44□□□□□ -0.58
SEC23A-215ENST00000625395 TMEM106CQ9BVX2 250 aa11.44□□□□□ -0.58
SEC23A-215ENST00000625395 RIOK3O14730 519 aaKnown RBP11.42□□□□□ -0.58
SEC23A-215ENST00000625395 IER5LQ5T953 404 aa11.42□□□□□ -0.58
SEC23A-215ENST00000625395 ECM2O94769 699 aaPredicted RBP11.41□□□□□ -0.58
SEC23A-215ENST00000625395 PSEN1P49768 467 aa11.41□□□□□ -0.58
SEC23A-215ENST00000625395 TAOK2Q9UL54 1235 aa11.41□□□□□ -0.58
SEC23A-215ENST00000625395 RNF25Q96BH1 459 aaPredicted RBP11.39□□□□□ -0.59
SEC23A-215ENST00000625395 TRIM35Q9UPQ4 493 aa11.39□□□□□ -0.59
SEC23A-215ENST00000625395 VGFO15240 615 aaPredicted RBP11.38□□□□□ -0.59
SEC23A-215ENST00000625395 METRNQ9UJH8 293 aa11.37□□□□□ -0.59
SEC23A-215ENST00000625395 LHX8Q68G74 356 aa11.31□□□□□ -0.6
SEC23A-215ENST00000625395 RGL2O15211 777 aa11.29□□□□□ -0.6
SEC23A-215ENST00000625395 GOLGA2Q08379 1002 aa11.29□□□□□ -0.6
SEC23A-215ENST00000625395 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.27□□□□□ -0.61
SEC23A-215ENST00000625395 IRX5P78411 483 aaPredicted RBP11.27□□□□□ -0.61
SEC23A-215ENST00000625395 MKRN3Q13064 507 aaKnown RBP11.27□□□□□ -0.61
SEC23A-215ENST00000625395 ZFP91Q96JP5 570 aaPredicted RBP11.27□□□□□ -0.61
SEC23A-215ENST00000625395 POTEFA5A3E0 1075 aa11.26□□□□□ -0.61
SEC23A-215ENST00000625395 SEC24BO95487 1268 aa11.26□□□□□ -0.61
SEC23A-215ENST00000625395 AMER1Q5JTC6 1135 aaPredicted RBP11.24□□□□□ -0.61
SEC23A-215ENST00000625395 ILDR1Q86SU0 546 aaPredicted RBP11.24□□□□□ -0.61
SEC23A-215ENST00000625395 OCEL1Q9H607 264 aa11.24□□□□□ -0.61
SEC23A-215ENST00000625395 CABP2Q9NPB3 220 aa11.24□□□□□ -0.61
SEC23A-215ENST00000625395 COLQQ9Y215 455 aaPredicted RBP11.23□□□□□ -0.61
SEC23A-215ENST00000625395 PLCG2P16885 1265 aa11.22□□□□□ -0.61
SEC23A-215ENST00000625395 POTEB2H3BUK9 544 aa11.21□□□□□ -0.61
SEC23A-215ENST00000625395 SOX12O15370 315 aa11.19□□□□□ -0.62
SEC23A-215ENST00000625395 MAMSTRQ6ZN01 415 aa11.19□□□□□ -0.62
SEC23A-215ENST00000625395 BCL11BQ9C0K0 894 aaPredicted RBP11.18□□□□□ -0.62
SEC23A-215ENST00000625395 STK25O00506 426 aa11.17□□□□□ -0.62
SEC23A-215ENST00000625395 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.17□□□□□ -0.624e-14■□□□□ 11.1
SEC23A-215ENST00000625395 EFCAB3Q8N7B9 438 aa11.16□□□□□ -0.62
SEC23A-215ENST00000625395 PDCD7Q8N8D1 485 aaKnown RBP11.16□□□□□ -0.62
SEC23A-215ENST00000625395 STK24Q9Y6E0 443 aa11.15□□□□□ -0.62
SEC23A-215ENST00000625395 HS6ST3Q8IZP7 471 aa11.14□□□□□ -0.63
SEC23A-215ENST00000625395 POTEJP0CG39 1038 aa11.13□□□□□ -0.63
SEC23A-215ENST00000625395 DNAJC5Q9H3Z4 198 aa11.12□□□□□ -0.63
SEC23A-215ENST00000625395 OTUD5Q96G74 571 aa11.11□□□□□ -0.63
SEC23A-215ENST00000625395 L3MBTL3Q96JM7 780 aaPredicted RBP11.11□□□□□ -0.63
SEC23A-215ENST00000625395 SCUBE2Q9NQ36 999 aa11.11□□□□□ -0.63
SEC23A-215ENST00000625395 RTN4Q9NQC3 1192 aaKnown RBP11.08□□□□□ -0.64
SEC23A-215ENST00000625395 NLRP6P59044 892 aa11.07□□□□□ -0.64
SEC23A-215ENST00000625395 CHGAP10645 457 aaKnown RBP11.05□□□□□ -0.64
SEC23A-215ENST00000625395 FBXO22Q8NEZ5 403 aa11.04□□□□□ -0.64
SEC23A-215ENST00000625395 PHF8Q9UPP1 1060 aa11.04□□□□□ -0.64
SEC23A-215ENST00000625395 MFRPQ9BY79 579 aa11.03□□□□□ -0.64
SEC23A-215ENST00000625395 MS4A4AQ96JQ5 239 aa11.02□□□□□ -0.65
SEC23A-215ENST00000625395 DPY19L2Q6NUT2 758 aa11.01□□□□□ -0.65
SEC23A-215ENST00000625395 TMEM121BQ9BXQ6 578 aaPredicted RBP11□□□□□ -0.65
SEC23A-215ENST00000625395 BOLA1Q9Y3E2 137 aa11□□□□□ -0.65
SEC23A-215ENST00000625395 G3V3G9 751 aa10.99□□□□□ -0.65
SEC23A-215ENST00000625395 RYDENQ9NUL5 291 aaKnown RBP10.98□□□□□ -0.65
SEC23A-215ENST00000625395 EIF2AK3Q9NZJ5 1116 aaKnown RBP10.98□□□□□ -0.65
SEC23A-215ENST00000625395 C3orf67Q6ZVT6 689 aa10.96□□□□□ -0.65
SEC23A-215ENST00000625395 DCAF8L2P0C7V8 631 aa10.95□□□□□ -0.66
SEC23A-215ENST00000625395 MICALL2Q8IY33 904 aa10.92□□□□□ -0.66
SEC23A-215ENST00000625395 SLAIN1Q8ND83 568 aa10.92□□□□□ -0.66
SEC23A-215ENST00000625395 NKX1-1Q15270 411 aaPredicted RBP10.91□□□□□ -0.66
SEC23A-215ENST00000625395 BBXQ8WY36 941 aaPredicted RBP10.86□□□□□ -0.67
SEC23A-215ENST00000625395 SNPHO15079 494 aa10.84□□□□□ -0.67
SEC23A-215ENST00000625395 GTPBP6O43824 516 aaPredicted RBP10.82□□□□□ -0.68
SEC23A-215ENST00000625395 PPP1R37O75864 691 aa10.82□□□□□ -0.68
SEC23A-215ENST00000625395 TMEM92Q6UXU6 159 aa10.77□□□□□ -0.69
SEC23A-215ENST00000625395 KIF3CO14782 793 aa10.75□□□□□ -0.69
SEC23A-215ENST00000625395 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.75□□□□□ -0.69
SEC23A-215ENST00000625395 DOK7Q18PE1 504 aa10.7□□□□□ -0.7
SEC23A-215ENST00000625395 LCE2DQ5TA82 110 aaPredicted RBP10.7□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms