RNA–Protein interactions for RNA: ENST00000625063.3

ATRX-219, Transcript of ATRX, chromatin remodeler, humanhuman

TSL 5

Gene ATRX, Length 593 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATRX-219ENST00000625063 ZBTB47Q9UFB7 747 aaPredicted RBP12.95□□□□□ -0.34
ATRX-219ENST00000625063 NUBP1P53384 320 aa12.93□□□□□ -0.34
ATRX-219ENST00000625063 CCDC180Q9P1Z9 1646 aa12.89□□□□□ -0.35
ATRX-219ENST00000625063 KLHL34Q8N239 644 aa12.89□□□□□ -0.35
ATRX-219ENST00000625063 PLSCR2Q9NRY7 297 aa12.89□□□□□ -0.35
ATRX-219ENST00000625063 CCDC61Q9Y6R9 512 aa12.88□□□□□ -0.35
ATRX-219ENST00000625063 GALR2O43603 387 aaPredicted RBP12.87□□□□□ -0.35
ATRX-219ENST00000625063 IFNLR1Q8IU57 520 aaPredicted RBP12.86□□□□□ -0.35
ATRX-219ENST00000625063 CLCN6P51797 869 aa12.82□□□□□ -0.36
ATRX-219ENST00000625063 DCBLD2Q96PD2 775 aa12.81□□□□□ -0.36
ATRX-219ENST00000625063 FAM212AQ96EL1 285 aa12.8□□□□□ -0.36
ATRX-219ENST00000625063 MS4A3Q96HJ5 214 aa12.8□□□□□ -0.36
ATRX-219ENST00000625063 KIF12Q96FN5 646 aa12.78□□□□□ -0.36
ATRX-219ENST00000625063 DCAF8Q5TAQ9 597 aa12.76□□□□□ -0.37
ATRX-219ENST00000625063 MAP3K13O43283 966 aa12.74□□□□□ -0.37
ATRX-219ENST00000625063 SPOCK2Q92563 424 aa12.73□□□□□ -0.37
ATRX-219ENST00000625063 PYGBP11216 843 aa12.68□□□□□ -0.38
ATRX-219ENST00000625063 TRPC6Q9Y210 931 aa12.68□□□□□ -0.38
ATRX-219ENST00000625063 PCDHB13Q9Y5F0 798 aa12.65□□□□□ -0.38
ATRX-219ENST00000625063 GSE1Q14687 1217 aa12.63□□□□□ -0.39
ATRX-219ENST00000625063 OTUD5Q96G74 571 aa12.62□□□□□ -0.39
ATRX-219ENST00000625063 CIZ1Q9ULV3 898 aaPredicted RBP12.62□□□□□ -0.39
ATRX-219ENST00000625063 IFNL1Q8IU54 200 aa12.61□□□□□ -0.39
ATRX-219ENST00000625063 PELP1Q8IZL8 1130 aaKnown RBP12.6□□□□□ -0.39
ATRX-219ENST00000625063 ATMINO43313 823 aaPredicted RBP12.58□□□□□ -0.4
ATRX-219ENST00000625063 BMP2KQ9NSY1 1161 aaPredicted RBP12.58□□□□□ -0.4
ATRX-219ENST00000625063 ASTLQ6HA08 431 aaPredicted RBP12.57□□□□□ -0.4
ATRX-219ENST00000625063 SGIP1Q9BQI5 828 aa12.57□□□□□ -0.4
ATRX-219ENST00000625063 RB1CC1Q8TDY2 1594 aa12.56□□□□□ -0.4
ATRX-219ENST00000625063 POTEB2H3BUK9 544 aa12.56□□□□□ -0.4
ATRX-219ENST00000625063 PCDHB8Q9UN66 801 aa12.55□□□□□ -0.4
ATRX-219ENST00000625063 ATN1P54259 1190 aaPredicted RBP12.54□□□□□ -0.4
ATRX-219ENST00000625063 POTEMA6NI47 508 aa12.52□□□□□ -0.41
ATRX-219ENST00000625063 TIE1P35590 1138 aa12.52□□□□□ -0.41
ATRX-219ENST00000625063 TTLL13PA6NNM8 815 aa12.51□□□□□ -0.41
ATRX-219ENST00000625063 CHRM1P11229 460 aaPredicted RBP12.49□□□□□ -0.41
ATRX-219ENST00000625063 POTEGQ6S5H5 508 aa12.47□□□□□ -0.41
ATRX-219ENST00000625063 TMEM106CQ9BVX2 250 aa12.46□□□□□ -0.41
ATRX-219ENST00000625063 METRNQ9UJH8 293 aa12.44□□□□□ -0.42
ATRX-219ENST00000625063 ZNF467Q7Z7K2 595 aaPredicted RBP12.43□□□□□ -0.42
ATRX-219ENST00000625063 TRIM35Q9UPQ4 493 aa12.43□□□□□ -0.42
ATRX-219ENST00000625063 SLC39A7Q92504 469 aa12.42□□□□□ -0.42
ATRX-219ENST00000625063 C7P10643 843 aa12.4□□□□□ -0.42
ATRX-219ENST00000625063 DNAJC5Q9H3Z4 198 aa12.38□□□□□ -0.43
ATRX-219ENST00000625063 TRIM41Q8WV44 630 aa12.37□□□□□ -0.43
ATRX-219ENST00000625063 DCAF8L2P0C7V8 631 aa12.36□□□□□ -0.43
ATRX-219ENST00000625063 NACADO15069 1562 aa12.35□□□□□ -0.43
ATRX-219ENST00000625063 POTEFA5A3E0 1075 aa12.35□□□□□ -0.43
ATRX-219ENST00000625063 PSEN1P49768 467 aa12.35□□□□□ -0.43
ATRX-219ENST00000625063 RNF25Q96BH1 459 aaPredicted RBP12.34□□□□□ -0.43
ATRX-219ENST00000625063 COLQQ9Y215 455 aaPredicted RBP12.33□□□□□ -0.44
ATRX-219ENST00000625063 PDAP1Q13442 181 aaKnown RBP12.32□□□□□ -0.44
ATRX-219ENST00000625063 PKD2Q13563 968 aa12.3□□□□□ -0.44
ATRX-219ENST00000625063 POTEJP0CG39 1038 aa12.29□□□□□ -0.44
ATRX-219ENST00000625063 SEC24BO95487 1268 aa12.28□□□□□ -0.44
ATRX-219ENST00000625063 IER5LQ5T953 404 aa12.28□□□□□ -0.44
ATRX-219ENST00000625063 PCDH10Q9P2E7 1040 aa12.28□□□□□ -0.44
ATRX-219ENST00000625063 RIOK3O14730 519 aaKnown RBP12.27□□□□□ -0.45
ATRX-219ENST00000625063 ECM2O94769 699 aaPredicted RBP12.27□□□□□ -0.45
ATRX-219ENST00000625063 IRX5P78411 483 aaPredicted RBP12.23□□□□□ -0.45
ATRX-219ENST00000625063 MAMSTRQ6ZN01 415 aa12.22□□□□□ -0.45
ATRX-219ENST00000625063 CABP2Q9NPB3 220 aa12.22□□□□□ -0.45
ATRX-219ENST00000625063 UNC13AQ9UPW8 1703 aa12.22□□□□□ -0.45
ATRX-219ENST00000625063 PLCG2P16885 1265 aa12.21□□□□□ -0.45
ATRX-219ENST00000625063 GOLGA2Q08379 1002 aa12.21□□□□□ -0.45
ATRX-219ENST00000625063 LCE2DQ5TA82 110 aaPredicted RBP12.21□□□□□ -0.45
ATRX-219ENST00000625063 BICRAQ9NZM4 1560 aa12.21□□□□□ -0.46
ATRX-219ENST00000625063 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.19□□□□□ -0.46
ATRX-219ENST00000625063 RGL2O15211 777 aa12.19□□□□□ -0.46
ATRX-219ENST00000625063 MKRN3Q13064 507 aaKnown RBP12.19□□□□□ -0.46
ATRX-219ENST00000625063 ZFP91Q96JP5 570 aaPredicted RBP12.19□□□□□ -0.46
ATRX-219ENST00000625063 CECR2Q9BXF3 1484 aa12.19□□□□□ -0.46
ATRX-219ENST00000625063 VGFO15240 615 aaPredicted RBP12.17□□□□□ -0.46
ATRX-219ENST00000625063 FAM163AQ96GL9 167 aaPredicted RBP12.17□□□□□ -0.46
ATRX-219ENST00000625063 OCEL1Q9H607 264 aa12.16□□□□□ -0.46
ATRX-219ENST00000625063 SCUBE2Q9NQ36 999 aa12.15□□□□□ -0.46
ATRX-219ENST00000625063 PDCD7Q8N8D1 485 aaKnown RBP12.14□□□□□ -0.47
ATRX-219ENST00000625063 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.13□□□□□ -0.472e-9■■■■□ 24.8
ATRX-219ENST00000625063 EFCAB3Q8N7B9 438 aa12.12□□□□□ -0.47
ATRX-219ENST00000625063 CC2D2AQ9P2K1 1620 aa12.11□□□□□ -0.47
ATRX-219ENST00000625063 BCL11BQ9C0K0 894 aaPredicted RBP12.09□□□□□ -0.47
ATRX-219ENST00000625063 DPY19L2Q6NUT2 758 aa12.07□□□□□ -0.48
ATRX-219ENST00000625063 ILDR1Q86SU0 546 aaPredicted RBP12.06□□□□□ -0.48
ATRX-219ENST00000625063 STK25O00506 426 aa12.05□□□□□ -0.48
ATRX-219ENST00000625063 STK24Q9Y6E0 443 aa12.05□□□□□ -0.48
ATRX-219ENST00000625063 TAOK2Q9UL54 1235 aa12.04□□□□□ -0.48
ATRX-219ENST00000625063 PHF8Q9UPP1 1060 aa12□□□□□ -0.49
ATRX-219ENST00000625063 MYO15BQ96JP2 1530 aa12□□□□□ -0.49
ATRX-219ENST00000625063 MS4A4AQ96JQ5 239 aa11.97□□□□□ -0.49
ATRX-219ENST00000625063 SHROOM4Q9ULL8 1493 aa11.96□□□□□ -0.49
ATRX-219ENST00000625063 SOX12O15370 315 aa11.96□□□□□ -0.49
ATRX-219ENST00000625063 SLAIN1Q8ND83 568 aa11.96□□□□□ -0.49
ATRX-219ENST00000625063 L3MBTL3Q96JM7 780 aaPredicted RBP11.96□□□□□ -0.49
ATRX-219ENST00000625063 EIF4G1Q04637 1599 aaKnown RBP11.96□□□□□ -0.5
ATRX-219ENST00000625063 CDAN1Q8IWY9 1227 aa11.93□□□□□ -0.5
ATRX-219ENST00000625063 C3orf67Q6ZVT6 689 aa11.92□□□□□ -0.5
ATRX-219ENST00000625063 MFRPQ9BY79 579 aa11.92□□□□□ -0.5
ATRX-219ENST00000625063 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.92□□□□□ -0.5
ATRX-219ENST00000625063 BOLA1Q9Y3E2 137 aa11.92□□□□□ -0.5
ATRX-219ENST00000625063 FBXO22Q8NEZ5 403 aa11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms