RNA–Protein interactions for RNA: ENST00000623324.1

CU638689.4-208, humanhuman

TSL 1 (best) BASIC

Gene CU638689.4, Length 936 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CU638689.4-208ENST00000623324 POTEIP0CG38 1075 aa17.92■□□□□ 0.46
CU638689.4-208ENST00000623324 ZRANB1Q9UGI0 708 aa17.88■□□□□ 0.45
CU638689.4-208ENST00000623324 ERCC6Q03468 1493 aa17.86■□□□□ 0.45
CU638689.4-208ENST00000623324 CUX2O14529 1486 aa17.85■□□□□ 0.45
CU638689.4-208ENST00000623324 ZNF579Q8NAF0 562 aaKnown RBP17.85■□□□□ 0.45
CU638689.4-208ENST00000623324 NCAPD3P42695 1498 aa17.81■□□□□ 0.44
CU638689.4-208ENST00000623324 ATAD2BQ9ULI0 1458 aa17.75■□□□□ 0.43
CU638689.4-208ENST00000623324 GALR2O43603 387 aaPredicted RBP17.72■□□□□ 0.43
CU638689.4-208ENST00000623324 PHF12Q96QT6 1004 aa17.72■□□□□ 0.43
CU638689.4-208ENST00000623324 SMARCA2P51531 1590 aa17.7■□□□□ 0.42
CU638689.4-208ENST00000623324 SMARCA4P51532 1647 aa17.69■□□□□ 0.42
CU638689.4-208ENST00000623324 HMGXB3Q12766 1538 aa17.69■□□□□ 0.42
CU638689.4-208ENST00000623324 NPM1P06748 294 aaKnown RBP eCLIP17.68■□□□□ 0.42
CU638689.4-208ENST00000623324 CLCN6P51797 869 aa17.68■□□□□ 0.42
CU638689.4-208ENST00000623324 NESP48681 1621 aa17.68■□□□□ 0.42
CU638689.4-208ENST00000623324 LHX8Q68G74 356 aa17.67■□□□□ 0.42
CU638689.4-208ENST00000623324 DCBLD2Q96PD2 775 aa17.6■□□□□ 0.41
CU638689.4-208ENST00000623324 BAZ1BQ9UIG0 1483 aaKnown RBP17.6■□□□□ 0.41
CU638689.4-208ENST00000623324 PAK3O75914 559 aaPredicted RBP17.59■□□□□ 0.41
CU638689.4-208ENST00000623324 BAZ1AQ9NRL2 1556 aaPredicted RBP17.57■□□□□ 0.4
CU638689.4-208ENST00000623324 FKBP8Q14318 412 aa17.54■□□□□ 0.4
CU638689.4-208ENST00000623324 THOC2Q8NI27 1593 aaKnown RBP17.53■□□□□ 0.4
CU638689.4-208ENST00000623324 TSPYL2Q9H2G4 693 aaPredicted RBP17.5■□□□□ 0.39
CU638689.4-208ENST00000623324 MIER1Q8N108 512 aa17.49■□□□□ 0.39
CU638689.4-208ENST00000623324 PEG3Q9GZU2 1588 aa17.48■□□□□ 0.39
CU638689.4-208ENST00000623324 MS4A3Q96HJ5 214 aa17.47■□□□□ 0.39
CU638689.4-208ENST00000623324 LAMC3Q9Y6N6 1575 aa17.47■□□□□ 0.39
CU638689.4-208ENST00000623324 CCDC61Q9Y6R9 512 aa17.45■□□□□ 0.38
CU638689.4-208ENST00000623324 MROH2BQ7Z745 1585 aa17.44■□□□□ 0.38
CU638689.4-208ENST00000623324 PELP1Q8IZL8 1130 aaKnown RBP17.43■□□□□ 0.38
CU638689.4-208ENST00000623324 KIF21AQ7Z4S6 1674 aa17.42■□□□□ 0.38
CU638689.4-208ENST00000623324 RASEFQ8IZ41 740 aa17.42■□□□□ 0.38
CU638689.4-208ENST00000623324 PDS5BQ9NTI5 1447 aa17.38■□□□□ 0.37
CU638689.4-208ENST00000623324 POTEB2H3BUK9 544 aa17.35■□□□□ 0.37
CU638689.4-208ENST00000623324 PLCD3Q8N3E9 789 aa17.33■□□□□ 0.36
CU638689.4-208ENST00000623324 KIF12Q96FN5 646 aa17.33■□□□□ 0.36
CU638689.4-208ENST00000623324 PLEKHG5O94827 1062 aa17.3■□□□□ 0.36
CU638689.4-208ENST00000623324 ASTLQ6HA08 431 aaPredicted RBP17.29■□□□□ 0.36
CU638689.4-208ENST00000623324 TRPC6Q9Y210 931 aa17.29■□□□□ 0.36
CU638689.4-208ENST00000623324 ATMINO43313 823 aaPredicted RBP17.28■□□□□ 0.36
CU638689.4-208ENST00000623324 TRIM41Q8WV44 630 aa17.28■□□□□ 0.36
CU638689.4-208ENST00000623324 CADPSQ9ULU8 1353 aa17.28■□□□□ 0.36
CU638689.4-208ENST00000623324 MRC2Q9UBG0 1479 aa17.27■□□□□ 0.36
CU638689.4-208ENST00000623324 NUBP1P53384 320 aa17.25■□□□□ 0.35
CU638689.4-208ENST00000623324 MAP3K13O43283 966 aa17.24■□□□□ 0.35
CU638689.4-208ENST00000623324 WDR62O43379 1518 aa17.22■□□□□ 0.35
CU638689.4-208ENST00000623324 WIZO95785 1651 aa17.22■□□□□ 0.35
CU638689.4-208ENST00000623324 OTUD5Q96G74 571 aa17.2■□□□□ 0.34
CU638689.4-208ENST00000623324 ATN1P54259 1190 aaPredicted RBP17.18■□□□□ 0.34
CU638689.4-208ENST00000623324 METRNQ9UJH8 293 aa17.16■□□□□ 0.34
CU638689.4-208ENST00000623324 CEP164Q9UPV0 1460 aa17.16■□□□□ 0.34
CU638689.4-208ENST00000623324 BMP2KQ9NSY1 1161 aaPredicted RBP17.15■□□□□ 0.34
CU638689.4-208ENST00000623324 POTEJP0CG39 1038 aa17.13■□□□□ 0.33
CU638689.4-208ENST00000623324 FANCD2Q9BXW9 1451 aa17.12■□□□□ 0.33
CU638689.4-208ENST00000623324 ZBTB47Q9UFB7 747 aaPredicted RBP17.09■□□□□ 0.33
CU638689.4-208ENST00000623324 SLC39A7Q92504 469 aa17.08■□□□□ 0.32
CU638689.4-208ENST00000623324 POTEFA5A3E0 1075 aa17.06■□□□□ 0.32
CU638689.4-208ENST00000623324 C7P10643 843 aa17.06■□□□□ 0.32
CU638689.4-208ENST00000623324 CFTRP13569 1480 aa17.03■□□□□ 0.32
CU638689.4-208ENST00000623324 TIE1P35590 1138 aa17.02■□□□□ 0.32
CU638689.4-208ENST00000623324 PCDHB13Q9Y5F0 798 aa17.01■□□□□ 0.31
CU638689.4-208ENST00000623324 TTLL13PA6NNM8 815 aa17■□□□□ 0.31
CU638689.4-208ENST00000623324 FBXO3Q9UK99 471 aa17■□□□□ 0.31
CU638689.4-208ENST00000623324 IFNL1Q8IU54 200 aa16.99■□□□□ 0.31
CU638689.4-208ENST00000623324 TOP2AP11388 1531 aaKnown RBP16.99■□□□□ 0.31
CU638689.4-208ENST00000623324 URB2Q14146 1524 aaKnown RBP16.99■□□□□ 0.31
CU638689.4-208ENST00000623324 FAM212AQ96EL1 285 aa16.98■□□□□ 0.31
CU638689.4-208ENST00000623324 RSF1Q96T23 1441 aaPredicted RBP16.96■□□□□ 0.31
CU638689.4-208ENST00000623324 SGIP1Q9BQI5 828 aa16.95■□□□□ 0.3
CU638689.4-208ENST00000623324 VASPP50552 380 aaPredicted RBP16.94■□□□□ 0.3
CU638689.4-208ENST00000623324 COLQQ9Y215 455 aaPredicted RBP16.91■□□□□ 0.3
CU638689.4-208ENST00000623324 PYGBP11216 843 aa16.88■□□□□ 0.29
CU638689.4-208ENST00000623324 DCAF8Q5TAQ9 597 aa16.88■□□□□ 0.29
CU638689.4-208ENST00000623324 TRIM35Q9UPQ4 493 aa16.88■□□□□ 0.29
CU638689.4-208ENST00000623324 PRDM2Q13029 1718 aa16.84■□□□□ 0.29
CU638689.4-208ENST00000623324 RIMBP3CA6NJZ7 1639 aa16.83■□□□□ 0.28
CU638689.4-208ENST00000623324 RIMBP3BA6NNM3 1639 aa16.83■□□□□ 0.28
CU638689.4-208ENST00000623324 RIMBP3Q9UFD9 1639 aa16.83■□□□□ 0.28
CU638689.4-208ENST00000623324 ZNF608Q9ULD9 1512 aaPredicted RBP16.83■□□□□ 0.28
CU638689.4-208ENST00000623324 IFT140Q96RY7 1462 aa16.81■□□□□ 0.28
CU638689.4-208ENST00000623324 KLHL34Q8N239 644 aa16.8■□□□□ 0.28
CU638689.4-208ENST00000623324 TMEM106CQ9BVX2 250 aa16.8■□□□□ 0.28
CU638689.4-208ENST00000623324 CCDC88BA6NC98 1476 aa16.79■□□□□ 0.28
CU638689.4-208ENST00000623324 PCDHB8Q9UN66 801 aa16.78■□□□□ 0.28
CU638689.4-208ENST00000623324 TOPBP1Q92547 1522 aa16.76■□□□□ 0.27
CU638689.4-208ENST00000623324 ARHGEF11O15085 1522 aa16.75■□□□□ 0.27
CU638689.4-208ENST00000623324 EIF4G3O43432 1585 aaKnown RBP16.73■□□□□ 0.27
CU638689.4-208ENST00000623324 SEC24BO95487 1268 aa16.73■□□□□ 0.27
CU638689.4-208ENST00000623324 MAMSTRQ6ZN01 415 aa16.73■□□□□ 0.27
CU638689.4-208ENST00000623324 IFNLR1Q8IU57 520 aaPredicted RBP16.73■□□□□ 0.27
CU638689.4-208ENST00000623324 IER5LQ5T953 404 aa16.72■□□□□ 0.27
CU638689.4-208ENST00000623324 LCE2DQ5TA82 110 aaPredicted RBP16.7■□□□□ 0.26
CU638689.4-208ENST00000623324 SCUBE2Q9NQ36 999 aa16.69■□□□□ 0.26
CU638689.4-208ENST00000623324 DNMBPQ6XZF7 1577 aa16.68■□□□□ 0.26
CU638689.4-208ENST00000623324 ABCC8Q09428 1581 aa16.66■□□□□ 0.26
CU638689.4-208ENST00000623324 IRX5P78411 483 aaPredicted RBP16.65■□□□□ 0.26
CU638689.4-208ENST00000623324 POTEMA6NI47 508 aa16.64■□□□□ 0.25
CU638689.4-208ENST00000623324 AQRO60306 1485 aaKnown RBP eCLIP16.64■□□□□ 0.25
CU638689.4-208ENST00000623324 CHD1O14646 1710 aa16.64■□□□□ 0.25
CU638689.4-208ENST00000623324 GSE1Q14687 1217 aa16.63■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms