RNA–Protein interactions for RNA: ENST00000622329.1

RNU6-538P-201, Transcript of RNA, U6 small nuclear 538, pseudogene, humanhuman

BASIC

Gene RNU6-538P, Length 107 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-538P-201ENST00000622329 ATMINO43313 823 aaPredicted RBP14.25□□□□□ -0.13
RNU6-538P-201ENST00000622329 POTEJP0CG39 1038 aa14.2□□□□□ -0.14
RNU6-538P-201ENST00000622329 RASEFQ8IZ41 740 aa14.2□□□□□ -0.14
RNU6-538P-201ENST00000622329 KIF12Q96FN5 646 aa14.2□□□□□ -0.14
RNU6-538P-201ENST00000622329 TRPC6Q9Y210 931 aa14.18□□□□□ -0.14
RNU6-538P-201ENST00000622329 MIER1Q8N108 512 aa14.15□□□□□ -0.14
RNU6-538P-201ENST00000622329 METRNQ9UJH8 293 aa14.15□□□□□ -0.14
RNU6-538P-201ENST00000622329 ATN1P54259 1190 aaPredicted RBP14.13□□□□□ -0.15
RNU6-538P-201ENST00000622329 MAP3K13O43283 966 aa14.11□□□□□ -0.15
RNU6-538P-201ENST00000622329 POTEFA5A3E0 1075 aa14.09□□□□□ -0.15
RNU6-538P-201ENST00000622329 SLC39A7Q92504 469 aa14.09□□□□□ -0.15
RNU6-538P-201ENST00000622329 BMP2KQ9NSY1 1161 aaPredicted RBP14.09□□□□□ -0.15
RNU6-538P-201ENST00000622329 C7P10643 843 aa14.08□□□□□ -0.16
RNU6-538P-201ENST00000622329 NUBP1P53384 320 aa14.05□□□□□ -0.16
RNU6-538P-201ENST00000622329 FKBP8Q14318 412 aa14.01□□□□□ -0.17
RNU6-538P-201ENST00000622329 PLEKHG5O94827 1062 aa14□□□□□ -0.17
RNU6-538P-201ENST00000622329 PLCD3Q8N3E9 789 aa13.99□□□□□ -0.17
RNU6-538P-201ENST00000622329 TIE1P35590 1138 aa13.98□□□□□ -0.17
RNU6-538P-201ENST00000622329 TTLL13PA6NNM8 815 aa13.95□□□□□ -0.18
RNU6-538P-201ENST00000622329 LCE2DQ5TA82 110 aaPredicted RBP13.93□□□□□ -0.18
RNU6-538P-201ENST00000622329 COLQQ9Y215 455 aaPredicted RBP13.92□□□□□ -0.18
RNU6-538P-201ENST00000622329 POTEMA6NI47 508 aa13.89□□□□□ -0.19
RNU6-538P-201ENST00000622329 SGIP1Q9BQI5 828 aa13.89□□□□□ -0.19
RNU6-538P-201ENST00000622329 IFNL1Q8IU54 200 aa13.87□□□□□ -0.19
RNU6-538P-201ENST00000622329 PCDHB13Q9Y5F0 798 aa13.87□□□□□ -0.19
RNU6-538P-201ENST00000622329 POTEGQ6S5H5 508 aa13.85□□□□□ -0.19
RNU6-538P-201ENST00000622329 MAMSTRQ6ZN01 415 aa13.84□□□□□ -0.19
RNU6-538P-201ENST00000622329 ZBTB47Q9UFB7 747 aaPredicted RBP13.84□□□□□ -0.19
RNU6-538P-201ENST00000622329 TRIM35Q9UPQ4 493 aa13.83□□□□□ -0.2
RNU6-538P-201ENST00000622329 PLSCR2Q9NRY7 297 aa13.82□□□□□ -0.2
RNU6-538P-201ENST00000622329 FAM212AQ96EL1 285 aa13.78□□□□□ -0.2
RNU6-538P-201ENST00000622329 SCUBE2Q9NQ36 999 aa13.77□□□□□ -0.21
RNU6-538P-201ENST00000622329 IER5LQ5T953 404 aa13.76□□□□□ -0.21
RNU6-538P-201ENST00000622329 TMEM106CQ9BVX2 250 aa13.72□□□□□ -0.21
RNU6-538P-201ENST00000622329 SEC24BO95487 1268 aa13.71□□□□□ -0.21
RNU6-538P-201ENST00000622329 PYGBP11216 843 aa13.7□□□□□ -0.22
RNU6-538P-201ENST00000622329 FAM163AQ96GL9 167 aaPredicted RBP13.68□□□□□ -0.22
RNU6-538P-201ENST00000622329 IRX5P78411 483 aaPredicted RBP13.67□□□□□ -0.22
RNU6-538P-201ENST00000622329 DCAF8Q5TAQ9 597 aa13.65□□□□□ -0.22
RNU6-538P-201ENST00000622329 FBXO3Q9UK99 471 aa13.65□□□□□ -0.22
RNU6-538P-201ENST00000622329 PCDHB8Q9UN66 801 aa13.64□□□□□ -0.23
RNU6-538P-201ENST00000622329 VASPP50552 380 aaPredicted RBP13.62□□□□□ -0.23
RNU6-538P-201ENST00000622329 PCDH10Q9P2E7 1040 aa13.58□□□□□ -0.24
RNU6-538P-201ENST00000622329 PLCG2P16885 1265 aa13.54□□□□□ -0.24
RNU6-538P-201ENST00000622329 SLAIN1Q8ND83 568 aa13.53□□□□□ -0.24
RNU6-538P-201ENST00000622329 OCEL1Q9H607 264 aa13.51□□□□□ -0.25
RNU6-538P-201ENST00000622329 ST18O60284 1047 aa13.47□□□□□ -0.25
RNU6-538P-201ENST00000622329 CHRM1P11229 460 aaPredicted RBP13.47□□□□□ -0.25
RNU6-538P-201ENST00000622329 KLHL34Q8N239 644 aa13.47□□□□□ -0.25
RNU6-538P-201ENST00000622329 PDCD7Q8N8D1 485 aaKnown RBP13.47□□□□□ -0.25
RNU6-538P-201ENST00000622329 GSE1Q14687 1217 aa13.46□□□□□ -0.25
RNU6-538P-201ENST00000622329 IFNLR1Q8IU57 520 aaPredicted RBP13.44□□□□□ -0.26
RNU6-538P-201ENST00000622329 ZNF467Q7Z7K2 595 aaPredicted RBP13.41□□□□□ -0.26
RNU6-538P-201ENST00000622329 CDAN1Q8IWY9 1227 aa13.38□□□□□ -0.27
RNU6-538P-201ENST00000622329 ILDR1Q86SU0 546 aaPredicted RBP13.37□□□□□ -0.27
RNU6-538P-201ENST00000622329 PSEN1P49768 467 aa13.36□□□□□ -0.27
RNU6-538P-201ENST00000622329 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.32□□□□□ -0.28
RNU6-538P-201ENST00000622329 SPOCK2Q92563 424 aa13.3□□□□□ -0.28
RNU6-538P-201ENST00000622329 MKRN3Q13064 507 aaKnown RBP13.28□□□□□ -0.28
RNU6-538P-201ENST00000622329 DPY19L2Q6NUT2 758 aa13.28□□□□□ -0.28
RNU6-538P-201ENST00000622329 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.27□□□□□ -0.29
RNU6-538P-201ENST00000622329 PDAP1Q13442 181 aaKnown RBP13.26□□□□□ -0.29
RNU6-538P-201ENST00000622329 TMEM121BQ9BXQ6 578 aaPredicted RBP13.23□□□□□ -0.29
RNU6-538P-201ENST00000622329 GOLGA2Q08379 1002 aa13.22□□□□□ -0.29
RNU6-538P-201ENST00000622329 MARVELD3Q96A59 401 aa13.22□□□□□ -0.29
RNU6-538P-201ENST00000622329 CIZ1Q9ULV3 898 aaPredicted RBP13.22□□□□□ -0.29
RNU6-538P-201ENST00000622329 L3MBTL3Q96JM7 780 aaPredicted RBP13.21□□□□□ -0.29
RNU6-538P-201ENST00000622329 CABP2Q9NPB3 220 aa13.2□□□□□ -0.3
RNU6-538P-201ENST00000622329 SNPHO15079 494 aa13.18□□□□□ -0.3
RNU6-538P-201ENST00000622329 C3orf67Q6ZVT6 689 aa13.18□□□□□ -0.3
RNU6-538P-201ENST00000622329 POTEB3A0JP26 581 aa13.16□□□□□ -0.3
RNU6-538P-201ENST00000622329 POTEBQ6S5H4 581 aa13.16□□□□□ -0.3
RNU6-538P-201ENST00000622329 SPNS2Q8IVW8 549 aa13.1□□□□□ -0.31
RNU6-538P-201ENST00000622329 HOXB3P14651 431 aaPredicted RBP13.09□□□□□ -0.31
RNU6-538P-201ENST00000622329 BOLA1Q9Y3E2 137 aa13.09□□□□□ -0.31
RNU6-538P-201ENST00000622329 RNF25Q96BH1 459 aaPredicted RBP13.08□□□□□ -0.32
RNU6-538P-201ENST00000622329 MMRN1Q13201 1228 aa13.07□□□□□ -0.32
RNU6-538P-201ENST00000622329 EFCAB3Q8N7B9 438 aa13.07□□□□□ -0.32
RNU6-538P-201ENST00000622329 KRTAP3-3Q9BYR6 98 aa13.05□□□□□ -0.32
RNU6-538P-201ENST00000622329 KRTAP3-2Q9BYR7 98 aa13.05□□□□□ -0.32
RNU6-538P-201ENST00000622329 EMP3P54852 163 aa13.04□□□□□ -0.32
RNU6-538P-201ENST00000622329 HS3ST6Q96QI5 342 aa13.02□□□□□ -0.33
RNU6-538P-201ENST00000622329 TRIM41Q8WV44 630 aa13□□□□□ -0.33
RNU6-538P-201ENST00000622329 TMEM92Q6UXU6 159 aa12.99□□□□□ -0.33
RNU6-538P-201ENST00000622329 FAM205CA6NFA0 338 aa12.98□□□□□ -0.33
RNU6-538P-201ENST00000622329 MS4A4AQ96JQ5 239 aa12.98□□□□□ -0.33
RNU6-538P-201ENST00000622329 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.93□□□□□ -0.34
RNU6-538P-201ENST00000622329 ZFP91Q96JP5 570 aaPredicted RBP12.93□□□□□ -0.34
RNU6-538P-201ENST00000622329 RIOK3O14730 519 aaKnown RBP12.92□□□□□ -0.34
RNU6-538P-201ENST00000622329 MICALL2Q8IY33 904 aa12.92□□□□□ -0.34
RNU6-538P-201ENST00000622329 HOXB1P14653 301 aaPredicted RBP12.91□□□□□ -0.34
RNU6-538P-201ENST00000622329 G3V3G9 751 aa12.89□□□□□ -0.35
RNU6-538P-201ENST00000622329 PHF8Q9UPP1 1060 aa12.88□□□□□ -0.35
RNU6-538P-201ENST00000622329 SOX12O15370 315 aa12.86□□□□□ -0.35
RNU6-538P-201ENST00000622329 VGFO15240 615 aaPredicted RBP12.85□□□□□ -0.35
RNU6-538P-201ENST00000622329 DOK7Q18PE1 504 aa12.83□□□□□ -0.36
RNU6-538P-201ENST00000622329 FBXO22Q8NEZ5 403 aa12.81□□□□□ -0.36
RNU6-538P-201ENST00000622329 ZNF710Q8N1W2 664 aa12.8□□□□□ -0.36
RNU6-538P-201ENST00000622329 GPR153Q6NV75 609 aa12.78□□□□□ -0.36
RNU6-538P-201ENST00000622329 ERBB3P21860 1342 aa12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms