RNA–Protein interactions for RNA: ENST00000619259.4

SEM1-220, Transcript of SEM1, 26S proteasome complex subunit, humanhuman

TSL 2

Gene SEM1, Length 462 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEM1-220ENST00000619259 TSPYL2Q9H2G4 693 aaPredicted RBP10.2□□□□□ -0.78
SEM1-220ENST00000619259 CHGAP10645 457 aaKnown RBP10.18□□□□□ -0.78
SEM1-220ENST00000619259 PLCB2Q00722 1185 aa10.17□□□□□ -0.78
SEM1-220ENST00000619259 PIP4P2Q8N4L2 257 aa10.17□□□□□ -0.78
SEM1-220ENST00000619259 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.17□□□□□ -0.78
SEM1-220ENST00000619259 PYGBP11216 843 aa10.16□□□□□ -0.78
SEM1-220ENST00000619259 BBXQ8WY36 941 aaPredicted RBP10.14□□□□□ -0.79
SEM1-220ENST00000619259 RIOK3O14730 519 aaKnown RBP10.13□□□□□ -0.79
SEM1-220ENST00000619259 RNF25Q96BH1 459 aaPredicted RBP10.13□□□□□ -0.79
SEM1-220ENST00000619259 TAOK2Q9UL54 1235 aa10.13□□□□□ -0.79
SEM1-220ENST00000619259 HAP1P54257 671 aaPredicted RBP10.12□□□□□ -0.79
SEM1-220ENST00000619259 PAK3O75914 559 aaPredicted RBP10.11□□□□□ -0.79
SEM1-220ENST00000619259 CHRM1P11229 460 aaPredicted RBP10.1□□□□□ -0.79
SEM1-220ENST00000619259 CFAP44Q96MT7 982 aa10.1□□□□□ -0.79
SEM1-220ENST00000619259 PAXIP1Q6ZW49 1069 aaPredicted RBP10.09□□□□□ -0.79
SEM1-220ENST00000619259 VGFO15240 615 aaPredicted RBP10.06□□□□□ -0.8
SEM1-220ENST00000619259 STK25O00506 426 aa10.05□□□□□ -0.8
SEM1-220ENST00000619259 HS6ST3Q8IZP7 471 aa10.04□□□□□ -0.8
SEM1-220ENST00000619259 SPRYD3Q8NCJ5 442 aa10.03□□□□□ -0.8
SEM1-220ENST00000619259 STK24Q9Y6E0 443 aa10.01□□□□□ -0.81
SEM1-220ENST00000619259 CCDC61Q9Y6R9 512 aa10.01□□□□□ -0.81
SEM1-220ENST00000619259 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP10□□□□□ -0.81
SEM1-220ENST00000619259 ZNF467Q7Z7K2 595 aaPredicted RBP10□□□□□ -0.81
SEM1-220ENST00000619259 ZFP91Q96JP5 570 aaPredicted RBP10□□□□□ -0.81
SEM1-220ENST00000619259 ZRANB1Q9UGI0 708 aa10□□□□□ -0.81
SEM1-220ENST00000619259 CD44P16070 742 aaKnown RBP9.99□□□□□ -0.81
SEM1-220ENST00000619259 PCDHB8Q9UN66 801 aa9.99□□□□□ -0.81
SEM1-220ENST00000619259 PCDHB13Q9Y5F0 798 aa9.99□□□□□ -0.81
SEM1-220ENST00000619259 BCL11BQ9C0K0 894 aaPredicted RBP9.98□□□□□ -0.81
SEM1-220ENST00000619259 SGIP1Q9BQI5 828 aa9.94□□□□□ -0.82
SEM1-220ENST00000619259 MAP3K13O43283 966 aa9.93□□□□□ -0.82
SEM1-220ENST00000619259 PDAP1Q13442 181 aaKnown RBP9.93□□□□□ -0.82
SEM1-220ENST00000619259 ZNF579Q8NAF0 562 aaKnown RBP9.92□□□□□ -0.82
SEM1-220ENST00000619259 KIF12Q96FN5 646 aa9.91□□□□□ -0.82
SEM1-220ENST00000619259 PSEN1P49768 467 aa9.9□□□□□ -0.82
SEM1-220ENST00000619259 IFNL1Q8IU54 200 aa9.9□□□□□ -0.82
SEM1-220ENST00000619259 PHF12Q96QT6 1004 aa9.9□□□□□ -0.82
SEM1-220ENST00000619259 NKX1-1Q15270 411 aaPredicted RBP9.89□□□□□ -0.83
SEM1-220ENST00000619259 DNAJC5Q9H3Z4 198 aa9.89□□□□□ -0.83
SEM1-220ENST00000619259 VSIG10Q8N0Z9 540 aa9.87□□□□□ -0.83
SEM1-220ENST00000619259 TSHZ2Q9NRE2 1034 aa9.87□□□□□ -0.83
SEM1-220ENST00000619259 C19orf67A6NJJ6 358 aa9.86□□□□□ -0.83
SEM1-220ENST00000619259 HAX1O00165 279 aa9.85□□□□□ -0.83
SEM1-220ENST00000619259 GTPBP6O43824 516 aaPredicted RBP9.84□□□□□ -0.83
SEM1-220ENST00000619259 RYDENQ9NUL5 291 aaKnown RBP9.83□□□□□ -0.84
SEM1-220ENST00000619259 CABP2Q9NPB3 220 aa9.8□□□□□ -0.84
SEM1-220ENST00000619259 KDM2AQ9Y2K7 1162 aa9.79□□□□□ -0.84
SEM1-220ENST00000619259 MS4A3Q96HJ5 214 aa9.78□□□□□ -0.84
SEM1-220ENST00000619259 GOLGA2Q08379 1002 aa9.77□□□□□ -0.85
SEM1-220ENST00000619259 EFCAB3Q8N7B9 438 aa9.75□□□□□ -0.85
SEM1-220ENST00000619259 TMEM106CQ9BVX2 250 aa9.75□□□□□ -0.85
SEM1-220ENST00000619259 TRPC6Q9Y210 931 aa9.73□□□□□ -0.85
SEM1-220ENST00000619259 MFRPQ9BY79 579 aa9.71□□□□□ -0.86
SEM1-220ENST00000619259 SOX12O15370 315 aa9.7□□□□□ -0.86
SEM1-220ENST00000619259 NLRP6P59044 892 aa9.7□□□□□ -0.86
SEM1-220ENST00000619259 EVX2Q03828 476 aa9.7□□□□□ -0.86
SEM1-220ENST00000619259 PHF8Q9UPP1 1060 aa9.69□□□□□ -0.86
SEM1-220ENST00000619259 GALR2O43603 387 aaPredicted RBP9.68□□□□□ -0.86
SEM1-220ENST00000619259 MKRN3Q13064 507 aaKnown RBP9.68□□□□□ -0.86
SEM1-220ENST00000619259 TIE1P35590 1138 aa9.66□□□□□ -0.86
SEM1-220ENST00000619259 BCANQ96GW7 911 aa9.66□□□□□ -0.86
SEM1-220ENST00000619259 TTLL13PA6NNM8 815 aa9.64□□□□□ -0.87
SEM1-220ENST00000619259 CLCN6P51797 869 aa9.64□□□□□ -0.87
SEM1-220ENST00000619259 BMP2KQ9NSY1 1161 aaPredicted RBP9.63□□□□□ -0.87
SEM1-220ENST00000619259 PPP1R37O75864 691 aa9.62□□□□□ -0.87
SEM1-220ENST00000619259 POTEHQ6S545 545 aa9.62□□□□□ -0.87
SEM1-220ENST00000619259 FBXO22Q8NEZ5 403 aa9.62□□□□□ -0.87
SEM1-220ENST00000619259 TRIM35Q9UPQ4 493 aa9.6□□□□□ -0.87
SEM1-220ENST00000619259 WDR70Q9NW82 654 aa9.59□□□□□ -0.87
SEM1-220ENST00000619259 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP9.59□□□□□ -0.875e-8■□□□□ 10.5
SEM1-220ENST00000619259 CADPS2Q86UW7 1296 aa9.58□□□□□ -0.88
SEM1-220ENST00000619259 MS4A4AQ96JQ5 239 aa9.56□□□□□ -0.88
SEM1-220ENST00000619259 GABBR2O75899 941 aa9.55□□□□□ -0.88
SEM1-220ENST00000619259 ATN1P54259 1190 aaPredicted RBP9.55□□□□□ -0.88
SEM1-220ENST00000619259 NBR1Q14596 966 aa9.54□□□□□ -0.88
SEM1-220ENST00000619259 ATMINO43313 823 aaPredicted RBP9.52□□□□□ -0.89
SEM1-220ENST00000619259 DCBLD2Q96PD2 775 aa9.52□□□□□ -0.89
SEM1-220ENST00000619259 ASTLQ6HA08 431 aaPredicted RBP9.49□□□□□ -0.89
SEM1-220ENST00000619259 DPY19L2Q6NUT2 758 aa9.47□□□□□ -0.89
SEM1-220ENST00000619259 P3H3Q8IVL6 736 aa9.47□□□□□ -0.89
SEM1-220ENST00000619259 G3V3G9 751 aa9.46□□□□□ -0.9
SEM1-220ENST00000619259 PDE4AP27815 886 aa9.46□□□□□ -0.9
SEM1-220ENST00000619259 LARP6Q9BRS8 491 aaKnown RBP9.46□□□□□ -0.9
SEM1-220ENST00000619259 OCEL1Q9H607 264 aa9.45□□□□□ -0.9
SEM1-220ENST00000619259 SEC24BO95487 1268 aa9.44□□□□□ -0.9
SEM1-220ENST00000619259 PLCG2P16885 1265 aa9.44□□□□□ -0.9
SEM1-220ENST00000619259 IER5LQ5T953 404 aa9.44□□□□□ -0.9
SEM1-220ENST00000619259 ILDR1Q86SU0 546 aaPredicted RBP9.43□□□□□ -0.9
SEM1-220ENST00000619259 IRX5P78411 483 aaPredicted RBP9.42□□□□□ -0.9
SEM1-220ENST00000619259 NCKAP5LQ9HCH0 1330 aa9.41□□□□□ -0.9
SEM1-220ENST00000619259 PDCD7Q8N8D1 485 aaKnown RBP9.41□□□□□ -0.9
SEM1-220ENST00000619259 KCNV2Q8TDN2 545 aa9.41□□□□□ -0.9
SEM1-220ENST00000619259 E2F4Q16254 413 aa9.4□□□□□ -0.9
SEM1-220ENST00000619259 PELP1Q8IZL8 1130 aaKnown RBP9.4□□□□□ -0.9
SEM1-220ENST00000619259 DDX27Q96GQ7 796 aaKnown RBP9.4□□□□□ -0.9
SEM1-220ENST00000619259 MICALL2Q8IY33 904 aa9.39□□□□□ -0.91
SEM1-220ENST00000619259 SP7Q8TDD2 431 aaPredicted RBP9.39□□□□□ -0.91
SEM1-220ENST00000619259 CRISPLD2Q9H0B8 497 aa9.38□□□□□ -0.91
SEM1-220ENST00000619259 BOLA1Q9Y3E2 137 aa9.38□□□□□ -0.91
SEM1-220ENST00000619259 SLC39A7Q92504 469 aa9.37□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms