RNA–Protein interactions for RNA: ENST00000619060.1

PHLDA1-203, Transcript of pleckstrin homology like domain family A member 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PHLDA1, Length 5,913 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHLDA1-203ENST00000619060 TSPY10P0CW01 314 aa20.1■□□□□ 0.81
PHLDA1-203ENST00000619060 CLIP1P30622 1438 aa20.08■□□□□ 0.8
PHLDA1-203ENST00000619060 DDRGK1Q96HY6 314 aa20.08■□□□□ 0.8
PHLDA1-203ENST00000619060 ANP32EQ9BTT0 268 aa20.08■□□□□ 0.8
PHLDA1-203ENST00000619060 RTN4Q9NQC3 1192 aaKnown RBP20.08■□□□□ 0.8
PHLDA1-203ENST00000619060 NPM1P06748 294 aaKnown RBP eCLIP20.07■□□□□ 0.8
PHLDA1-203ENST00000619060 SUPT16HQ9Y5B9 1047 aaKnown RBP20.05■□□□□ 0.8
PHLDA1-203ENST00000619060 BECN1Q14457 450 aa20.04■□□□□ 0.8
PHLDA1-203ENST00000619060 PLEKHG5O94827 1062 aa20.03■□□□□ 0.8
PHLDA1-203ENST00000619060 TRIM44Q96DX7 344 aaPredicted RBP20.03■□□□□ 0.8
PHLDA1-203ENST00000619060 ZBTB7CA1YPR0 619 aa20.03■□□□□ 0.8
PHLDA1-203ENST00000619060 ZCCHC6Q5VYS8 1495 aaKnown RBP20.01■□□□□ 0.79
PHLDA1-203ENST00000619060 TNNT2P45379 298 aaPredicted RBP19.99■□□□□ 0.79
PHLDA1-203ENST00000619060 NCLP19338 710 aaKnown RBP19.98■□□□□ 0.79
PHLDA1-203ENST00000619060 RGL3Q3MIN7 710 aa19.97■□□□□ 0.79
PHLDA1-203ENST00000619060 TPRNQ4KMQ1 711 aa19.97■□□□□ 0.79
PHLDA1-203ENST00000619060 A0A0G2JS52 829 aa19.95■□□□□ 0.78
PHLDA1-203ENST00000619060 LAS1LQ9Y4W2 734 aaKnown RBP19.94■□□□□ 0.78
PHLDA1-203ENST00000619060 CEP162Q5TB80 1403 aa19.94■□□□□ 0.78
PHLDA1-203ENST00000619060 C14orf37Q86TY3 774 aa19.91■□□□□ 0.78
PHLDA1-203ENST00000619060 NAP1L5Q96NT1 182 aaPredicted RBP19.91■□□□□ 0.78
PHLDA1-203ENST00000619060 GOLGA6L22H0YM25 854 aa19.9■□□□□ 0.78
PHLDA1-203ENST00000619060 CHMP7Q8WUX9 453 aaPredicted RBP19.89■□□□□ 0.77
PHLDA1-203ENST00000619060 KCNH8Q96L42 1107 aa19.87■□□□□ 0.77
PHLDA1-203ENST00000619060 GOLGA3Q08378 1498 aa19.87■□□□□ 0.77
PHLDA1-203ENST00000619060 NEUROD2Q15784 382 aa19.86■□□□□ 0.77
PHLDA1-203ENST00000619060 PTMAP06454 111 aaKnown RBP19.85■□□□□ 0.77
PHLDA1-203ENST00000619060 CCDC180Q9P1Z9 1646 aa19.84■□□□□ 0.77
PHLDA1-203ENST00000619060 PPM1GO15355 546 aaPredicted RBP19.84■□□□□ 0.77
PHLDA1-203ENST00000619060 SIN3AQ96ST3 1273 aa19.84■□□□□ 0.77
PHLDA1-203ENST00000619060 KNSTRNQ9Y448 316 aa19.84■□□□□ 0.77
PHLDA1-203ENST00000619060 FTSJ3Q8IY81 847 aaKnown RBP19.84■□□□□ 0.77
PHLDA1-203ENST00000619060 CDK11BP21127 795 aaKnown RBP19.84■□□□□ 0.77
PHLDA1-203ENST00000619060 ERICH6BQ5W0A0 696 aa19.83■□□□□ 0.77
PHLDA1-203ENST00000619060 RGS3P49796 1198 aa19.83■□□□□ 0.76
PHLDA1-203ENST00000619060 DNTTIP2Q5QJE6 756 aaKnown RBP19.83■□□□□ 0.76
PHLDA1-203ENST00000619060 CARD11Q9BXL7 1154 aa19.83■□□□□ 0.76
PHLDA1-203ENST00000619060 PPP1R15AO75807 674 aaPredicted RBP19.82■□□□□ 0.76
PHLDA1-203ENST00000619060 PPP4R2Q9NY27 417 aa19.81■□□□□ 0.76
PHLDA1-203ENST00000619060 CFAP53Q96M91 514 aa19.81■□□□□ 0.76
PHLDA1-203ENST00000619060 RSF1Q96T23 1441 aaPredicted RBP19.8■□□□□ 0.76
PHLDA1-203ENST00000619060 NOP58Q9Y2X3 529 aaKnown RBP19.8■□□□□ 0.76
PHLDA1-203ENST00000619060 CASC1Q6TDU7 716 aa19.78■□□□□ 0.76
PHLDA1-203ENST00000619060 B4GALNT3Q6L9W6 998 aa19.77■□□□□ 0.76
PHLDA1-203ENST00000619060 FRAT1Q92837 279 aaPredicted RBP19.77■□□□□ 0.75
PHLDA1-203ENST00000619060 CC2D1BQ5T0F9 858 aaKnown RBP19.76■□□□□ 0.75
PHLDA1-203ENST00000619060 AMER1Q5JTC6 1135 aaPredicted RBP19.75■□□□□ 0.75
PHLDA1-203ENST00000619060 PLEKHD1A6NEE1 506 aa19.74■□□□□ 0.75
PHLDA1-203ENST00000619060 ZRSR1Q15695 479 aaKnown RBP19.72■□□□□ 0.75
PHLDA1-203ENST00000619060 TAOK2Q9UL54 1235 aa19.7■□□□□ 0.74
PHLDA1-203ENST00000619060 CDCA8Q53HL2 280 aa19.7■□□□□ 0.74
PHLDA1-203ENST00000619060 CFDP1Q9UEE9 299 aaPredicted RBP19.7■□□□□ 0.74
PHLDA1-203ENST00000619060 PLCB2Q00722 1185 aa19.69■□□□□ 0.74
PHLDA1-203ENST00000619060 MAPK8IP3Q9UPT6 1336 aa19.69■□□□□ 0.74
PHLDA1-203ENST00000619060 EEA1Q15075 1411 aa19.67■□□□□ 0.74
PHLDA1-203ENST00000619060 HSP90AB1P08238 724 aaKnown RBP19.67■□□□□ 0.74
PHLDA1-203ENST00000619060 TNIKQ9UKE5 1360 aa19.64■□□□□ 0.73
PHLDA1-203ENST00000619060 TULP1O00294 542 aaPredicted RBP19.63■□□□□ 0.73
PHLDA1-203ENST00000619060 WRNQ14191 1432 aaPredicted RBP eCLIP19.63■□□□□ 0.73
PHLDA1-203ENST00000619060 SPRYD3Q8NCJ5 442 aa19.62■□□□□ 0.73
PHLDA1-203ENST00000619060 ARID4BQ4LE39 1312 aaPredicted RBP19.6■□□□□ 0.73
PHLDA1-203ENST00000619060 DEKP35659 375 aaKnown RBP19.6■□□□□ 0.73
PHLDA1-203ENST00000619060 U2SURPO15042 1029 aaKnown RBP19.6■□□□□ 0.73
PHLDA1-203ENST00000619060 NUDCQ9Y266 331 aa19.6■□□□□ 0.73
PHLDA1-203ENST00000619060 CEP164Q9UPV0 1460 aa19.58■□□□□ 0.73
PHLDA1-203ENST00000619060 HAP1P54257 671 aaPredicted RBP19.57■□□□□ 0.72
PHLDA1-203ENST00000619060 POGKQ9P215 609 aa19.56■□□□□ 0.72
PHLDA1-203ENST00000619060 OS9Q13438 667 aaPredicted RBP19.55■□□□□ 0.72
PHLDA1-203ENST00000619060 RBM19Q9Y4C8 960 aaKnown RBP19.55■□□□□ 0.72
PHLDA1-203ENST00000619060 KIF27Q86VH2 1401 aa19.54■□□□□ 0.72
PHLDA1-203ENST00000619060 DCAF11Q8TEB1 546 aa19.52■□□□□ 0.72
PHLDA1-203ENST00000619060 HSCBQ8IWL3 235 aa19.52■□□□□ 0.72
PHLDA1-203ENST00000619060 NAP1L2Q9ULW6 460 aaPredicted RBP19.52■□□□□ 0.72
PHLDA1-203ENST00000619060 LMOD2Q6P5Q4 547 aa19.5■□□□□ 0.71
PHLDA1-203ENST00000619060 ZBTB4Q9P1Z0 1013 aaPredicted RBP19.5■□□□□ 0.71
PHLDA1-203ENST00000619060 FGD1P98174 961 aa19.49■□□□□ 0.71
PHLDA1-203ENST00000619060 CCNB3Q8WWL7 1395 aa19.49■□□□□ 0.71
PHLDA1-203ENST00000619060 KCNJ4P48050 445 aa19.48■□□□□ 0.71
PHLDA1-203ENST00000619060 TMF1P82094 1093 aa19.48■□□□□ 0.71
PHLDA1-203ENST00000619060 HSPA5P11021 654 aaKnown RBP19.47■□□□□ 0.71
PHLDA1-203ENST00000619060 MS4A1P11836 297 aa19.46■□□□□ 0.71
PHLDA1-203ENST00000619060 GOLGA6L6A8MZA4 724 aa19.45■□□□□ 0.7
PHLDA1-203ENST00000619060 CHMP4BQ9H444 224 aaKnown RBP19.45■□□□□ 0.7
PHLDA1-203ENST00000619060 BAZ1BQ9UIG0 1483 aaKnown RBP19.44■□□□□ 0.7
PHLDA1-203ENST00000619060 CCER2I3L3R5 266 aa19.43■□□□□ 0.7
PHLDA1-203ENST00000619060 ARID3AQ99856 593 aa19.43■□□□□ 0.7
PHLDA1-203ENST00000619060 SOX12O15370 315 aa19.42■□□□□ 0.7
PHLDA1-203ENST00000619060 MSNP26038 577 aaKnown RBP19.41■□□□□ 0.7
PHLDA1-203ENST00000619060 L1TD1Q5T7N2 865 aaKnown RBP19.41■□□□□ 0.7
PHLDA1-203ENST00000619060 FOXD1Q16676 465 aa19.4■□□□□ 0.7
PHLDA1-203ENST00000619060 GOLGA6L4A6NEF3 574 aa19.4■□□□□ 0.7
PHLDA1-203ENST00000619060 SAFB2Q14151 953 aaKnown RBP eCLIP19.4■□□□□ 0.7
PHLDA1-203ENST00000619060 MORC1Q86VD1 984 aa19.39■□□□□ 0.69
PHLDA1-203ENST00000619060 PNNQ9H307 717 aaKnown RBP19.39■□□□□ 0.69
PHLDA1-203ENST00000619060 RB1CC1Q8TDY2 1594 aa19.39■□□□□ 0.69
PHLDA1-203ENST00000619060 APBB1O00213 710 aa19.38■□□□□ 0.69
PHLDA1-203ENST00000619060 EIF4G1Q04637 1599 aaKnown RBP19.37■□□□□ 0.69
PHLDA1-203ENST00000619060 SRPK2P78362 688 aaKnown RBP19.36■□□□□ 0.69
PHLDA1-203ENST00000619060 DRC7Q8IY82 874 aa19.36■□□□□ 0.69
PHLDA1-203ENST00000619060 CHAF1AQ13111 956 aaPredicted RBP19.35■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms