RNA–Protein interactions for RNA: ENST00000617806.4

BECN1-222, Transcript of beclin 1, humanhuman

TSL 5

Gene BECN1, Length 4,865 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BECN1-222ENST00000617806 KDM2AQ9Y2K7 1162 aa14.95□□□□□ -0.02
BECN1-222ENST00000617806 ANP32BQ92688 251 aaKnown RBP14.94□□□□□ -0.02
BECN1-222ENST00000617806 WRNQ14191 1432 aaPredicted RBP eCLIP14.94□□□□□ -0.02
BECN1-222ENST00000617806 B4GALNT3Q6L9W6 998 aa14.93□□□□□ -0.02
BECN1-222ENST00000617806 RB1CC1Q8TDY2 1594 aa14.93□□□□□ -0.02
BECN1-222ENST00000617806 GOLGA6L2Q8N9W4 650 aaPredicted RBP14.93□□□□□ -0.02
BECN1-222ENST00000617806 RTN4Q9NQC3 1192 aaKnown RBP14.93□□□□□ -0.02
BECN1-222ENST00000617806 NOP58Q9Y2X3 529 aaKnown RBP14.92□□□□□ -0.02
BECN1-222ENST00000617806 CEP164Q9UPV0 1460 aa14.92□□□□□ -0.02
BECN1-222ENST00000617806 NEFMP07197 916 aa14.91□□□□□ -0.02
BECN1-222ENST00000617806 SOGA1O94964 1423 aa14.89□□□□□ -0.03
BECN1-222ENST00000617806 WDR43Q15061 677 aaKnown RBP eCLIP14.89□□□□□ -0.03
BECN1-222ENST00000617806 LAS1LQ9Y4W2 734 aaKnown RBP14.89□□□□□ -0.03
BECN1-222ENST00000617806 DDRGK1Q96HY6 314 aa14.88□□□□□ -0.03
BECN1-222ENST00000617806 DEKP35659 375 aaKnown RBP14.86□□□□□ -0.03
BECN1-222ENST00000617806 CCNB3Q8WWL7 1395 aa14.83□□□□□ -0.03
BECN1-222ENST00000617806 CCER2I3L3R5 266 aa14.83□□□□□ -0.04
BECN1-222ENST00000617806 SLC24A1O60721 1099 aa14.83□□□□□ -0.04
BECN1-222ENST00000617806 PPM1GO15355 546 aaPredicted RBP14.83□□□□□ -0.04
BECN1-222ENST00000617806 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.82□□□□□ -0.041e-6■□□□□ 11.3
BECN1-222ENST00000617806 CECR2Q9BXF3 1484 aa14.82□□□□□ -0.04
BECN1-222ENST00000617806 CHGAP10645 457 aaKnown RBP14.77□□□□□ -0.05
BECN1-222ENST00000617806 TSPY4P0CV99 314 aa14.76□□□□□ -0.05
BECN1-222ENST00000617806 TSPY10P0CW01 314 aa14.76□□□□□ -0.05
BECN1-222ENST00000617806 BECN1Q14457 450 aa14.76□□□□□ -0.05
BECN1-222ENST00000617806 VPS8Q8N3P4 1428 aa14.76□□□□□ -0.05
BECN1-222ENST00000617806 KANK4Q5T7N3 995 aaPredicted RBP14.76□□□□□ -0.05
BECN1-222ENST00000617806 TIMELESSQ9UNS1 1208 aa14.74□□□□□ -0.05
BECN1-222ENST00000617806 KCNH8Q96L42 1107 aa14.73□□□□□ -0.05
BECN1-222ENST00000617806 KIF27Q86VH2 1401 aa14.73□□□□□ -0.05
BECN1-222ENST00000617806 CCDC88BA6NC98 1476 aa14.72□□□□□ -0.05
BECN1-222ENST00000617806 RGS3P49796 1198 aa14.71□□□□□ -0.05
BECN1-222ENST00000617806 ERICH6BQ5W0A0 696 aa14.71□□□□□ -0.06
BECN1-222ENST00000617806 CARD11Q9BXL7 1154 aa14.71□□□□□ -0.06
BECN1-222ENST00000617806 ABCC8Q09428 1581 aa14.7□□□□□ -0.06
BECN1-222ENST00000617806 RGL3Q3MIN7 710 aa14.7□□□□□ -0.06
BECN1-222ENST00000617806 TRIM44Q96DX7 344 aaPredicted RBP14.7□□□□□ -0.06
BECN1-222ENST00000617806 SETD5Q9C0A6 1442 aa14.69□□□□□ -0.06
BECN1-222ENST00000617806 HSPA5P11021 654 aaKnown RBP14.67□□□□□ -0.06
BECN1-222ENST00000617806 RAB3GAP2Q9H2M9 1393 aa14.67□□□□□ -0.06
BECN1-222ENST00000617806 BAZ1AQ9NRL2 1556 aaPredicted RBP14.65□□□□□ -0.06
BECN1-222ENST00000617806 MROH2BQ7Z745 1585 aa14.63□□□□□ -0.07
BECN1-222ENST00000617806 NAP1L5Q96NT1 182 aaPredicted RBP14.62□□□□□ -0.07
BECN1-222ENST00000617806 PPP1R15AO75807 674 aaPredicted RBP14.61□□□□□ -0.07
BECN1-222ENST00000617806 KNSTRNQ9Y448 316 aa14.61□□□□□ -0.07
BECN1-222ENST00000617806 BAZ1BQ9UIG0 1483 aaKnown RBP14.61□□□□□ -0.07
BECN1-222ENST00000617806 CC2D1BQ5T0F9 858 aaKnown RBP14.59□□□□□ -0.07
BECN1-222ENST00000617806 DHX57Q6P158 1386 aaKnown RBP14.58□□□□□ -0.08
BECN1-222ENST00000617806 NEUROD2Q15784 382 aa14.58□□□□□ -0.08
BECN1-222ENST00000617806 CFDP1Q9UEE9 299 aaPredicted RBP14.58□□□□□ -0.08
BECN1-222ENST00000617806 NACADO15069 1562 aa14.58□□□□□ -0.08
BECN1-222ENST00000617806 GOLGA6L22H0YM25 854 aa14.57□□□□□ -0.08
BECN1-222ENST00000617806 FHAD1B1AJZ9 1412 aa14.57□□□□□ -0.08
BECN1-222ENST00000617806 NCLP19338 710 aaKnown RBP14.56□□□□□ -0.08
BECN1-222ENST00000617806 FRAT1Q92837 279 aaPredicted RBP14.56□□□□□ -0.08
BECN1-222ENST00000617806 IPO9Q96P70 1041 aaKnown RBP14.56□□□□□ -0.08
BECN1-222ENST00000617806 MYH16Q9H6N6 1097 aa14.56□□□□□ -0.08
BECN1-222ENST00000617806 FOXD1Q16676 465 aa14.55□□□□□ -0.08
BECN1-222ENST00000617806 ZBTB4Q9P1Z0 1013 aaPredicted RBP14.54□□□□□ -0.08
BECN1-222ENST00000617806 FTSJ3Q8IY81 847 aaKnown RBP14.52□□□□□ -0.08
BECN1-222ENST00000617806 STAG3Q9UJ98 1225 aa14.52□□□□□ -0.09
BECN1-222ENST00000617806 CARMIL1Q5VZK9 1371 aa14.51□□□□□ -0.09
BECN1-222ENST00000617806 PLEKHD1A6NEE1 506 aa14.51□□□□□ -0.09
BECN1-222ENST00000617806 RCAN3Q9UKA8 241 aa14.5□□□□□ -0.09
BECN1-222ENST00000617806 TCERG1O14776 1098 aaKnown RBP14.5□□□□□ -0.09
BECN1-222ENST00000617806 CDCA8Q53HL2 280 aa14.5□□□□□ -0.09
BECN1-222ENST00000617806 DCAF11Q8TEB1 546 aa14.5□□□□□ -0.09
BECN1-222ENST00000617806 CHMP7Q8WUX9 453 aaPredicted RBP14.49□□□□□ -0.09
BECN1-222ENST00000617806 SENP3Q9H4L4 574 aaPredicted RBP14.49□□□□□ -0.09
BECN1-222ENST00000617806 ARHGAP35Q9NRY4 1499 aa14.49□□□□□ -0.09
BECN1-222ENST00000617806 NUDCQ9Y266 331 aa14.49□□□□□ -0.09
BECN1-222ENST00000617806 SPRYD3Q8NCJ5 442 aa14.47□□□□□ -0.09
BECN1-222ENST00000617806 CUX2O14529 1486 aa14.47□□□□□ -0.09
BECN1-222ENST00000617806 CFAP53Q96M91 514 aa14.47□□□□□ -0.09
BECN1-222ENST00000617806 PTMAP06454 111 aaKnown RBP14.46□□□□□ -0.09
BECN1-222ENST00000617806 RUSC2Q8N2Y8 1516 aa14.45□□□□□ -0.1
BECN1-222ENST00000617806 FANCIQ9NVI1 1328 aa14.45□□□□□ -0.1
BECN1-222ENST00000617806 TNNT2P45379 298 aaPredicted RBP14.45□□□□□ -0.1
BECN1-222ENST00000617806 L1TD1Q5T7N2 865 aaKnown RBP14.44□□□□□ -0.1
BECN1-222ENST00000617806 DNTTIP2Q5QJE6 756 aaKnown RBP14.44□□□□□ -0.1
BECN1-222ENST00000617806 MPHOSPH9Q99550 1183 aa14.44□□□□□ -0.1
BECN1-222ENST00000617806 WIZO95785 1651 aa14.44□□□□□ -0.1
BECN1-222ENST00000617806 RAPGEF2Q9Y4G8 1499 aa14.43□□□□□ -0.1
BECN1-222ENST00000617806 L3MBTL2Q969R5 705 aa14.43□□□□□ -0.1
BECN1-222ENST00000617806 TPRNQ4KMQ1 711 aa14.42□□□□□ -0.1
BECN1-222ENST00000617806 SLKQ9H2G2 1235 aaPredicted RBP14.42□□□□□ -0.1
BECN1-222ENST00000617806 HSP90AB1P08238 724 aaKnown RBP14.42□□□□□ -0.1
BECN1-222ENST00000617806 TMF1P82094 1093 aa14.41□□□□□ -0.1
BECN1-222ENST00000617806 ARID4BQ4LE39 1312 aaPredicted RBP14.4□□□□□ -0.1
BECN1-222ENST00000617806 PKD2Q13563 968 aa14.4□□□□□ -0.11
BECN1-222ENST00000617806 KTN1Q86UP2 1357 aaKnown RBP14.39□□□□□ -0.11
BECN1-222ENST00000617806 GZF1Q9H116 711 aaPredicted RBP14.39□□□□□ -0.11
BECN1-222ENST00000617806 HSCBQ8IWL3 235 aa14.38□□□□□ -0.11
BECN1-222ENST00000617806 RALBP1Q15311 655 aa14.37□□□□□ -0.11
BECN1-222ENST00000617806 PRKRIP1Q9H875 184 aaPredicted RBP14.36□□□□□ -0.11
BECN1-222ENST00000617806 MAPK8IP3Q9UPT6 1336 aa14.36□□□□□ -0.11
BECN1-222ENST00000617806 ESF1Q9H501 851 aaKnown RBP14.36□□□□□ -0.11
BECN1-222ENST00000617806 FMN1Q68DA7 1419 aa14.35□□□□□ -0.11
BECN1-222ENST00000617806 CASC1Q6TDU7 716 aa14.35□□□□□ -0.11
BECN1-222ENST00000617806 PDE4AP27815 886 aa14.34□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms