RNA–Protein interactions for RNA: ENST00000617246.4

LPP-220, Transcript of LIM domain containing preferred translocation partner in lipoma, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LPP, Length 18,220 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPP-220ENST00000617246 TEX14Q8IWB6 1497 aa4.7□□□□□ -1.66
LPP-220ENST00000617246 CHGAP10645 457 aaKnown RBP4.69□□□□□ -1.66
LPP-220ENST00000617246 CHD1O14646 1710 aa4.69□□□□□ -1.66
LPP-220ENST00000617246 TOP2BQ02880 1626 aa4.67□□□□□ -1.66
LPP-220ENST00000617246 TOP2AP11388 1531 aaKnown RBP4.66□□□□□ -1.66
LPP-220ENST00000617246 CCDC9Q9Y3X0 531 aaKnown RBP4.66□□□□□ -1.66
LPP-220ENST00000617246 KIF21BO75037 1637 aa4.66□□□□□ -1.66
LPP-220ENST00000617246 KDM6BO15054 1643 aa4.66□□□□□ -1.66
LPP-220ENST00000617246 OSCARQ8IYS5 282 aa4.66□□□□□ -1.66
LPP-220ENST00000617246 ZNF777Q9ULD5 760 aaPredicted RBP4.66□□□□□ -1.66
LPP-220ENST00000617246 HECW1Q76N89 1606 aa4.65□□□□□ -1.66
LPP-220ENST00000617246 GOLGA2Q08379 1002 aa4.64□□□□□ -1.67
LPP-220ENST00000617246 POLR3GLQ9BT43 218 aa4.64□□□□□ -1.67
LPP-220ENST00000617246 EEA1Q15075 1411 aa4.64□□□□□ -1.67
LPP-220ENST00000617246 DNMBPQ6XZF7 1577 aa4.63□□□□□ -1.67
LPP-220ENST00000617246 CCDC18Q5T9S5 1454 aa4.63□□□□□ -1.67
LPP-220ENST00000617246 KIF14Q15058 1648 aa4.63□□□□□ -1.67
LPP-220ENST00000617246 ZBTB7CA1YPR0 619 aa4.63□□□□□ -1.67
LPP-220ENST00000617246 MYO5CQ9NQX4 1742 aa4.63□□□□□ -1.67
LPP-220ENST00000617246 TSPY4P0CV99 314 aa4.63□□□□□ -1.67
LPP-220ENST00000617246 TSPY10P0CW01 314 aa4.63□□□□□ -1.67
LPP-220ENST00000617246 ZNF326Q5BKZ1 582 aaKnown RBP4.63□□□□□ -1.67
LPP-220ENST00000617246 TRIM52Q96A61 297 aa4.63□□□□□ -1.67
LPP-220ENST00000617246 DMRT2Q9Y5R5 561 aa4.63□□□□□ -1.67
LPP-220ENST00000617246 SETD1AO15047 1707 aaKnown RBP4.63□□□□□ -1.67
LPP-220ENST00000617246 IFT140Q96RY7 1462 aa4.62□□□□□ -1.67
LPP-220ENST00000617246 EID1Q9Y6B2 187 aa4.62□□□□□ -1.67
LPP-220ENST00000617246 FANCAO15360 1455 aa4.62□□□□□ -1.67
LPP-220ENST00000617246 MAP3K9P80192 1104 aa4.62□□□□□ -1.67
LPP-220ENST00000617246 WIZO95785 1651 aa4.62□□□□□ -1.67
LPP-220ENST00000617246 KIF27Q86VH2 1401 aa4.62□□□□□ -1.67
LPP-220ENST00000617246 MTUS2Q5JR59 1369 aa4.61□□□□□ -1.67
LPP-220ENST00000617246 PPP1R1BQ9UD71 204 aaPredicted RBP4.61□□□□□ -1.67
LPP-220ENST00000617246 FAM50AQ14320 339 aaKnown RBP4.6□□□□□ -1.67
LPP-220ENST00000617246 FANCD2Q9BXW9 1451 aa4.59□□□□□ -1.67
LPP-220ENST00000617246 WDR7Q9Y4E6 1490 aa4.59□□□□□ -1.67
LPP-220ENST00000617246 PLEKHD1A6NEE1 506 aa4.59□□□□□ -1.67
LPP-220ENST00000617246 ERICH6Q7L0X2 663 aa4.59□□□□□ -1.68
LPP-220ENST00000617246 EIF4G3O43432 1585 aaKnown RBP4.59□□□□□ -1.68
LPP-220ENST00000617246 FHAD1B1AJZ9 1412 aa4.59□□□□□ -1.68
LPP-220ENST00000617246 CDK11BP21127 795 aaKnown RBP4.58□□□□□ -1.68
LPP-220ENST00000617246 WRNQ14191 1432 aaPredicted RBP eCLIP4.58□□□□□ -1.68
LPP-220ENST00000617246 SYNJ2O15056 1496 aa4.57□□□□□ -1.68
LPP-220ENST00000617246 CWC22Q9HCG8 908 aaKnown RBP4.57□□□□□ -1.68
LPP-220ENST00000617246 C16orf71Q8IYS4 520 aaPredicted RBP4.57□□□□□ -1.68
LPP-220ENST00000617246 CUX1P39880 1505 aa4.57□□□□□ -1.68
LPP-220ENST00000617246 G3V3G9 751 aa4.57□□□□□ -1.68
LPP-220ENST00000617246 DCAF8Q5TAQ9 597 aa4.57□□□□□ -1.68
LPP-220ENST00000617246 NEFLP07196 543 aa4.57□□□□□ -1.68
LPP-220ENST00000617246 SENP3Q9H4L4 574 aaPredicted RBP4.57□□□□□ -1.68
LPP-220ENST00000617246 DAXXQ9UER7 740 aaPredicted RBP4.57□□□□□ -1.68
LPP-220ENST00000617246 EPRSP07814 1512 aaKnown RBP4.57□□□□□ -1.68
LPP-220ENST00000617246 ARHGAP5Q13017 1502 aa4.57□□□□□ -1.68
LPP-220ENST00000617246 ITGAEP38570 1179 aa4.56□□□□□ -1.68
LPP-220ENST00000617246 LMOD2Q6P5Q4 547 aa4.56□□□□□ -1.68
LPP-220ENST00000617246 KLHL34Q8N239 644 aa4.56□□□□□ -1.68
LPP-220ENST00000617246 FKBP8Q14318 412 aa4.56□□□□□ -1.68
LPP-220ENST00000617246 WDHD1O75717 1129 aaPredicted RBP4.56□□□□□ -1.68
LPP-220ENST00000617246 MLECQ14165 292 aa4.56□□□□□ -1.68
LPP-220ENST00000617246 UACAQ9BZF9 1416 aa4.56□□□□□ -1.68
LPP-220ENST00000617246 KCNH8Q96L42 1107 aa4.56□□□□□ -1.68
LPP-220ENST00000617246 CANXP27824 592 aaKnown RBP4.55□□□□□ -1.68
LPP-220ENST00000617246 FER1L4A9Z1Z3 1794 aa4.54□□□□□ -1.68
LPP-220ENST00000617246 FYCO1Q9BQS8 1478 aa4.54□□□□□ -1.68
LPP-220ENST00000617246 GRIN2BQ13224 1484 aa4.54□□□□□ -1.68
LPP-220ENST00000617246 MAGI1Q96QZ7 1491 aaPredicted RBP4.54□□□□□ -1.68
LPP-220ENST00000617246 GCC2Q8IWJ2 1684 aa4.54□□□□□ -1.68
LPP-220ENST00000617246 NESP48681 1621 aa4.53□□□□□ -1.68
LPP-220ENST00000617246 EFCAB5A4FU69 1503 aa4.53□□□□□ -1.68
LPP-220ENST00000617246 SOGA1O94964 1423 aa4.53□□□□□ -1.68
LPP-220ENST00000617246 ZNF710Q8N1W2 664 aa4.53□□□□□ -1.68
LPP-220ENST00000617246 FMN1Q68DA7 1419 aa4.52□□□□□ -1.69
LPP-220ENST00000617246 KAT6BQ8WYB5 2073 aa4.52□□□□□ -1.69
LPP-220ENST00000617246 MSH5O43196 834 aa4.52□□□□□ -1.69
LPP-220ENST00000617246 CCNB3Q8WWL7 1395 aa4.52□□□□□ -1.69
LPP-220ENST00000617246 ADGBQ8N7X0 1667 aa4.51□□□□□ -1.69
LPP-220ENST00000617246 EIF3AQ14152 1382 aaKnown RBP4.51□□□□□ -1.69
LPP-220ENST00000617246 GAPVD1Q14C86 1478 aa4.51□□□□□ -1.69
LPP-220ENST00000617246 CYB5RLQ6IPT4 315 aa4.51□□□□□ -1.69
LPP-220ENST00000617246 SETD5Q9C0A6 1442 aa4.51□□□□□ -1.69
LPP-220ENST00000617246 KIF1BO60333 1816 aa4.51□□□□□ -1.69
LPP-220ENST00000617246 SMG6Q86US8 1419 aaKnown RBP4.5□□□□□ -1.69
LPP-220ENST00000617246 IQGAP2Q13576 1575 aa4.5□□□□□ -1.69
LPP-220ENST00000617246 SRPK2P78362 688 aaKnown RBP4.5□□□□□ -1.69
LPP-220ENST00000617246 CCDC88BA6NC98 1476 aa4.5□□□□□ -1.69
LPP-220ENST00000617246 CFAP44Q96MT7 982 aa4.5□□□□□ -1.69
LPP-220ENST00000617246 ARID3CA6NKF2 412 aa4.5□□□□□ -1.69
LPP-220ENST00000617246 PLEKHH2Q8IVE3 1493 aa4.49□□□□□ -1.69
LPP-220ENST00000617246 ROCK1Q13464 1354 aa4.49□□□□□ -1.69
LPP-220ENST00000617246 ATF3P18847 181 aa4.49□□□□□ -1.69
LPP-220ENST00000617246 ARXQ96QS3 562 aa4.49□□□□□ -1.69
LPP-220ENST00000617246 AKNAQ7Z591 1439 aa4.49□□□□□ -1.69
LPP-220ENST00000617246 SNAPC4Q5SXM2 1469 aa4.49□□□□□ -1.69
LPP-220ENST00000617246 RPRD2Q5VT52 1461 aaKnown RBP4.49□□□□□ -1.69
LPP-220ENST00000617246 FAM69CQ0P6D2 419 aa4.49□□□□□ -1.69
LPP-220ENST00000617246 CLSPNQ9HAW4 1339 aa4.49□□□□□ -1.69
LPP-220ENST00000617246 BICRAQ9NZM4 1560 aa4.49□□□□□ -1.69
LPP-220ENST00000617246 CSB-PGBD3P0DP91 1061 aa4.49□□□□□ -1.69
LPP-220ENST00000617246 CDCA8Q53HL2 280 aa4.48□□□□□ -1.69
LPP-220ENST00000617246 CHMP4AQ9BY43 222 aa4.48□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms