RNA–Protein interactions for RNA: ENST00000616170.4

SH3GLB1-205, Transcript of SH3 domain containing GRB2 like, endophilin B1, humanhuman

TSL 1 (best) BASIC

Gene SH3GLB1, Length 6,456 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3GLB1-205ENST00000616170 NAP1L5Q96NT1 182 aaPredicted RBP12.34□□□□□ -0.43
SH3GLB1-205ENST00000616170 BECN1Q14457 450 aa12.33□□□□□ -0.44
SH3GLB1-205ENST00000616170 EIF4G2P78344 907 aaKnown RBP eCLIP12.32□□□□□ -0.44
SH3GLB1-205ENST00000616170 DEKP35659 375 aaKnown RBP12.32□□□□□ -0.44
SH3GLB1-205ENST00000616170 TPRNQ4KMQ1 711 aa12.32□□□□□ -0.44
SH3GLB1-205ENST00000616170 NCLP19338 710 aaKnown RBP12.31□□□□□ -0.44
SH3GLB1-205ENST00000616170 B4GALNT3Q6L9W6 998 aa12.31□□□□□ -0.44
SH3GLB1-205ENST00000616170 RRP7BPQ9NSQ0 103 aa12.3□□□□□ -0.44
SH3GLB1-205ENST00000616170 CLIP1P30622 1438 aa12.29□□□□□ -0.44
SH3GLB1-205ENST00000616170 PPP4R2Q9NY27 417 aa12.28□□□□□ -0.44
SH3GLB1-205ENST00000616170 SENP3Q9H4L4 574 aaPredicted RBP12.28□□□□□ -0.44
SH3GLB1-205ENST00000616170 RBM19Q9Y4C8 960 aaKnown RBP12.28□□□□□ -0.44
SH3GLB1-205ENST00000616170 PPM1GO15355 546 aaPredicted RBP12.27□□□□□ -0.45
SH3GLB1-205ENST00000616170 CEP162Q5TB80 1403 aa12.27□□□□□ -0.45
SH3GLB1-205ENST00000616170 RGS3P49796 1198 aa12.25□□□□□ -0.45
SH3GLB1-205ENST00000616170 ERICH6BQ5W0A0 696 aa12.24□□□□□ -0.45
SH3GLB1-205ENST00000616170 SIN3AQ96ST3 1273 aa12.24□□□□□ -0.45
SH3GLB1-205ENST00000616170 PTMAP06454 111 aaKnown RBP12.23□□□□□ -0.45
SH3GLB1-205ENST00000616170 DNTTIP2Q5QJE6 756 aaKnown RBP12.23□□□□□ -0.45
SH3GLB1-205ENST00000616170 MYH16Q9H6N6 1097 aa12.23□□□□□ -0.45
SH3GLB1-205ENST00000616170 MTUS2Q5JR59 1369 aa12.23□□□□□ -0.45
SH3GLB1-205ENST00000616170 PLPPR3Q6T4P5 718 aa12.23□□□□□ -0.45
SH3GLB1-205ENST00000616170 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.23□□□□□ -0.45
SH3GLB1-205ENST00000616170 STAG3Q9UJ98 1225 aa12.23□□□□□ -0.45
SH3GLB1-205ENST00000616170 GOLGA6L22H0YM25 854 aa12.21□□□□□ -0.45
SH3GLB1-205ENST00000616170 ARID4BQ4LE39 1312 aaPredicted RBP12.2□□□□□ -0.46
SH3GLB1-205ENST00000616170 TNNT2P45379 298 aaPredicted RBP12.19□□□□□ -0.46
SH3GLB1-205ENST00000616170 NACADO15069 1562 aa12.17□□□□□ -0.46
SH3GLB1-205ENST00000616170 RGL3Q3MIN7 710 aa12.17□□□□□ -0.46
SH3GLB1-205ENST00000616170 SPRYD3Q8NCJ5 442 aa12.17□□□□□ -0.46
SH3GLB1-205ENST00000616170 TSHZ2Q9NRE2 1034 aa12.17□□□□□ -0.46
SH3GLB1-205ENST00000616170 NEUROD2Q15784 382 aa12.16□□□□□ -0.46
SH3GLB1-205ENST00000616170 GOLGA3Q08378 1498 aa12.15□□□□□ -0.46
SH3GLB1-205ENST00000616170 PLCB2Q00722 1185 aa12.14□□□□□ -0.47
SH3GLB1-205ENST00000616170 AMER1Q5JTC6 1135 aaPredicted RBP12.14□□□□□ -0.47
SH3GLB1-205ENST00000616170 FRAT1Q92837 279 aaPredicted RBP12.13□□□□□ -0.47
SH3GLB1-205ENST00000616170 FTSJ3Q8IY81 847 aaKnown RBP12.13□□□□□ -0.47
SH3GLB1-205ENST00000616170 TSPY4P0CV99 314 aa12.12□□□□□ -0.47
SH3GLB1-205ENST00000616170 TSPY10P0CW01 314 aa12.12□□□□□ -0.47
SH3GLB1-205ENST00000616170 CC2D1BQ5T0F9 858 aaKnown RBP12.11□□□□□ -0.47
SH3GLB1-205ENST00000616170 PLEKHG5O94827 1062 aa12.11□□□□□ -0.47
SH3GLB1-205ENST00000616170 ZBTB7CA1YPR0 619 aa12.11□□□□□ -0.47
SH3GLB1-205ENST00000616170 HSP90AB1P08238 724 aaKnown RBP12.1□□□□□ -0.47
SH3GLB1-205ENST00000616170 CARD11Q9BXL7 1154 aa12.1□□□□□ -0.47
SH3GLB1-205ENST00000616170 ESF1Q9H501 851 aaKnown RBP12.1□□□□□ -0.47
SH3GLB1-205ENST00000616170 ARID3AQ99856 593 aa12.09□□□□□ -0.47
SH3GLB1-205ENST00000616170 KNSTRNQ9Y448 316 aa12.08□□□□□ -0.48
SH3GLB1-205ENST00000616170 CASC1Q6TDU7 716 aa12.06□□□□□ -0.48
SH3GLB1-205ENST00000616170 TAOK2Q9UL54 1235 aa12.06□□□□□ -0.48
SH3GLB1-205ENST00000616170 TNIKQ9UKE5 1360 aa12.04□□□□□ -0.48
SH3GLB1-205ENST00000616170 GZF1Q9H116 711 aaPredicted RBP12.04□□□□□ -0.48
SH3GLB1-205ENST00000616170 CDK11BP21127 795 aaKnown RBP12.03□□□□□ -0.48
SH3GLB1-205ENST00000616170 MSNP26038 577 aaKnown RBP12.02□□□□□ -0.48
SH3GLB1-205ENST00000616170 ZRSR1Q15695 479 aaKnown RBP12.02□□□□□ -0.48
SH3GLB1-205ENST00000616170 L1TD1Q5T7N2 865 aaKnown RBP12.02□□□□□ -0.48
SH3GLB1-205ENST00000616170 HSCBQ8IWL3 235 aa12.01□□□□□ -0.49
SH3GLB1-205ENST00000616170 CFAP53Q96M91 514 aa12.01□□□□□ -0.49
SH3GLB1-205ENST00000616170 RSF1Q96T23 1441 aaPredicted RBP12.01□□□□□ -0.49
SH3GLB1-205ENST00000616170 CCER2I3L3R5 266 aa12□□□□□ -0.49
SH3GLB1-205ENST00000616170 SLKQ9H2G2 1235 aaPredicted RBP11.99□□□□□ -0.49
SH3GLB1-205ENST00000616170 C14orf37Q86TY3 774 aa11.99□□□□□ -0.49
SH3GLB1-205ENST00000616170 HSPA5P11021 654 aaKnown RBP11.98□□□□□ -0.49
SH3GLB1-205ENST00000616170 EEA1Q15075 1411 aa11.98□□□□□ -0.49
SH3GLB1-205ENST00000616170 A0A0G2JS52 829 aa11.97□□□□□ -0.49
SH3GLB1-205ENST00000616170 KCNH8Q96L42 1107 aa11.96□□□□□ -0.49
SH3GLB1-205ENST00000616170 CEP164Q9UPV0 1460 aa11.96□□□□□ -0.49
SH3GLB1-205ENST00000616170 MAPK8IP3Q9UPT6 1336 aa11.96□□□□□ -0.49
SH3GLB1-205ENST00000616170 CCNB3Q8WWL7 1395 aa11.95□□□□□ -0.5
SH3GLB1-205ENST00000616170 IPO9Q96P70 1041 aaKnown RBP11.95□□□□□ -0.5
SH3GLB1-205ENST00000616170 WRNQ14191 1432 aaPredicted RBP eCLIP11.95□□□□□ -0.5
SH3GLB1-205ENST00000616170 TULP1O00294 542 aaPredicted RBP11.93□□□□□ -0.5
SH3GLB1-205ENST00000616170 U2SURPO15042 1029 aaKnown RBP11.93□□□□□ -0.5
SH3GLB1-205ENST00000616170 CDCA8Q53HL2 280 aa11.93□□□□□ -0.5
SH3GLB1-205ENST00000616170 CHAF1AQ13111 956 aaPredicted RBP11.92□□□□□ -0.5
SH3GLB1-205ENST00000616170 FOXD1Q16676 465 aa11.92□□□□□ -0.5
SH3GLB1-205ENST00000616170 PNNQ9H307 717 aaKnown RBP11.92□□□□□ -0.5
SH3GLB1-205ENST00000616170 CFDP1Q9UEE9 299 aaPredicted RBP11.92□□□□□ -0.5
SH3GLB1-205ENST00000616170 DRC7Q8IY82 874 aa11.91□□□□□ -0.5
SH3GLB1-205ENST00000616170 NPM1P06748 294 aaKnown RBP eCLIP11.91□□□□□ -0.5
SH3GLB1-205ENST00000616170 RCAN3Q9UKA8 241 aa11.91□□□□□ -0.5
SH3GLB1-205ENST00000616170 NAP1L2Q9ULW6 460 aaPredicted RBP11.91□□□□□ -0.5
SH3GLB1-205ENST00000616170 DCAF11Q8TEB1 546 aa11.91□□□□□ -0.5
SH3GLB1-205ENST00000616170 CHMP7Q8WUX9 453 aaPredicted RBP11.9□□□□□ -0.5
SH3GLB1-205ENST00000616170 SOGA1O94964 1423 aa11.89□□□□□ -0.51
SH3GLB1-205ENST00000616170 PPP1R15AO75807 674 aaPredicted RBP11.89□□□□□ -0.51
SH3GLB1-205ENST00000616170 GOLGA6L6A8MZA4 724 aa11.89□□□□□ -0.51
SH3GLB1-205ENST00000616170 TCERG1O14776 1098 aaKnown RBP11.88□□□□□ -0.51
SH3GLB1-205ENST00000616170 APBB1O00213 710 aa11.88□□□□□ -0.51
SH3GLB1-205ENST00000616170 SETD5Q9C0A6 1442 aa11.88□□□□□ -0.51
SH3GLB1-205ENST00000616170 OS9Q13438 667 aaPredicted RBP11.88□□□□□ -0.51
SH3GLB1-205ENST00000616170 NUDCQ9Y266 331 aa11.88□□□□□ -0.51
SH3GLB1-205ENST00000616170 KCNJ4P48050 445 aa11.87□□□□□ -0.51
SH3GLB1-205ENST00000616170 RB1CC1Q8TDY2 1594 aa11.87□□□□□ -0.51
SH3GLB1-205ENST00000616170 KANK4Q5T7N3 995 aaPredicted RBP11.87□□□□□ -0.51
SH3GLB1-205ENST00000616170 PLEKHD1A6NEE1 506 aa11.87□□□□□ -0.51
SH3GLB1-205ENST00000616170 GOLGA6L3A6NEY3 463 aa11.87□□□□□ -0.51
SH3GLB1-205ENST00000616170 SLC4A3P48751 1232 aa11.87□□□□□ -0.51
SH3GLB1-205ENST00000616170 FGD1P98174 961 aa11.87□□□□□ -0.51
SH3GLB1-205ENST00000616170 GOLGA6L4A6NEF3 574 aa11.86□□□□□ -0.51
SH3GLB1-205ENST00000616170 FOXD4L1Q9NU39 408 aa11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms