RNA–Protein interactions for RNA: ENST00000606476.1

LINC00993-204, long intergenic non-protein coding RNA 993, humanhuman

TSL 5 BASIC

Gene LINC00993, Length 500 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00993-204ENST00000606476 POTEFA5A3E0 1075 aa9.56□□□□□ -0.88
LINC00993-204ENST00000606476 PABPN1Q86U42 306 aaKnown RBP eCLIP9.56□□□□□ -0.88
LINC00993-204ENST00000606476 MKRN4PQ13434 485 aaPredicted RBP9.53□□□□□ -0.88
LINC00993-204ENST00000606476 MS4A3Q96HJ5 214 aa9.48□□□□□ -0.89
LINC00993-204ENST00000606476 ABCC9O60706 1549 aa9.46□□□□□ -0.89
LINC00993-204ENST00000606476 ATN1P54259 1190 aaPredicted RBP9.45□□□□□ -0.9
LINC00993-204ENST00000606476 PAK3O75914 559 aaPredicted RBP9.4□□□□□ -0.9
LINC00993-204ENST00000606476 CCDC180Q9P1Z9 1646 aa9.4□□□□□ -0.9
LINC00993-204ENST00000606476 CREBZFQ9NS37 354 aa9.39□□□□□ -0.91
LINC00993-204ENST00000606476 MARVELD3Q96A59 401 aa9.36□□□□□ -0.91
LINC00993-204ENST00000606476 SLAIN1Q8ND83 568 aa9.35□□□□□ -0.91
LINC00993-204ENST00000606476 COLQQ9Y215 455 aaPredicted RBP9.34□□□□□ -0.91
LINC00993-204ENST00000606476 KRTAP3-3Q9BYR6 98 aa9.33□□□□□ -0.92
LINC00993-204ENST00000606476 KRTAP3-2Q9BYR7 98 aa9.33□□□□□ -0.92
LINC00993-204ENST00000606476 TMEM121BQ9BXQ6 578 aaPredicted RBP9.31□□□□□ -0.92
LINC00993-204ENST00000606476 FOXD4L1Q9NU39 408 aa9.27□□□□□ -0.93
LINC00993-204ENST00000606476 BMP2KQ9NSY1 1161 aaPredicted RBP9.23□□□□□ -0.93
LINC00993-204ENST00000606476 POTEB3A0JP26 581 aa9.21□□□□□ -0.94
LINC00993-204ENST00000606476 SEC24BO95487 1268 aa9.21□□□□□ -0.94
LINC00993-204ENST00000606476 POTEBQ6S5H4 581 aa9.21□□□□□ -0.94
LINC00993-204ENST00000606476 TRPC6Q9Y210 931 aa9.2□□□□□ -0.94
LINC00993-204ENST00000606476 DCAF8L2P0C7V8 631 aa9.12□□□□□ -0.95
LINC00993-204ENST00000606476 RNF166Q96A37 237 aaPredicted RBP9.11□□□□□ -0.95
LINC00993-204ENST00000606476 HS3ST6Q96QI5 342 aa9.11□□□□□ -0.95
LINC00993-204ENST00000606476 EMP3P54852 163 aa9.1□□□□□ -0.95
LINC00993-204ENST00000606476 MNX1P50219 401 aaPredicted RBP9.07□□□□□ -0.96
LINC00993-204ENST00000606476 NPM1P06748 294 aaKnown RBP eCLIP9.06□□□□□ -0.96
LINC00993-204ENST00000606476 FAM205CA6NFA0 338 aa9.05□□□□□ -0.96
LINC00993-204ENST00000606476 SNPHO15079 494 aa9.05□□□□□ -0.96
LINC00993-204ENST00000606476 ATXN8OSP0DMR3 200 aa9.05□□□□□ -0.96
LINC00993-204ENST00000606476 TIE1P35590 1138 aa9.04□□□□□ -0.96
LINC00993-204ENST00000606476 TTLL13PA6NNM8 815 aa9.02□□□□□ -0.97
LINC00993-204ENST00000606476 KIF12Q96FN5 646 aa9.02□□□□□ -0.97
LINC00993-204ENST00000606476 IER5LQ5T953 404 aa8.98□□□□□ -0.97
LINC00993-204ENST00000606476 CCDC61Q9Y6R9 512 aa8.98□□□□□ -0.97
LINC00993-204ENST00000606476 TSPYL2Q9H2G4 693 aaPredicted RBP8.97□□□□□ -0.97
LINC00993-204ENST00000606476 RB1CC1Q8TDY2 1594 aa8.97□□□□□ -0.97
LINC00993-204ENST00000606476 TRIM35Q9UPQ4 493 aa8.96□□□□□ -0.98
LINC00993-204ENST00000606476 MYT1LQ9UL68 1186 aa8.93□□□□□ -0.98
LINC00993-204ENST00000606476 NACADO15069 1562 aa8.9□□□□□ -0.98
LINC00993-204ENST00000606476 MAP3K13O43283 966 aa8.9□□□□□ -0.98
LINC00993-204ENST00000606476 STAG3Q9UJ98 1225 aa8.9□□□□□ -0.98
LINC00993-204ENST00000606476 PLCG2P16885 1265 aa8.86□□□□□ -0.99
LINC00993-204ENST00000606476 EIF2AK3Q9NZJ5 1116 aaKnown RBP8.84□□□□□ -0.99
LINC00993-204ENST00000606476 ZBTB22O15209 634 aa8.83□□□□□ -1
LINC00993-204ENST00000606476 ZCCHC6Q5VYS8 1495 aaKnown RBP8.81□□□□□ -1
LINC00993-204ENST00000606476 IRX5P78411 483 aaPredicted RBP8.79□□□□□ -1
LINC00993-204ENST00000606476 PLA2G2EQ9NZK7 142 aa8.76□□□□□ -1.01
LINC00993-204ENST00000606476 MYO15BQ96JP2 1530 aa8.75□□□□□ -1.01
LINC00993-204ENST00000606476 SLC4A1APQ9BWU0 796 aaKnown RBP8.71□□□□□ -1.02
LINC00993-204ENST00000606476 SCRIBQ14160 1630 aa8.71□□□□□ -1.02
LINC00993-204ENST00000606476 DCAF1Q9Y4B6 1507 aa8.7□□□□□ -1.02
LINC00993-204ENST00000606476 UNC13AQ9UPW8 1703 aa8.69□□□□□ -1.02
LINC00993-204ENST00000606476 OCEL1Q9H607 264 aa8.67□□□□□ -1.02
LINC00993-204ENST00000606476 BICRAQ9NZM4 1560 aa8.66□□□□□ -1.02
LINC00993-204ENST00000606476 ERBB3P21860 1342 aa8.63□□□□□ -1.03
LINC00993-204ENST00000606476 TMEM106CQ9BVX2 250 aa8.63□□□□□ -1.03
LINC00993-204ENST00000606476 PTGER2P43116 358 aa8.6□□□□□ -1.03
LINC00993-204ENST00000606476 PCDHB13Q9Y5F0 798 aa8.59□□□□□ -1.03
LINC00993-204ENST00000606476 C3orf67Q6ZVT6 689 aa8.58□□□□□ -1.04
LINC00993-204ENST00000606476 IRX2Q9BZI1 471 aaPredicted RBP8.57□□□□□ -1.04
LINC00993-204ENST00000606476 HOXB1P14653 301 aaPredicted RBP8.56□□□□□ -1.04
LINC00993-204ENST00000606476 VARS2Q5ST30 1063 aaKnown RBP8.56□□□□□ -1.04
LINC00993-204ENST00000606476 HOXB3P14651 431 aaPredicted RBP8.55□□□□□ -1.04
LINC00993-204ENST00000606476 RASEFQ8IZ41 740 aa8.55□□□□□ -1.04
LINC00993-204ENST00000606476 IFNL1Q8IU54 200 aa8.54□□□□□ -1.04
LINC00993-204ENST00000606476 SGIP1Q9BQI5 828 aa8.54□□□□□ -1.04
LINC00993-204ENST00000606476 SHROOM4Q9ULL8 1493 aa8.52□□□□□ -1.05
LINC00993-204ENST00000606476 ANKRD13DQ6ZTN6 518 aa8.49□□□□□ -1.05
LINC00993-204ENST00000606476 EIF4G1Q04637 1599 aaKnown RBP8.48□□□□□ -1.05
LINC00993-204ENST00000606476 CC2D2AQ9P2K1 1620 aa8.48□□□□□ -1.05
LINC00993-204ENST00000606476 ZNF687Q8N1G0 1237 aa8.48□□□□□ -1.05
LINC00993-204ENST00000606476 CECR2Q9BXF3 1484 aa8.48□□□□□ -1.05
LINC00993-204ENST00000606476 PDCD7Q8N8D1 485 aaKnown RBP8.46□□□□□ -1.06
LINC00993-204ENST00000606476 ZNF710Q8N1W2 664 aa8.43□□□□□ -1.06
LINC00993-204ENST00000606476 HCSTQ9UBK5 93 aa8.42□□□□□ -1.06
LINC00993-204ENST00000606476 L3MBTL3Q96JM7 780 aaPredicted RBP8.39□□□□□ -1.07
LINC00993-204ENST00000606476 RGS20O76081 388 aa8.33□□□□□ -1.08
LINC00993-204ENST00000606476 Q6ZNB5 142 aa8.33□□□□□ -1.08
LINC00993-204ENST00000606476 SPDYE4A6NLX3 237 aa8.32□□□□□ -1.08
LINC00993-204ENST00000606476 LSM11P83369 360 aaKnown RBP eCLIP8.32□□□□□ -1.08
LINC00993-204ENST00000606476 DOK7Q18PE1 504 aa8.31□□□□□ -1.08
LINC00993-204ENST00000606476 LOC100996750A0A140TA64 210 aa8.27□□□□□ -1.09
LINC00993-204ENST00000606476 KRTAP4-6Q9BYQ5 205 aa8.27□□□□□ -1.09
LINC00993-204ENST00000606476 ATAD2BQ9ULI0 1458 aa8.26□□□□□ -1.09
LINC00993-204ENST00000606476 SMARCA4P51532 1647 aa8.25□□□□□ -1.09
LINC00993-204ENST00000606476 BAZ1AQ9NRL2 1556 aaPredicted RBP8.23□□□□□ -1.09
LINC00993-204ENST00000606476 LCE2BO14633 110 aa8.23□□□□□ -1.09
LINC00993-204ENST00000606476 NCAPD3P42695 1498 aa8.22□□□□□ -1.09
LINC00993-204ENST00000606476 SMARCA2P51531 1590 aa8.22□□□□□ -1.09
LINC00993-204ENST00000606476 BAZ1BQ9UIG0 1483 aaKnown RBP8.21□□□□□ -1.09
LINC00993-204ENST00000606476 RIMBP2O15034 1052 aa8.21□□□□□ -1.1
LINC00993-204ENST00000606476 MROH2BQ7Z745 1585 aa8.21□□□□□ -1.1
LINC00993-204ENST00000606476 DPY19L2Q6NUT2 758 aa8.19□□□□□ -1.1
LINC00993-204ENST00000606476 GPR153Q6NV75 609 aa8.18□□□□□ -1.1
LINC00993-204ENST00000606476 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP8.18□□□□□ -1.1
LINC00993-204ENST00000606476 ERCC6Q03468 1493 aa8.18□□□□□ -1.1
LINC00993-204ENST00000606476 HMGXB3Q12766 1538 aa8.16□□□□□ -1.1
LINC00993-204ENST00000606476 POTEEQ6S8J3 1075 aa8.15□□□□□ -1.1
LINC00993-204ENST00000606476 PCDHB8Q9UN66 801 aa8.15□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms