RNA–Protein interactions for RNA: ENST00000604911.1

LSM1P2-201, Transcript of LSM1 homolog, mRNA degradation associated pseudogene 2, humanhuman

BASIC

Gene LSM1P2, Length 322 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM1P2-201ENST00000604911 PLCD3Q8N3E9 789 aa12.72□□□□□ -0.37
LSM1P2-201ENST00000604911 PELP1Q8IZL8 1130 aaKnown RBP12.71□□□□□ -0.37
LSM1P2-201ENST00000604911 KIF12Q96FN5 646 aa12.71□□□□□ -0.37
LSM1P2-201ENST00000604911 ASTLQ6HA08 431 aaPredicted RBP12.7□□□□□ -0.38
LSM1P2-201ENST00000604911 ATMINO43313 823 aaPredicted RBP12.67□□□□□ -0.38
LSM1P2-201ENST00000604911 POTEB2H3BUK9 544 aa12.65□□□□□ -0.38
LSM1P2-201ENST00000604911 NUBP1P53384 320 aa12.65□□□□□ -0.38
LSM1P2-201ENST00000604911 ZBTB47Q9UFB7 747 aaPredicted RBP12.65□□□□□ -0.38
LSM1P2-201ENST00000604911 MAP3K13O43283 966 aa12.61□□□□□ -0.39
LSM1P2-201ENST00000604911 FBXO3Q9UK99 471 aa12.58□□□□□ -0.4
LSM1P2-201ENST00000604911 TRPC6Q9Y210 931 aa12.58□□□□□ -0.4
LSM1P2-201ENST00000604911 ATN1P54259 1190 aaPredicted RBP12.57□□□□□ -0.4
LSM1P2-201ENST00000604911 SLC39A7Q92504 469 aa12.57□□□□□ -0.4
LSM1P2-201ENST00000604911 OTUD5Q96G74 571 aa12.57□□□□□ -0.4
LSM1P2-201ENST00000604911 C7P10643 843 aa12.56□□□□□ -0.4
LSM1P2-201ENST00000604911 METRNQ9UJH8 293 aa12.56□□□□□ -0.4
LSM1P2-201ENST00000604911 BMP2KQ9NSY1 1161 aaPredicted RBP12.55□□□□□ -0.4
LSM1P2-201ENST00000604911 SGIP1Q9BQI5 828 aa12.54□□□□□ -0.4
LSM1P2-201ENST00000604911 TIE1P35590 1138 aa12.53□□□□□ -0.4
LSM1P2-201ENST00000604911 FAM212AQ96EL1 285 aa12.5□□□□□ -0.41
LSM1P2-201ENST00000604911 POTEJP0CG39 1038 aa12.48□□□□□ -0.41
LSM1P2-201ENST00000604911 PCDHB13Q9Y5F0 798 aa12.47□□□□□ -0.41
LSM1P2-201ENST00000604911 TTLL13PA6NNM8 815 aa12.46□□□□□ -0.41
LSM1P2-201ENST00000604911 POTEFA5A3E0 1075 aa12.45□□□□□ -0.42
LSM1P2-201ENST00000604911 VASPP50552 380 aaPredicted RBP12.44□□□□□ -0.42
LSM1P2-201ENST00000604911 IFNL1Q8IU54 200 aa12.43□□□□□ -0.42
LSM1P2-201ENST00000604911 DCAF8Q5TAQ9 597 aa12.37□□□□□ -0.43
LSM1P2-201ENST00000604911 TRIM35Q9UPQ4 493 aa12.36□□□□□ -0.43
LSM1P2-201ENST00000604911 MAMSTRQ6ZN01 415 aa12.35□□□□□ -0.43
LSM1P2-201ENST00000604911 COLQQ9Y215 455 aaPredicted RBP12.35□□□□□ -0.43
LSM1P2-201ENST00000604911 PYGBP11216 843 aa12.34□□□□□ -0.43
LSM1P2-201ENST00000604911 IER5LQ5T953 404 aa12.34□□□□□ -0.43
LSM1P2-201ENST00000604911 KLHL34Q8N239 644 aa12.31□□□□□ -0.44
LSM1P2-201ENST00000604911 TMEM106CQ9BVX2 250 aa12.31□□□□□ -0.44
LSM1P2-201ENST00000604911 SEC24BO95487 1268 aa12.27□□□□□ -0.45
LSM1P2-201ENST00000604911 GSE1Q14687 1217 aa12.27□□□□□ -0.45
LSM1P2-201ENST00000604911 SCUBE2Q9NQ36 999 aa12.27□□□□□ -0.45
LSM1P2-201ENST00000604911 IFNLR1Q8IU57 520 aaPredicted RBP12.25□□□□□ -0.45
LSM1P2-201ENST00000604911 PCDHB8Q9UN66 801 aa12.25□□□□□ -0.45
LSM1P2-201ENST00000604911 CHRM1P11229 460 aaPredicted RBP12.23□□□□□ -0.45
LSM1P2-201ENST00000604911 IRX5P78411 483 aaPredicted RBP12.21□□□□□ -0.45
LSM1P2-201ENST00000604911 LCE2DQ5TA82 110 aaPredicted RBP12.18□□□□□ -0.46
LSM1P2-201ENST00000604911 POTEMA6NI47 508 aa12.17□□□□□ -0.46
LSM1P2-201ENST00000604911 ZNF467Q7Z7K2 595 aaPredicted RBP12.17□□□□□ -0.46
LSM1P2-201ENST00000604911 SPOCK2Q92563 424 aa12.17□□□□□ -0.46
LSM1P2-201ENST00000604911 PLCG2P16885 1265 aa12.15□□□□□ -0.46
LSM1P2-201ENST00000604911 POTEGQ6S5H5 508 aa12.14□□□□□ -0.47
LSM1P2-201ENST00000604911 OCEL1Q9H607 264 aa12.12□□□□□ -0.47
LSM1P2-201ENST00000604911 FAM163AQ96GL9 167 aaPredicted RBP12.07□□□□□ -0.48
LSM1P2-201ENST00000604911 PSEN1P49768 467 aa12.06□□□□□ -0.48
LSM1P2-201ENST00000604911 CIZ1Q9ULV3 898 aaPredicted RBP12.06□□□□□ -0.48
LSM1P2-201ENST00000604911 PDCD7Q8N8D1 485 aaKnown RBP12.04□□□□□ -0.48
LSM1P2-201ENST00000604911 SLAIN1Q8ND83 568 aa12.03□□□□□ -0.48
LSM1P2-201ENST00000604911 PDAP1Q13442 181 aaKnown RBP12.02□□□□□ -0.49
LSM1P2-201ENST00000604911 ILDR1Q86SU0 546 aaPredicted RBP12□□□□□ -0.49
LSM1P2-201ENST00000604911 MKRN3Q13064 507 aaKnown RBP11.99□□□□□ -0.49
LSM1P2-201ENST00000604911 PCDH10Q9P2E7 1040 aa11.99□□□□□ -0.49
LSM1P2-201ENST00000604911 GOLGA2Q08379 1002 aa11.98□□□□□ -0.49
LSM1P2-201ENST00000604911 PLSCR2Q9NRY7 297 aa11.98□□□□□ -0.49
LSM1P2-201ENST00000604911 TRIM41Q8WV44 630 aa11.95□□□□□ -0.5
LSM1P2-201ENST00000604911 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.94□□□□□ -0.5
LSM1P2-201ENST00000604911 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.93□□□□□ -0.5
LSM1P2-201ENST00000604911 ST18O60284 1047 aa11.91□□□□□ -0.5
LSM1P2-201ENST00000604911 L3MBTL3Q96JM7 780 aaPredicted RBP11.9□□□□□ -0.5
LSM1P2-201ENST00000604911 CABP2Q9NPB3 220 aa11.9□□□□□ -0.5
LSM1P2-201ENST00000604911 DPY19L2Q6NUT2 758 aa11.86□□□□□ -0.51
LSM1P2-201ENST00000604911 C3orf67Q6ZVT6 689 aa11.84□□□□□ -0.51
LSM1P2-201ENST00000604911 RNF25Q96BH1 459 aaPredicted RBP11.84□□□□□ -0.51
LSM1P2-201ENST00000604911 SNPHO15079 494 aa11.82□□□□□ -0.52
LSM1P2-201ENST00000604911 TMEM121BQ9BXQ6 578 aaPredicted RBP11.81□□□□□ -0.52
LSM1P2-201ENST00000604911 RIOK3O14730 519 aaKnown RBP11.79□□□□□ -0.52
LSM1P2-201ENST00000604911 EFCAB3Q8N7B9 438 aa11.79□□□□□ -0.52
LSM1P2-201ENST00000604911 CDAN1Q8IWY9 1227 aa11.78□□□□□ -0.52
LSM1P2-201ENST00000604911 BOLA1Q9Y3E2 137 aa11.78□□□□□ -0.52
LSM1P2-201ENST00000604911 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.73□□□□□ -0.53
LSM1P2-201ENST00000604911 VGFO15240 615 aaPredicted RBP11.73□□□□□ -0.53
LSM1P2-201ENST00000604911 ZFP91Q96JP5 570 aaPredicted RBP11.73□□□□□ -0.53
LSM1P2-201ENST00000604911 SOX12O15370 315 aa11.69□□□□□ -0.54
LSM1P2-201ENST00000604911 MARVELD3Q96A59 401 aa11.69□□□□□ -0.54
LSM1P2-201ENST00000604911 G3V3G9 751 aa11.68□□□□□ -0.54
LSM1P2-201ENST00000604911 MS4A4AQ96JQ5 239 aa11.67□□□□□ -0.54
LSM1P2-201ENST00000604911 HOXB3P14651 431 aaPredicted RBP11.65□□□□□ -0.54
LSM1P2-201ENST00000604911 MICALL2Q8IY33 904 aa11.63□□□□□ -0.55
LSM1P2-201ENST00000604911 PHF8Q9UPP1 1060 aa11.62□□□□□ -0.55
LSM1P2-201ENST00000604911 EMP3P54852 163 aa11.6□□□□□ -0.55
LSM1P2-201ENST00000604911 TMEM92Q6UXU6 159 aa11.59□□□□□ -0.55
LSM1P2-201ENST00000604911 TAOK2Q9UL54 1235 aa11.59□□□□□ -0.55
LSM1P2-201ENST00000604911 POTEB3A0JP26 581 aa11.58□□□□□ -0.56
LSM1P2-201ENST00000604911 PKD2Q13563 968 aa11.58□□□□□ -0.56
LSM1P2-201ENST00000604911 POTEBQ6S5H4 581 aa11.58□□□□□ -0.56
LSM1P2-201ENST00000604911 BCL11BQ9C0K0 894 aaPredicted RBP11.58□□□□□ -0.56
LSM1P2-201ENST00000604911 FBXO22Q8NEZ5 403 aa11.57□□□□□ -0.56
LSM1P2-201ENST00000604911 ECM2O94769 699 aaPredicted RBP11.56□□□□□ -0.56
LSM1P2-201ENST00000604911 HS3ST6Q96QI5 342 aa11.55□□□□□ -0.56
LSM1P2-201ENST00000604911 HOXB1P14653 301 aaPredicted RBP11.54□□□□□ -0.56
LSM1P2-201ENST00000604911 NLRP6P59044 892 aa11.54□□□□□ -0.56
LSM1P2-201ENST00000604911 DOK7Q18PE1 504 aa11.53□□□□□ -0.56
LSM1P2-201ENST00000604911 STK24Q9Y6E0 443 aa11.53□□□□□ -0.56
LSM1P2-201ENST00000604911 FAM205CA6NFA0 338 aa11.52□□□□□ -0.57
LSM1P2-201ENST00000604911 RGL2O15211 777 aa11.52□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 152.4 ms