RNA–Protein interactions for RNA: ENST00000594814.5

LRIT3-202, Transcript of leucine rich repeat, Ig-like and transmembrane domains 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene LRIT3, Length 3,566 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRIT3-202ENST00000594814 NEUROD1Q13562 356 aa6.47□□□□□ -1.37
LRIT3-202ENST00000594814 CUX1P39880 1505 aa6.46□□□□□ -1.37
LRIT3-202ENST00000594814 PDIA4P13667 645 aaKnown RBP6.46□□□□□ -1.37
LRIT3-202ENST00000594814 IGSF3O75054 1194 aa6.46□□□□□ -1.38
LRIT3-202ENST00000594814 WDR62O43379 1518 aa6.46□□□□□ -1.38
LRIT3-202ENST00000594814 WDR97A6NE52 1622 aa6.45□□□□□ -1.38
LRIT3-202ENST00000594814 WRNQ14191 1432 aaPredicted RBP eCLIP6.45□□□□□ -1.38
LRIT3-202ENST00000594814 PRDM2Q13029 1718 aa6.45□□□□□ -1.38
LRIT3-202ENST00000594814 RANGAP1P46060 587 aaPredicted RBP6.44□□□□□ -1.38
LRIT3-202ENST00000594814 DHX30Q7L2E3 1194 aaKnown RBP eCLIP6.44□□□□□ -1.38
LRIT3-202ENST00000594814 UBTFP17480 764 aaKnown RBP6.43□□□□□ -1.38
LRIT3-202ENST00000594814 CHMP4AQ9BY43 222 aa6.43□□□□□ -1.38
LRIT3-202ENST00000594814 FANCD2Q9BXW9 1451 aa6.43□□□□□ -1.38
LRIT3-202ENST00000594814 URB2Q14146 1524 aaKnown RBP6.42□□□□□ -1.38
LRIT3-202ENST00000594814 KIF21AQ7Z4S6 1674 aa6.41□□□□□ -1.38
LRIT3-202ENST00000594814 RAD54L2Q9Y4B4 1467 aa6.4□□□□□ -1.38
LRIT3-202ENST00000594814 TOP2BQ02880 1626 aa6.39□□□□□ -1.39
LRIT3-202ENST00000594814 DIEXFQ68CQ4 756 aaKnown RBP6.38□□□□□ -1.39
LRIT3-202ENST00000594814 RSPH4AQ5TD94 716 aa6.38□□□□□ -1.39
LRIT3-202ENST00000594814 ERICH6BQ5W0A0 696 aa6.37□□□□□ -1.39
LRIT3-202ENST00000594814 BIVM-ERCC5R4GMW8 1640 aa6.36□□□□□ -1.39
LRIT3-202ENST00000594814 TOPBP1Q92547 1522 aa6.36□□□□□ -1.39
LRIT3-202ENST00000594814 FGD5Q6ZNL6 1462 aa6.36□□□□□ -1.39
LRIT3-202ENST00000594814 POLA1P09884 1462 aaPredicted RBP6.35□□□□□ -1.39
LRIT3-202ENST00000594814 FGD1P98174 961 aa6.34□□□□□ -1.39
LRIT3-202ENST00000594814 CEP164Q9UPV0 1460 aa6.34□□□□□ -1.4
LRIT3-202ENST00000594814 TDRD9Q8NDG6 1382 aaKnown RBP6.33□□□□□ -1.4
LRIT3-202ENST00000594814 ZNF608Q9ULD9 1512 aaPredicted RBP6.32□□□□□ -1.4
LRIT3-202ENST00000594814 RIMBP3CA6NJZ7 1639 aa6.32□□□□□ -1.4
LRIT3-202ENST00000594814 RIMBP3BA6NNM3 1639 aa6.32□□□□□ -1.4
LRIT3-202ENST00000594814 RIMBP3Q9UFD9 1639 aa6.32□□□□□ -1.4
LRIT3-202ENST00000594814 PDS5BQ9NTI5 1447 aa6.32□□□□□ -1.4
LRIT3-202ENST00000594814 RAPGEF2Q9Y4G8 1499 aa6.32□□□□□ -1.4
LRIT3-202ENST00000594814 FBLN2P98095 1184 aa6.32□□□□□ -1.4
LRIT3-202ENST00000594814 IGF1RP08069 1367 aa6.31□□□□□ -1.4
LRIT3-202ENST00000594814 AQRO60306 1485 aaKnown RBP eCLIP6.31□□□□□ -1.4
LRIT3-202ENST00000594814 ZNF316A6NFI3 1004 aaPredicted RBP6.31□□□□□ -1.4
LRIT3-202ENST00000594814 DNMBPQ6XZF7 1577 aa6.31□□□□□ -1.4
LRIT3-202ENST00000594814 PUS7Q96PZ0 661 aaKnown RBP6.3□□□□□ -1.4
LRIT3-202ENST00000594814 CHRM1P11229 460 aaPredicted RBP6.29□□□□□ -1.4
LRIT3-202ENST00000594814 TARBP1Q13395 1621 aaKnown RBP6.29□□□□□ -1.4
LRIT3-202ENST00000594814 RSPH6AQ9H0K4 717 aa6.29□□□□□ -1.4
LRIT3-202ENST00000594814 C14orf37Q86TY3 774 aa6.29□□□□□ -1.4
LRIT3-202ENST00000594814 ERCC6Q03468 1493 aa6.28□□□□□ -1.4
LRIT3-202ENST00000594814 MRC2Q9UBG0 1479 aa6.28□□□□□ -1.4
LRIT3-202ENST00000594814 BRD2P25440 801 aaKnown RBP6.26□□□□□ -1.41
LRIT3-202ENST00000594814 PRXQ9BXM0 1461 aa6.26□□□□□ -1.41
LRIT3-202ENST00000594814 TAF7LQ5H9L4 462 aa6.26□□□□□ -1.41
LRIT3-202ENST00000594814 ABCA10Q8WWZ4 1543 aa6.26□□□□□ -1.41
LRIT3-202ENST00000594814 NECTIN2Q92692 538 aa6.25□□□□□ -1.41
LRIT3-202ENST00000594814 CCER1Q8TC90 406 aaPredicted RBP6.24□□□□□ -1.41
LRIT3-202ENST00000594814 SLC4A1APQ9BWU0 796 aaKnown RBP6.24□□□□□ -1.41
LRIT3-202ENST00000594814 TSHZ2Q9NRE2 1034 aa6.23□□□□□ -1.41
LRIT3-202ENST00000594814 FANCIQ9NVI1 1328 aa6.23□□□□□ -1.41
LRIT3-202ENST00000594814 KIF27Q86VH2 1401 aa6.23□□□□□ -1.41
LRIT3-202ENST00000594814 RGS22Q8NE09 1264 aa6.23□□□□□ -1.41
LRIT3-202ENST00000594814 ABCA5Q8WWZ7 1642 aa6.23□□□□□ -1.41
LRIT3-202ENST00000594814 DHX37Q8IY37 1157 aaKnown RBP6.23□□□□□ -1.41
LRIT3-202ENST00000594814 PDE4CQ08493 712 aa6.22□□□□□ -1.41
LRIT3-202ENST00000594814 GAPVD1Q14C86 1478 aa6.22□□□□□ -1.41
LRIT3-202ENST00000594814 CARMIL1Q5VZK9 1371 aa6.21□□□□□ -1.41
LRIT3-202ENST00000594814 SUPT16HQ9Y5B9 1047 aaKnown RBP6.21□□□□□ -1.41
LRIT3-202ENST00000594814 CEP162Q5TB80 1403 aa6.2□□□□□ -1.42
LRIT3-202ENST00000594814 BCL11BQ9C0K0 894 aaPredicted RBP6.2□□□□□ -1.42
LRIT3-202ENST00000594814 TRHP20396 242 aaPredicted RBP6.2□□□□□ -1.42
LRIT3-202ENST00000594814 C1orf115Q9H7X2 142 aa6.2□□□□□ -1.42
LRIT3-202ENST00000594814 KIF21BO75037 1637 aa6.2□□□□□ -1.42
LRIT3-202ENST00000594814 P3H3Q8IVL6 736 aa6.19□□□□□ -1.42
LRIT3-202ENST00000594814 TNIKQ9UKE5 1360 aa6.19□□□□□ -1.42
LRIT3-202ENST00000594814 EIF4G3O43432 1585 aaKnown RBP6.19□□□□□ -1.42
LRIT3-202ENST00000594814 ERCC6L2Q5T890 1561 aa6.19□□□□□ -1.42
LRIT3-202ENST00000594814 ZNF692Q9BU19 519 aaPredicted RBP6.19□□□□□ -1.42
LRIT3-202ENST00000594814 GOLGA3Q08378 1498 aa6.18□□□□□ -1.42
LRIT3-202ENST00000594814 CLASP1Q7Z460 1538 aa6.18□□□□□ -1.42
LRIT3-202ENST00000594814 EEA1Q15075 1411 aa6.18□□□□□ -1.42
LRIT3-202ENST00000594814 AAMPQ13685 434 aa6.18□□□□□ -1.42
LRIT3-202ENST00000594814 PKNOX2Q96KN3 472 aa6.18□□□□□ -1.42
LRIT3-202ENST00000594814 ARAP1Q96P48 1450 aa6.17□□□□□ -1.42
LRIT3-202ENST00000594814 IFT140Q96RY7 1462 aa6.17□□□□□ -1.42
LRIT3-202ENST00000594814 SNAPC4Q5SXM2 1469 aa6.17□□□□□ -1.42
LRIT3-202ENST00000594814 PBRM1Q86U86 1689 aa6.16□□□□□ -1.42
LRIT3-202ENST00000594814 ARHGAP35Q9NRY4 1499 aa6.15□□□□□ -1.42
LRIT3-202ENST00000594814 ERICH3Q5RHP9 1530 aa6.14□□□□□ -1.43
LRIT3-202ENST00000594814 HAP1P54257 671 aaPredicted RBP6.14□□□□□ -1.43
LRIT3-202ENST00000594814 ANO8Q9HCE9 1232 aaPredicted RBP6.14□□□□□ -1.43
LRIT3-202ENST00000594814 GRIN2BQ13224 1484 aa6.13□□□□□ -1.43
LRIT3-202ENST00000594814 CLIP1P30622 1438 aa6.13□□□□□ -1.43
LRIT3-202ENST00000594814 ADAMTS12P58397 1594 aa6.13□□□□□ -1.43
LRIT3-202ENST00000594814 KANK4Q5T7N3 995 aaPredicted RBP6.13□□□□□ -1.43
LRIT3-202ENST00000594814 CEP170Q5SW79 1584 aa6.12□□□□□ -1.43
LRIT3-202ENST00000594814 IGSF5Q9NSI5 407 aa6.12□□□□□ -1.43
LRIT3-202ENST00000594814 FHAD1B1AJZ9 1412 aa6.11□□□□□ -1.43
LRIT3-202ENST00000594814 FHOD3Q2V2M9 1422 aa6.11□□□□□ -1.43
LRIT3-202ENST00000594814 ARHGEF11O15085 1522 aa6.11□□□□□ -1.43
LRIT3-202ENST00000594814 KIF13AQ9H1H9 1805 aa6.11□□□□□ -1.43
LRIT3-202ENST00000594814 ARID3CA6NKF2 412 aa6.1□□□□□ -1.43
LRIT3-202ENST00000594814 GRIN2AQ12879 1464 aa6.1□□□□□ -1.43
LRIT3-202ENST00000594814 YTHDC1Q96MU7 727 aaKnown RBP6.1□□□□□ -1.43
LRIT3-202ENST00000594814 BCCIPQ9P287 314 aaKnown RBP eCLIP6.1□□□□□ -1.43
LRIT3-202ENST00000594814 CDK11AQ9UQ88 783 aaPredicted RBP6.1□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 9.3 ms