RNA–Protein interactions for RNA: ENST00000593282.5

LINC01539-206, Transcript of long intergenic non-protein coding RNA 1539, humanhuman

TSL 4 BASIC

Gene LINC01539, Length 678 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01539-206ENST00000593282 CCDC61Q9Y6R9 512 aa11□□□□□ -0.65
LINC01539-206ENST00000593282 RASEFQ8IZ41 740 aa10.98□□□□□ -0.65
LINC01539-206ENST00000593282 FBXO3Q9UK99 471 aa10.96□□□□□ -0.65
LINC01539-206ENST00000593282 KIF12Q96FN5 646 aa10.94□□□□□ -0.66
LINC01539-206ENST00000593282 ASTLQ6HA08 431 aaPredicted RBP10.91□□□□□ -0.66
LINC01539-206ENST00000593282 MAP3K13O43283 966 aa10.9□□□□□ -0.66
LINC01539-206ENST00000593282 ATMINO43313 823 aaPredicted RBP10.9□□□□□ -0.66
LINC01539-206ENST00000593282 FAM212AQ96EL1 285 aa10.9□□□□□ -0.66
LINC01539-206ENST00000593282 PELP1Q8IZL8 1130 aaKnown RBP10.89□□□□□ -0.67
LINC01539-206ENST00000593282 SLC39A7Q92504 469 aa10.89□□□□□ -0.67
LINC01539-206ENST00000593282 METRNQ9UJH8 293 aa10.88□□□□□ -0.67
LINC01539-206ENST00000593282 NUBP1P53384 320 aa10.87□□□□□ -0.67
LINC01539-206ENST00000593282 C7P10643 843 aa10.85□□□□□ -0.67
LINC01539-206ENST00000593282 ATN1P54259 1190 aaPredicted RBP10.84□□□□□ -0.67
LINC01539-206ENST00000593282 PCDHB13Q9Y5F0 798 aa10.84□□□□□ -0.67
LINC01539-206ENST00000593282 TIE1P35590 1138 aa10.82□□□□□ -0.68
LINC01539-206ENST00000593282 KLHL34Q8N239 644 aa10.82□□□□□ -0.68
LINC01539-206ENST00000593282 BMP2KQ9NSY1 1161 aaPredicted RBP10.82□□□□□ -0.68
LINC01539-206ENST00000593282 TRPC6Q9Y210 931 aa10.82□□□□□ -0.68
LINC01539-206ENST00000593282 DCAF8Q5TAQ9 597 aa10.81□□□□□ -0.68
LINC01539-206ENST00000593282 POTEB2H3BUK9 544 aa10.8□□□□□ -0.68
LINC01539-206ENST00000593282 SGIP1Q9BQI5 828 aa10.79□□□□□ -0.68
LINC01539-206ENST00000593282 VASPP50552 380 aaPredicted RBP10.78□□□□□ -0.68
LINC01539-206ENST00000593282 OTUD5Q96G74 571 aa10.78□□□□□ -0.68
LINC01539-206ENST00000593282 TTLL13PA6NNM8 815 aa10.75□□□□□ -0.69
LINC01539-206ENST00000593282 SEC24BO95487 1268 aa10.73□□□□□ -0.69
LINC01539-206ENST00000593282 MAMSTRQ6ZN01 415 aa10.73□□□□□ -0.69
LINC01539-206ENST00000593282 IFNL1Q8IU54 200 aa10.73□□□□□ -0.69
LINC01539-206ENST00000593282 PYGBP11216 843 aa10.72□□□□□ -0.69
LINC01539-206ENST00000593282 TRIM35Q9UPQ4 493 aa10.71□□□□□ -0.69
LINC01539-206ENST00000593282 SCUBE2Q9NQ36 999 aa10.7□□□□□ -0.7
LINC01539-206ENST00000593282 TMEM106CQ9BVX2 250 aa10.69□□□□□ -0.7
LINC01539-206ENST00000593282 GSE1Q14687 1217 aa10.68□□□□□ -0.7
LINC01539-206ENST00000593282 IER5LQ5T953 404 aa10.65□□□□□ -0.7
LINC01539-206ENST00000593282 POTEJP0CG39 1038 aa10.64□□□□□ -0.71
LINC01539-206ENST00000593282 POTEFA5A3E0 1075 aa10.63□□□□□ -0.71
LINC01539-206ENST00000593282 COLQQ9Y215 455 aaPredicted RBP10.62□□□□□ -0.71
LINC01539-206ENST00000593282 PCDHB8Q9UN66 801 aa10.61□□□□□ -0.71
LINC01539-206ENST00000593282 PLCG2P16885 1265 aa10.6□□□□□ -0.71
LINC01539-206ENST00000593282 ZNF467Q7Z7K2 595 aaPredicted RBP10.58□□□□□ -0.72
LINC01539-206ENST00000593282 SPOCK2Q92563 424 aa10.58□□□□□ -0.72
LINC01539-206ENST00000593282 CIZ1Q9ULV3 898 aaPredicted RBP10.57□□□□□ -0.72
LINC01539-206ENST00000593282 GOLGA2Q08379 1002 aa10.55□□□□□ -0.72
LINC01539-206ENST00000593282 IFNLR1Q8IU57 520 aaPredicted RBP10.55□□□□□ -0.72
LINC01539-206ENST00000593282 POTEMA6NI47 508 aa10.53□□□□□ -0.72
LINC01539-206ENST00000593282 FAM163AQ96GL9 167 aaPredicted RBP10.51□□□□□ -0.73
LINC01539-206ENST00000593282 POTEGQ6S5H5 508 aa10.5□□□□□ -0.73
LINC01539-206ENST00000593282 CHRM1P11229 460 aaPredicted RBP10.49□□□□□ -0.73
LINC01539-206ENST00000593282 IRX5P78411 483 aaPredicted RBP10.49□□□□□ -0.73
LINC01539-206ENST00000593282 OCEL1Q9H607 264 aa10.49□□□□□ -0.73
LINC01539-206ENST00000593282 PLSCR2Q9NRY7 297 aa10.49□□□□□ -0.73
LINC01539-206ENST00000593282 MKRN3Q13064 507 aaKnown RBP10.48□□□□□ -0.73
LINC01539-206ENST00000593282 PSEN1P49768 467 aa10.47□□□□□ -0.73
LINC01539-206ENST00000593282 SLAIN1Q8ND83 568 aa10.46□□□□□ -0.73
LINC01539-206ENST00000593282 PDAP1Q13442 181 aaKnown RBP10.43□□□□□ -0.74
LINC01539-206ENST00000593282 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP10.39□□□□□ -0.75
LINC01539-206ENST00000593282 EIF2AK3Q9NZJ5 1116 aaKnown RBP10.39□□□□□ -0.75
LINC01539-206ENST00000593282 TRIM41Q8WV44 630 aa10.38□□□□□ -0.75
LINC01539-206ENST00000593282 LCE2DQ5TA82 110 aaPredicted RBP10.36□□□□□ -0.75
LINC01539-206ENST00000593282 C3orf67Q6ZVT6 689 aa10.36□□□□□ -0.75
LINC01539-206ENST00000593282 CABP2Q9NPB3 220 aa10.36□□□□□ -0.75
LINC01539-206ENST00000593282 L3MBTL3Q96JM7 780 aaPredicted RBP10.35□□□□□ -0.75
LINC01539-206ENST00000593282 PDCD7Q8N8D1 485 aaKnown RBP10.34□□□□□ -0.75
LINC01539-206ENST00000593282 PCDH10Q9P2E7 1040 aa10.34□□□□□ -0.75
LINC01539-206ENST00000593282 G3V3G9 751 aa10.32□□□□□ -0.76
LINC01539-206ENST00000593282 SNPHO15079 494 aa10.3□□□□□ -0.76
LINC01539-206ENST00000593282 ST18O60284 1047 aa10.28□□□□□ -0.76
LINC01539-206ENST00000593282 SLC24A1O60721 1099 aa10.28□□□□□ -0.76
LINC01539-206ENST00000593282 RIOK3O14730 519 aaKnown RBP10.23□□□□□ -0.77
LINC01539-206ENST00000593282 DPY19L2Q6NUT2 758 aa10.23□□□□□ -0.77
LINC01539-206ENST00000593282 EFCAB3Q8N7B9 438 aa10.22□□□□□ -0.77
LINC01539-206ENST00000593282 BOLA1Q9Y3E2 137 aa10.21□□□□□ -0.77
LINC01539-206ENST00000593282 ILDR1Q86SU0 546 aaPredicted RBP10.2□□□□□ -0.78
LINC01539-206ENST00000593282 CDAN1Q8IWY9 1227 aa10.2□□□□□ -0.78
LINC01539-206ENST00000593282 TMEM121BQ9BXQ6 578 aaPredicted RBP10.2□□□□□ -0.78
LINC01539-206ENST00000593282 VGFO15240 615 aaPredicted RBP10.19□□□□□ -0.78
LINC01539-206ENST00000593282 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP10.17□□□□□ -0.78
LINC01539-206ENST00000593282 ZFP91Q96JP5 570 aaPredicted RBP10.17□□□□□ -0.78
LINC01539-206ENST00000593282 RNF25Q96BH1 459 aaPredicted RBP10.16□□□□□ -0.78
LINC01539-206ENST00000593282 TAOK2Q9UL54 1235 aa10.16□□□□□ -0.78
LINC01539-206ENST00000593282 MARVELD3Q96A59 401 aa10.15□□□□□ -0.78
LINC01539-206ENST00000593282 SOX12O15370 315 aa10.12□□□□□ -0.79
LINC01539-206ENST00000593282 EMP3P54852 163 aa10.12□□□□□ -0.79
LINC01539-206ENST00000593282 ECM2O94769 699 aaPredicted RBP10.1□□□□□ -0.79
LINC01539-206ENST00000593282 ZNF710Q8N1W2 664 aa10.07□□□□□ -0.8
LINC01539-206ENST00000593282 BCL11BQ9C0K0 894 aaPredicted RBP10.07□□□□□ -0.8
LINC01539-206ENST00000593282 PHF8Q9UPP1 1060 aa10.07□□□□□ -0.8
LINC01539-206ENST00000593282 STK24Q9Y6E0 443 aa10.07□□□□□ -0.8
LINC01539-206ENST00000593282 MICALL2Q8IY33 904 aa10.06□□□□□ -0.8
LINC01539-206ENST00000593282 STK25O00506 426 aa10.04□□□□□ -0.8
LINC01539-206ENST00000593282 DOK7Q18PE1 504 aa10.04□□□□□ -0.8
LINC01539-206ENST00000593282 FAM205CA6NFA0 338 aa10.03□□□□□ -0.8
LINC01539-206ENST00000593282 NLRP6P59044 892 aa10.03□□□□□ -0.8
LINC01539-206ENST00000593282 RIMBP2O15034 1052 aa10.02□□□□□ -0.81
LINC01539-206ENST00000593282 MS4A4AQ96JQ5 239 aa10.02□□□□□ -0.81
LINC01539-206ENST00000593282 RTN4Q9NQC3 1192 aaKnown RBP10.01□□□□□ -0.81
LINC01539-206ENST00000593282 HS3ST6Q96QI5 342 aa10□□□□□ -0.81
LINC01539-206ENST00000593282 HOXB3P14651 431 aaPredicted RBP9.99□□□□□ -0.81
LINC01539-206ENST00000593282 RGL2O15211 777 aa9.96□□□□□ -0.82
LINC01539-206ENST00000593282 PKD2Q13563 968 aa9.96□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 8.6 ms