RNA–Protein interactions for RNA: ENST00000592426.5

TUBD1-214, Transcript of tubulin delta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TUBD1, Length 1,460 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBD1-214ENST00000592426 AMER1Q5JTC6 1135 aaPredicted RBP10.94□□□□□ -0.66
TUBD1-214ENST00000592426 SLC39A7Q92504 469 aa10.94□□□□□ -0.66
TUBD1-214ENST00000592426 OTUD5Q96G74 571 aa10.94□□□□□ -0.66
TUBD1-214ENST00000592426 PELP1Q8IZL8 1130 aaKnown RBP10.93□□□□□ -0.66
TUBD1-214ENST00000592426 C7P10643 843 aa10.93□□□□□ -0.66
TUBD1-214ENST00000592426 RTN4Q9NQC3 1192 aaKnown RBP10.93□□□□□ -0.66
TUBD1-214ENST00000592426 METRNQ9UJH8 293 aa10.93□□□□□ -0.66
TUBD1-214ENST00000592426 POTEB2H3BUK9 544 aa10.92□□□□□ -0.66
TUBD1-214ENST00000592426 KIF12Q96FN5 646 aa10.9□□□□□ -0.66
TUBD1-214ENST00000592426 MIER1Q8N108 512 aa10.89□□□□□ -0.67
TUBD1-214ENST00000592426 ZBTB47Q9UFB7 747 aaPredicted RBP10.87□□□□□ -0.67
TUBD1-214ENST00000592426 RASEFQ8IZ41 740 aa10.85□□□□□ -0.67
TUBD1-214ENST00000592426 MAMSTRQ6ZN01 415 aa10.84□□□□□ -0.67
TUBD1-214ENST00000592426 TIE1P35590 1138 aa10.83□□□□□ -0.68
TUBD1-214ENST00000592426 ATN1P54259 1190 aaPredicted RBP10.82□□□□□ -0.68
TUBD1-214ENST00000592426 PLCD3Q8N3E9 789 aa10.82□□□□□ -0.68
TUBD1-214ENST00000592426 BMP2KQ9NSY1 1161 aaPredicted RBP10.81□□□□□ -0.68
TUBD1-214ENST00000592426 MAP3K13O43283 966 aa10.81□□□□□ -0.68
TUBD1-214ENST00000592426 SGIP1Q9BQI5 828 aa10.81□□□□□ -0.68
TUBD1-214ENST00000592426 POTEJP0CG39 1038 aa10.75□□□□□ -0.69
TUBD1-214ENST00000592426 SCUBE2Q9NQ36 999 aa10.75□□□□□ -0.69
TUBD1-214ENST00000592426 TRPC6Q9Y210 931 aa10.74□□□□□ -0.69
TUBD1-214ENST00000592426 NUBP1P53384 320 aa10.74□□□□□ -0.69
TUBD1-214ENST00000592426 TTLL13PA6NNM8 815 aa10.73□□□□□ -0.69
TUBD1-214ENST00000592426 POTEMA6NI47 508 aa10.72□□□□□ -0.69
TUBD1-214ENST00000592426 FAM212AQ96EL1 285 aa10.72□□□□□ -0.69
TUBD1-214ENST00000592426 IER5LQ5T953 404 aa10.71□□□□□ -0.69
TUBD1-214ENST00000592426 PCDHB13Q9Y5F0 798 aa10.7□□□□□ -0.7
TUBD1-214ENST00000592426 POTEFA5A3E0 1075 aa10.69□□□□□ -0.7
TUBD1-214ENST00000592426 POTEGQ6S5H5 508 aa10.68□□□□□ -0.7
TUBD1-214ENST00000592426 PLSCR2Q9NRY7 297 aa10.68□□□□□ -0.7
TUBD1-214ENST00000592426 FBXO3Q9UK99 471 aa10.68□□□□□ -0.7
TUBD1-214ENST00000592426 PCDH10Q9P2E7 1040 aa10.65□□□□□ -0.7
TUBD1-214ENST00000592426 TRIM35Q9UPQ4 493 aa10.65□□□□□ -0.7
TUBD1-214ENST00000592426 SEC24BO95487 1268 aa10.64□□□□□ -0.71
TUBD1-214ENST00000592426 IFNL1Q8IU54 200 aa10.62□□□□□ -0.71
TUBD1-214ENST00000592426 COLQQ9Y215 455 aaPredicted RBP10.61□□□□□ -0.71
TUBD1-214ENST00000592426 SLC24A1O60721 1099 aa10.58□□□□□ -0.72
TUBD1-214ENST00000592426 LCE2DQ5TA82 110 aaPredicted RBP10.58□□□□□ -0.72
TUBD1-214ENST00000592426 TMEM106CQ9BVX2 250 aa10.57□□□□□ -0.72
TUBD1-214ENST00000592426 PLCG2P16885 1265 aa10.52□□□□□ -0.73
TUBD1-214ENST00000592426 FAM163AQ96GL9 167 aaPredicted RBP10.51□□□□□ -0.73
TUBD1-214ENST00000592426 VASPP50552 380 aaPredicted RBP10.5□□□□□ -0.73
TUBD1-214ENST00000592426 IRX5P78411 483 aaPredicted RBP10.5□□□□□ -0.73
TUBD1-214ENST00000592426 DCAF8Q5TAQ9 597 aa10.5□□□□□ -0.73
TUBD1-214ENST00000592426 PYGBP11216 843 aa10.49□□□□□ -0.73
TUBD1-214ENST00000592426 GSE1Q14687 1217 aa10.47□□□□□ -0.73
TUBD1-214ENST00000592426 ZNF467Q7Z7K2 595 aaPredicted RBP10.44□□□□□ -0.74
TUBD1-214ENST00000592426 SLAIN1Q8ND83 568 aa10.44□□□□□ -0.74
TUBD1-214ENST00000592426 OCEL1Q9H607 264 aa10.44□□□□□ -0.74
TUBD1-214ENST00000592426 KLHL34Q8N239 644 aa10.41□□□□□ -0.74
TUBD1-214ENST00000592426 PCDHB8Q9UN66 801 aa10.41□□□□□ -0.74
TUBD1-214ENST00000592426 CHRM1P11229 460 aaPredicted RBP10.4□□□□□ -0.74
TUBD1-214ENST00000592426 IFNLR1Q8IU57 520 aaPredicted RBP10.38□□□□□ -0.75
TUBD1-214ENST00000592426 TMEM121BQ9BXQ6 578 aaPredicted RBP10.35□□□□□ -0.75
TUBD1-214ENST00000592426 EIF2AK3Q9NZJ5 1116 aaKnown RBP10.35□□□□□ -0.75
TUBD1-214ENST00000592426 ST18O60284 1047 aa10.34□□□□□ -0.75
TUBD1-214ENST00000592426 SNPHO15079 494 aa10.33□□□□□ -0.76
TUBD1-214ENST00000592426 GOLGA2Q08379 1002 aa10.33□□□□□ -0.76
TUBD1-214ENST00000592426 PDCD7Q8N8D1 485 aaKnown RBP10.32□□□□□ -0.76
TUBD1-214ENST00000592426 MKRN3Q13064 507 aaKnown RBP10.31□□□□□ -0.76
TUBD1-214ENST00000592426 CDAN1Q8IWY9 1227 aa10.31□□□□□ -0.76
TUBD1-214ENST00000592426 PSEN1P49768 467 aa10.29□□□□□ -0.76
TUBD1-214ENST00000592426 L3MBTL3Q96JM7 780 aaPredicted RBP10.29□□□□□ -0.76
TUBD1-214ENST00000592426 C3orf67Q6ZVT6 689 aa10.28□□□□□ -0.76
TUBD1-214ENST00000592426 PDAP1Q13442 181 aaKnown RBP10.27□□□□□ -0.77
TUBD1-214ENST00000592426 SPOCK2Q92563 424 aa10.27□□□□□ -0.77
TUBD1-214ENST00000592426 ILDR1Q86SU0 546 aaPredicted RBP10.25□□□□□ -0.77
TUBD1-214ENST00000592426 DCAF8L2P0C7V8 631 aa10.23□□□□□ -0.77
TUBD1-214ENST00000592426 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP10.23□□□□□ -0.777e-6■■□□□ 12.8
TUBD1-214ENST00000592426 PKD2Q13563 968 aa10.19□□□□□ -0.78
TUBD1-214ENST00000592426 TRIM41Q8WV44 630 aa10.19□□□□□ -0.78
TUBD1-214ENST00000592426 CIZ1Q9ULV3 898 aaPredicted RBP10.18□□□□□ -0.78
TUBD1-214ENST00000592426 CABP2Q9NPB3 220 aa10.15□□□□□ -0.78
TUBD1-214ENST00000592426 G3V3G9 751 aa10.12□□□□□ -0.79
TUBD1-214ENST00000592426 MARVELD3Q96A59 401 aa10.12□□□□□ -0.79
TUBD1-214ENST00000592426 BOLA1Q9Y3E2 137 aa10.11□□□□□ -0.79
TUBD1-214ENST00000592426 EMP3P54852 163 aa10.1□□□□□ -0.79
TUBD1-214ENST00000592426 ECM2O94769 699 aaPredicted RBP10.1□□□□□ -0.79
TUBD1-214ENST00000592426 PLCB2Q00722 1185 aa10.1□□□□□ -0.79
TUBD1-214ENST00000592426 SPNS2Q8IVW8 549 aa10.08□□□□□ -0.8
TUBD1-214ENST00000592426 DPY19L2Q6NUT2 758 aa10.07□□□□□ -0.8
TUBD1-214ENST00000592426 MMRN1Q13201 1228 aa10.06□□□□□ -0.8
TUBD1-214ENST00000592426 HS3ST6Q96QI5 342 aa10.03□□□□□ -0.8
TUBD1-214ENST00000592426 HOXB3P14651 431 aaPredicted RBP10.01□□□□□ -0.81
TUBD1-214ENST00000592426 HAP1P54257 671 aaPredicted RBP10□□□□□ -0.81
TUBD1-214ENST00000592426 DOK7Q18PE1 504 aa10□□□□□ -0.81
TUBD1-214ENST00000592426 EFCAB3Q8N7B9 438 aa10□□□□□ -0.81
TUBD1-214ENST00000592426 FAM205CA6NFA0 338 aa9.98□□□□□ -0.81
TUBD1-214ENST00000592426 RIOK3O14730 519 aaKnown RBP9.98□□□□□ -0.81
TUBD1-214ENST00000592426 KRTAP3-3Q9BYR6 98 aa9.98□□□□□ -0.81
TUBD1-214ENST00000592426 KRTAP3-2Q9BYR7 98 aa9.98□□□□□ -0.81
TUBD1-214ENST00000592426 HOXB1P14653 301 aaPredicted RBP9.98□□□□□ -0.81
TUBD1-214ENST00000592426 SOX12O15370 315 aa9.97□□□□□ -0.81
TUBD1-214ENST00000592426 ZNF710Q8N1W2 664 aa9.97□□□□□ -0.81
TUBD1-214ENST00000592426 POTEB3A0JP26 581 aa9.96□□□□□ -0.82
TUBD1-214ENST00000592426 RIMBP2O15034 1052 aa9.96□□□□□ -0.82
TUBD1-214ENST00000592426 RGL2O15211 777 aa9.96□□□□□ -0.82
TUBD1-214ENST00000592426 VGFO15240 615 aaPredicted RBP9.96□□□□□ -0.82
TUBD1-214ENST00000592426 POTEBQ6S5H4 581 aa9.96□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms