RNA–Protein interactions for RNA: ENST00000589759.1

ATP6V0A1-223, Transcript of ATPase H+ transporting V0 subunit a1, human

TSL 3

Gene ATP6V0A1, Length 502 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ATP6V0A1-223	ENST00000589759	DCAF8L2	P0C7V8	631 aa		7.62	□□□□□ -1.19
ATP6V0A1-223	ENST00000589759	SPDYE6	P0CI01	402 aa		7.62	□□□□□ -1.19
ATP6V0A1-223	ENST00000589759	SPDYE2	Q495Y8	402 aa		7.62	□□□□□ -1.19
ATP6V0A1-223	ENST00000589759	SUPT16H	Q9Y5B9	1047 aa	Known RBP	7.62	□□□□□ -1.19
ATP6V0A1-223	ENST00000589759	SHROOM4	Q9ULL8	1493 aa		7.62	□□□□□ -1.19
ATP6V0A1-223	ENST00000589759	LOC105371045	A0A1W2PR82	267 aa		7.6	□□□□□ -1.19
ATP6V0A1-223	ENST00000589759	ERICH6B	Q5W0A0	696 aa		7.6	□□□□□ -1.19
ATP6V0A1-223	ENST00000589759	DAXX	Q9UER7	740 aa	Predicted RBP	7.59	□□□□□ -1.19
ATP6V0A1-223	ENST00000589759	ZNF316	A6NFI3	1004 aa	Predicted RBP	7.58	□□□□□ -1.2
ATP6V0A1-223	ENST00000589759	OTUD5	Q96G74	571 aa		7.56	□□□□□ -1.2
ATP6V0A1-223	ENST00000589759	EIF5B	O60841	1220 aa	Known RBP	7.55	□□□□□ -1.2
ATP6V0A1-223	ENST00000589759	CD44	P16070	742 aa	Known RBP	7.55	□□□□□ -1.2
ATP6V0A1-223	ENST00000589759	CHADL	Q6NUI6	762 aa		7.55	□□□□□ -1.2
ATP6V0A1-223	ENST00000589759	YTHDC1	Q96MU7	727 aa	Known RBP	7.54	□□□□□ -1.2
ATP6V0A1-223	ENST00000589759	ANO8	Q9HCE9	1232 aa	Predicted RBP	7.54	□□□□□ -1.2
ATP6V0A1-223	ENST00000589759	UNC13A	Q9UPW8	1703 aa		7.54	□□□□□ -1.2
ATP6V0A1-223	ENST00000589759	PABPN1	Q86U42	306 aa	Known RBP eCLIP	7.53	□□□□□ -1.2
ATP6V0A1-223	ENST00000589759	CCER1	Q8TC90	406 aa	Predicted RBP	7.53	□□□□□ -1.2
ATP6V0A1-223	ENST00000589759	ATF5	Q9Y2D1	282 aa	Predicted RBP	7.53	□□□□□ -1.2
ATP6V0A1-223	ENST00000589759	KCNA4	P22459	653 aa		7.51	□□□□□ -1.21
ATP6V0A1-223	ENST00000589759	ZCCHC6	Q5VYS8	1495 aa	Known RBP	7.49	□□□□□ -1.21
ATP6V0A1-223	ENST00000589759	PRR29	P0C7W0	189 aa		7.49	□□□□□ -1.21
ATP6V0A1-223	ENST00000589759	MIER1	Q8N108	512 aa		7.49	□□□□□ -1.21
ATP6V0A1-223	ENST00000589759	FBLN2	P98095	1184 aa		7.47	□□□□□ -1.21
ATP6V0A1-223	ENST00000589759	FANCI	Q9NVI1	1328 aa		7.47	□□□□□ -1.21
ATP6V0A1-223	ENST00000589759	BICRA	Q9NZM4	1560 aa		7.46	□□□□□ -1.21
ATP6V0A1-223	ENST00000589759	RBM19	Q9Y4C8	960 aa	Known RBP	7.45	□□□□□ -1.22
ATP6V0A1-223	ENST00000589759	DEK	P35659	375 aa	Known RBP	7.44	□□□□□ -1.22
ATP6V0A1-223	ENST00000589759	ZNF692	Q9BU19	519 aa	Predicted RBP	7.43	□□□□□ -1.22
ATP6V0A1-223	ENST00000589759	SALL2	Q9Y467	1007 aa	Predicted RBP	7.43	□□□□□ -1.22
ATP6V0A1-223	ENST00000589759	POTEB2	H3BUK9	544 aa		7.4	□□□□□ -1.22
ATP6V0A1-223	ENST00000589759	PKNOX2	Q96KN3	472 aa		7.4	□□□□□ -1.22
ATP6V0A1-223	ENST00000589759	FARP1	Q9Y4F1	1045 aa	Predicted RBP	7.4	□□□□□ -1.22
ATP6V0A1-223	ENST00000589759	FAM163A	Q96GL9	167 aa	Predicted RBP	7.38	□□□□□ -1.23
ATP6V0A1-223	ENST00000589759	SCRIB	Q14160	1630 aa		7.38	□□□□□ -1.23
ATP6V0A1-223	ENST00000589759	MAMSTR	Q6ZN01	415 aa		7.36	□□□□□ -1.23
ATP6V0A1-223	ENST00000589759	ZNF579	Q8NAF0	562 aa	Known RBP	7.36	□□□□□ -1.23
ATP6V0A1-223	ENST00000589759	SSUH2	Q9Y2M2	353 aa		7.36	□□□□□ -1.23
ATP6V0A1-223	ENST00000589759	WRN	Q14191	1432 aa	Predicted RBP eCLIP	7.35	□□□□□ -1.23
ATP6V0A1-223	ENST00000589759	ZRANB1	Q9UGI0	708 aa		7.35	□□□□□ -1.23
ATP6V0A1-223	ENST00000589759	CCDC136	Q96JN2	1154 aa		7.32	□□□□□ -1.24
ATP6V0A1-223	ENST00000589759	GALR2	O43603	387 aa	Predicted RBP	7.3	□□□□□ -1.24
ATP6V0A1-223	ENST00000589759	FOXD4L1	Q9NU39	408 aa		7.3	□□□□□ -1.24
ATP6V0A1-223	ENST00000589759	PODXL2	Q9NZ53	605 aa		7.3	□□□□□ -1.24
ATP6V0A1-223	ENST00000589759	CC2D2A	Q9P2K1	1620 aa		7.3	□□□□□ -1.24
ATP6V0A1-223	ENST00000589759	EIF4G1	Q04637	1599 aa	Known RBP	7.28	□□□□□ -1.24
ATP6V0A1-223	ENST00000589759	NEFL	P07196	543 aa		7.27	□□□□□ -1.25
ATP6V0A1-223	ENST00000589759	FKBP8	Q14318	412 aa		7.27	□□□□□ -1.25
ATP6V0A1-223	ENST00000589759	SCUBE2	Q9NQ36	999 aa		7.27	□□□□□ -1.25
ATP6V0A1-223	ENST00000589759	CECR2	Q9BXF3	1484 aa		7.27	□□□□□ -1.25
ATP6V0A1-223	ENST00000589759	PLEKHG5	O94827	1062 aa		7.26	□□□□□ -1.25
ATP6V0A1-223	ENST00000589759	CDAN1	Q8IWY9	1227 aa		7.26	□□□□□ -1.25
ATP6V0A1-223	ENST00000589759	C11orf95	C9JLR9	678 aa	Predicted RBP	7.24	□□□□□ -1.25
ATP6V0A1-223	ENST00000589759	LCE2D	Q5TA82	110 aa	Predicted RBP	7.24	□□□□□ -1.25
ATP6V0A1-223	ENST00000589759	BCAN	Q96GW7	911 aa		7.24	□□□□□ -1.25
ATP6V0A1-223	ENST00000589759	ZBTB4	Q9P1Z0	1013 aa	Predicted RBP	7.24	□□□□□ -1.25
ATP6V0A1-223	ENST00000589759	PAK3	O75914	559 aa	Predicted RBP	7.23	□□□□□ -1.25
ATP6V0A1-223	ENST00000589759	GLIPR1L2	Q4G1C9	344 aa		7.23	□□□□□ -1.25
ATP6V0A1-223	ENST00000589759	C7	P10643	843 aa		7.22	□□□□□ -1.25
ATP6V0A1-223	ENST00000589759	IL27	Q8NEV9	243 aa		7.22	□□□□□ -1.25
ATP6V0A1-223	ENST00000589759	SLC39A7	Q92504	469 aa		7.22	□□□□□ -1.25
ATP6V0A1-223	ENST00000589759	METRN	Q9UJH8	293 aa		7.22	□□□□□ -1.25
ATP6V0A1-223	ENST00000589759	CDK11A	Q9UQ88	783 aa	Predicted RBP	7.21	□□□□□ -1.26
ATP6V0A1-223	ENST00000589759	NOP58	Q9Y2X3	529 aa	Known RBP	7.21	□□□□□ -1.26
ATP6V0A1-223	ENST00000589759	RTL5	Q5HYW3	569 aa	Predicted RBP	7.19	□□□□□ -1.26
ATP6V0A1-223	ENST00000589759	WASHC2A	Q641Q2	1341 aa		7.19	□□□□□ -1.26
ATP6V0A1-223	ENST00000589759	RSPH6A	Q9H0K4	717 aa		7.18	□□□□□ -1.26
ATP6V0A1-223	ENST00000589759	WASHC2C	Q9Y4E1	1318 aa		7.17	□□□□□ -1.26
ATP6V0A1-223	ENST00000589759	ATXN8OS	P0DMR3	200 aa		7.16	□□□□□ -1.26
ATP6V0A1-223	ENST00000589759	POTEJ	P0CG39	1038 aa		7.15	□□□□□ -1.26
ATP6V0A1-223	ENST00000589759	MKRN4P	Q13434	485 aa	Predicted RBP	7.15	□□□□□ -1.26
ATP6V0A1-223	ENST00000589759	MMRN1	Q13201	1228 aa		7.14	□□□□□ -1.27
ATP6V0A1-223	ENST00000589759	ITGAE	P38570	1179 aa		7.13	□□□□□ -1.27
ATP6V0A1-223	ENST00000589759	RTN4	Q9NQC3	1192 aa	Known RBP	7.13	□□□□□ -1.27
ATP6V0A1-223	ENST00000589759	USP35	Q9P2H5	1018 aa		7.13	□□□□□ -1.27
ATP6V0A1-223	ENST00000589759	NBR1	Q14596	966 aa		7.12	□□□□□ -1.27
ATP6V0A1-223	ENST00000589759	ASTL	Q6HA08	431 aa	Predicted RBP	7.12	□□□□□ -1.27
ATP6V0A1-223	ENST00000589759	ZMYND15	Q9H091	742 aa		7.12	□□□□□ -1.27
ATP6V0A1-223	ENST00000589759	EEA1	Q15075	1411 aa		7.11	□□□□□ -1.27
ATP6V0A1-223	ENST00000589759	PHF12	Q96QT6	1004 aa		7.11	□□□□□ -1.27
ATP6V0A1-223	ENST00000589759	CEP162	Q5TB80	1403 aa		7.1	□□□□□ -1.27
ATP6V0A1-223	ENST00000589759	CCER2	I3L3R5	266 aa		7.09	□□□□□ -1.27
ATP6V0A1-223	ENST00000589759	ATMIN	O43313	823 aa	Predicted RBP	7.08	□□□□□ -1.28
ATP6V0A1-223	ENST00000589759	FAM43A	Q8N2R8	423 aa		7.08	□□□□□ -1.28
ATP6V0A1-223	ENST00000589759	SPNS2	Q8IVW8	549 aa		7.07	□□□□□ -1.28
ATP6V0A1-223	ENST00000589759	IPO9	Q96P70	1041 aa	Known RBP	7.07	□□□□□ -1.28
ATP6V0A1-223	ENST00000589759	PPP4R2	Q9NY27	417 aa		7.07	□□□□□ -1.28
ATP6V0A1-223	ENST00000589759	VSIG10	Q8N0Z9	540 aa		7.06	□□□□□ -1.28
ATP6V0A1-223	ENST00000589759	DHX57	Q6P158	1386 aa	Known RBP	7.06	□□□□□ -1.28
ATP6V0A1-223	ENST00000589759	TNIK	Q9UKE5	1360 aa		7.06	□□□□□ -1.28
ATP6V0A1-223	ENST00000589759	PEG3	Q9GZU2	1588 aa		7.05	□□□□□ -1.28
ATP6V0A1-223	ENST00000589759	ANP32A	P39687	249 aa	Known RBP	7.05	□□□□□ -1.28
ATP6V0A1-223	ENST00000589759	NCAPD3	P42695	1498 aa		7.04	□□□□□ -1.28
ATP6V0A1-223	ENST00000589759	FGD1	P98174	961 aa		7.04	□□□□□ -1.28
ATP6V0A1-223	ENST00000589759	PDE4C	Q08493	712 aa		7.04	□□□□□ -1.28
ATP6V0A1-223	ENST00000589759	AAMP	Q13685	434 aa		7.04	□□□□□ -1.28
ATP6V0A1-223	ENST00000589759	KCNH8	Q96L42	1107 aa		7.04	□□□□□ -1.28
ATP6V0A1-223	ENST00000589759	RSF1	Q96T23	1441 aa	Predicted RBP	7.03	□□□□□ -1.28
ATP6V0A1-223	ENST00000589759	SMARCA4	P51532	1647 aa		7.03	□□□□□ -1.28
ATP6V0A1-223	ENST00000589759	RRP9	O43818	475 aa	Known RBP	7.03	□□□□□ -1.28

Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms