RNA–Protein interactions for RNA: ENST00000589104.5

KDM4B-208, Transcript of lysine demethylase 4B, humanhuman

TSL 2

Gene KDM4B, Length 3,470 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM4B-208ENST00000589104 CADPSQ9ULU8 1353 aa20.16■□□□□ 0.82
KDM4B-208ENST00000589104 THOC2Q8NI27 1593 aaKnown RBP20.14■□□□□ 0.81
KDM4B-208ENST00000589104 SNAPC4Q5SXM2 1469 aa20.13■□□□□ 0.81
KDM4B-208ENST00000589104 KANK4Q5T7N3 995 aaPredicted RBP20.13■□□□□ 0.81
KDM4B-208ENST00000589104 ARHGEF11O15085 1522 aa20.13■□□□□ 0.81
KDM4B-208ENST00000589104 FYCO1Q9BQS8 1478 aa20.12■□□□□ 0.81
KDM4B-208ENST00000589104 CCNB3Q8WWL7 1395 aa20.09■□□□□ 0.81
KDM4B-208ENST00000589104 KDM5BQ9UGL1 1544 aa20.07■□□□□ 0.8
KDM4B-208ENST00000589104 TOPBP1Q92547 1522 aa20.04■□□□□ 0.8
KDM4B-208ENST00000589104 LAMC3Q9Y6N6 1575 aa20.04■□□□□ 0.8
KDM4B-208ENST00000589104 POLA1P09884 1462 aaPredicted RBP20.01■□□□□ 0.79
KDM4B-208ENST00000589104 CASKIN1Q8WXD9 1431 aa20.01■□□□□ 0.79
KDM4B-208ENST00000589104 GTF3C3Q9Y5Q9 886 aa20■□□□□ 0.79
KDM4B-208ENST00000589104 TARBP1Q13395 1621 aaKnown RBP19.99■□□□□ 0.79
KDM4B-208ENST00000589104 MIER1Q8N108 512 aa19.99■□□□□ 0.79
KDM4B-208ENST00000589104 GCC2Q8IWJ2 1684 aa19.99■□□□□ 0.79
KDM4B-208ENST00000589104 FANCD2Q9BXW9 1451 aa19.98■□□□□ 0.79
KDM4B-208ENST00000589104 CENPBP07199 599 aaPredicted RBP19.98■□□□□ 0.79
KDM4B-208ENST00000589104 PHLDB1Q86UU1 1377 aa19.96■□□□□ 0.79
KDM4B-208ENST00000589104 FHAD1B1AJZ9 1412 aa19.95■□□□□ 0.78
KDM4B-208ENST00000589104 GRIN2BQ13224 1484 aa19.95■□□□□ 0.78
KDM4B-208ENST00000589104 CARMIL1Q5VZK9 1371 aa19.94■□□□□ 0.78
KDM4B-208ENST00000589104 URB2Q14146 1524 aaKnown RBP19.91■□□□□ 0.78
KDM4B-208ENST00000589104 RAB3GAP2Q9H2M9 1393 aa19.9■□□□□ 0.78
KDM4B-208ENST00000589104 PBRM1Q86U86 1689 aa19.89■□□□□ 0.78
KDM4B-208ENST00000589104 PTPN23Q9H3S7 1636 aa19.89■□□□□ 0.78
KDM4B-208ENST00000589104 HECW1Q76N89 1606 aa19.88■□□□□ 0.77
KDM4B-208ENST00000589104 HNRNPUL2Q1KMD3 747 aaKnown RBP19.87■□□□□ 0.77
KDM4B-208ENST00000589104 SETD5Q9C0A6 1442 aa19.87■□□□□ 0.77
KDM4B-208ENST00000589104 TCOF1Q13428 1488 aaKnown RBP19.86■□□□□ 0.77
KDM4B-208ENST00000589104 UGGT2Q9NYU1 1516 aa19.85■□□□□ 0.77
KDM4B-208ENST00000589104 POLR1AO95602 1720 aaPredicted RBP19.84■□□□□ 0.77
KDM4B-208ENST00000589104 DENND4BO75064 1496 aaPredicted RBP19.84■□□□□ 0.77
KDM4B-208ENST00000589104 MAGI3Q5TCQ9 1506 aa19.82■□□□□ 0.76
KDM4B-208ENST00000589104 TTBK1Q5TCY1 1321 aaPredicted RBP19.81■□□□□ 0.76
KDM4B-208ENST00000589104 SUPT6HQ7KZ85 1726 aaKnown RBP19.81■□□□□ 0.76
KDM4B-208ENST00000589104 RAD54L2Q9Y4B4 1467 aa19.8■□□□□ 0.76
KDM4B-208ENST00000589104 EHBP1L1Q8N3D4 1523 aa19.78■□□□□ 0.76
KDM4B-208ENST00000589104 HFM1A2PYH4 1435 aa19.78■□□□□ 0.76
KDM4B-208ENST00000589104 AKNAQ7Z591 1439 aa19.77■□□□□ 0.76
KDM4B-208ENST00000589104 PTPRKQ15262 1439 aa19.75■□□□□ 0.75
KDM4B-208ENST00000589104 TIMELESSQ9UNS1 1208 aa19.75■□□□□ 0.75
KDM4B-208ENST00000589104 ADAMTS12P58397 1594 aa19.74■□□□□ 0.75
KDM4B-208ENST00000589104 FGD6Q6ZV73 1430 aa19.74■□□□□ 0.75
KDM4B-208ENST00000589104 NESP48681 1621 aa19.71■□□□□ 0.75
KDM4B-208ENST00000589104 FMN1Q68DA7 1419 aa19.7■□□□□ 0.74
KDM4B-208ENST00000589104 FHOD3Q2V2M9 1422 aa19.69■□□□□ 0.74
KDM4B-208ENST00000589104 APLP2Q06481 763 aa19.68■□□□□ 0.74
KDM4B-208ENST00000589104 WDR62O43379 1518 aa19.67■□□□□ 0.74
KDM4B-208ENST00000589104 UACAQ9BZF9 1416 aa19.65■□□□□ 0.74
KDM4B-208ENST00000589104 KDM6BO15054 1643 aa19.64■□□□□ 0.73
KDM4B-208ENST00000589104 NAIPQ13075 1403 aa19.64■□□□□ 0.73
KDM4B-208ENST00000589104 PPP1R15AO75807 674 aaPredicted RBP19.63■□□□□ 0.73
KDM4B-208ENST00000589104 CCDC18Q5T9S5 1454 aa19.63■□□□□ 0.73
KDM4B-208ENST00000589104 ADCY10Q96PN6 1610 aa19.63■□□□□ 0.73
KDM4B-208ENST00000589104 CROCC2H7BZ55 1655 aa19.61■□□□□ 0.73
KDM4B-208ENST00000589104 BCL11AQ9H165 835 aa19.61■□□□□ 0.73
KDM4B-208ENST00000589104 NCOA2Q15596 1464 aa19.61■□□□□ 0.73
KDM4B-208ENST00000589104 MYOM3Q5VTT5 1437 aa19.61■□□□□ 0.73
KDM4B-208ENST00000589104 GAPVD1Q14C86 1478 aa19.58■□□□□ 0.72
KDM4B-208ENST00000589104 IQGAP2Q13576 1575 aa19.56■□□□□ 0.72
KDM4B-208ENST00000589104 DNMT1P26358 1616 aaKnown RBP19.56■□□□□ 0.72
KDM4B-208ENST00000589104 SUPT16HQ9Y5B9 1047 aaKnown RBP19.52■□□□□ 0.71
KDM4B-208ENST00000589104 ADGBQ8N7X0 1667 aa19.51■□□□□ 0.71
KDM4B-208ENST00000589104 YTHDC1Q96MU7 727 aaKnown RBP19.49■□□□□ 0.71
KDM4B-208ENST00000589104 KIAA0556O60303 1618 aa19.49■□□□□ 0.71
KDM4B-208ENST00000589104 MIA2Q96PC5 1412 aa19.48■□□□□ 0.71
KDM4B-208ENST00000589104 EPRSP07814 1512 aaKnown RBP19.47■□□□□ 0.71
KDM4B-208ENST00000589104 MBD5Q9P267 1494 aa19.44■□□□□ 0.7
KDM4B-208ENST00000589104 DISP1Q96F81 1524 aa19.44■□□□□ 0.7
KDM4B-208ENST00000589104 TEX14Q8IWB6 1497 aa19.42■□□□□ 0.7
KDM4B-208ENST00000589104 CCER2I3L3R5 266 aa19.4■□□□□ 0.7
KDM4B-208ENST00000589104 PDS5BQ9NTI5 1447 aa19.4■□□□□ 0.7
KDM4B-208ENST00000589104 ROCK1Q13464 1354 aa19.38■□□□□ 0.69
KDM4B-208ENST00000589104 RAPGEF6Q8TEU7 1601 aa19.38■□□□□ 0.69
KDM4B-208ENST00000589104 ITSN2Q9NZM3 1697 aa19.37■□□□□ 0.69
KDM4B-208ENST00000589104 SPATA31E1Q6ZUB1 1445 aa19.36■□□□□ 0.69
KDM4B-208ENST00000589104 ADGRL2O95490 1459 aa19.34■□□□□ 0.69
KDM4B-208ENST00000589104 E9PCH4 1651 aa19.33■□□□□ 0.69
KDM4B-208ENST00000589104 CDC42BPAQ5VT25 1732 aa19.33■□□□□ 0.69
KDM4B-208ENST00000589104 KDM5DQ9BY66 1539 aa19.33■□□□□ 0.68
KDM4B-208ENST00000589104 KCNH8Q96L42 1107 aa19.33■□□□□ 0.68
KDM4B-208ENST00000589104 MRC2Q9UBG0 1479 aa19.32■□□□□ 0.68
KDM4B-208ENST00000589104 EIF4G3O43432 1585 aaKnown RBP19.31■□□□□ 0.68
KDM4B-208ENST00000589104 NUP153P49790 1475 aaKnown RBP19.31■□□□□ 0.68
KDM4B-208ENST00000589104 RANGAP1P46060 587 aaPredicted RBP19.31■□□□□ 0.68
KDM4B-208ENST00000589104 SIN3AQ96ST3 1273 aa19.3■□□□□ 0.68
KDM4B-208ENST00000589104 RPRD2Q5VT52 1461 aaKnown RBP19.3■□□□□ 0.68
KDM4B-208ENST00000589104 CDK13Q14004 1512 aaKnown RBP19.3■□□□□ 0.68
KDM4B-208ENST00000589104 NCOA1Q15788 1441 aa19.27■□□□□ 0.68
KDM4B-208ENST00000589104 KIF14Q15058 1648 aa19.27■□□□□ 0.68
KDM4B-208ENST00000589104 KIAA0586Q9BVV6 1533 aa19.26■□□□□ 0.67
KDM4B-208ENST00000589104 TSHZ2Q9NRE2 1034 aa19.26■□□□□ 0.67
KDM4B-208ENST00000589104 CEP170Q5SW79 1584 aa19.25■□□□□ 0.67
KDM4B-208ENST00000589104 PRKCSHP14314 528 aaPredicted RBP19.25■□□□□ 0.67
KDM4B-208ENST00000589104 IFT140Q96RY7 1462 aa19.25■□□□□ 0.67
KDM4B-208ENST00000589104 DAPK1P53355 1430 aa19.24■□□□□ 0.67
KDM4B-208ENST00000589104 TDRD9Q8NDG6 1382 aaKnown RBP19.24■□□□□ 0.67
KDM4B-208ENST00000589104 PZPP20742 1482 aa19.24■□□□□ 0.67
KDM4B-208ENST00000589104 BCORL1Q5H9F3 1711 aa19.23■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms