RNA–Protein interactions for RNA: ENST00000588074.1

LINC01538-201, Transcript of long intergenic non-protein coding RNA 1538, humanhuman

TSL 1 (best) BASIC

Gene LINC01538, Length 2,408 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01538-201ENST00000588074 GTPBP6O43824 516 aaPredicted RBP8.89□□□□□ -0.99
LINC01538-201ENST00000588074 FAM9AQ8IZU1 332 aaPredicted RBP8.89□□□□□ -0.99
LINC01538-201ENST00000588074 LMOD2Q6P5Q4 547 aa8.89□□□□□ -0.99
LINC01538-201ENST00000588074 DHX30Q7L2E3 1194 aaKnown RBP eCLIP8.86□□□□□ -0.99
LINC01538-201ENST00000588074 PLCD3Q8N3E9 789 aa8.85□□□□□ -0.99
LINC01538-201ENST00000588074 NEUROD2Q15784 382 aa8.84□□□□□ -0.99
LINC01538-201ENST00000588074 CENPBP07199 599 aaPredicted RBP8.81□□□□□ -1
LINC01538-201ENST00000588074 ARID3AQ99856 593 aa8.79□□□□□ -1
LINC01538-201ENST00000588074 KCNV2Q8TDN2 545 aa8.78□□□□□ -1
LINC01538-201ENST00000588074 NISCHQ9Y2I1 1504 aa8.78□□□□□ -1
LINC01538-201ENST00000588074 SLC24A3Q9HC58 644 aa8.77□□□□□ -1.01
LINC01538-201ENST00000588074 MIER1Q8N108 512 aa8.76□□□□□ -1.01
LINC01538-201ENST00000588074 C1orf115Q9H7X2 142 aa8.75□□□□□ -1.01
LINC01538-201ENST00000588074 POLA2Q14181 598 aa8.75□□□□□ -1.01
LINC01538-201ENST00000588074 EIF5BO60841 1220 aaKnown RBP8.74□□□□□ -1.01
LINC01538-201ENST00000588074 ZC3H15Q8WU90 426 aaKnown RBP8.74□□□□□ -1.01
LINC01538-201ENST00000588074 ZMYND15Q9H091 742 aa8.7□□□□□ -1.02
LINC01538-201ENST00000588074 STAG3Q9UJ98 1225 aa8.7□□□□□ -1.02
LINC01538-201ENST00000588074 P3H3Q8IVL6 736 aa8.7□□□□□ -1.02
LINC01538-201ENST00000588074 CADPS2Q86UW7 1296 aa8.67□□□□□ -1.02
LINC01538-201ENST00000588074 STK25O00506 426 aa8.66□□□□□ -1.02
LINC01538-201ENST00000588074 RSPH6AQ9H0K4 717 aa8.66□□□□□ -1.02
LINC01538-201ENST00000588074 SPINK5Q9NQ38 1064 aaPredicted RBP8.66□□□□□ -1.02
LINC01538-201ENST00000588074 ARID3CA6NKF2 412 aa8.64□□□□□ -1.03
LINC01538-201ENST00000588074 TRIM41Q8WV44 630 aa8.63□□□□□ -1.03
LINC01538-201ENST00000588074 NECTIN2Q92692 538 aa8.63□□□□□ -1.03
LINC01538-201ENST00000588074 RIOK3O14730 519 aaKnown RBP8.62□□□□□ -1.03
LINC01538-201ENST00000588074 GPBP1L1Q9HC44 474 aaPredicted RBP8.61□□□□□ -1.03
LINC01538-201ENST00000588074 PPARGC1BQ86YN6 1023 aaKnown RBP8.6□□□□□ -1.03
LINC01538-201ENST00000588074 ANP32EQ9BTT0 268 aa8.58□□□□□ -1.04
LINC01538-201ENST00000588074 ACIN1Q9UKV3 1341 aaKnown RBP8.58□□□□□ -1.04
LINC01538-201ENST00000588074 LOC105371045A0A1W2PR82 267 aa8.58□□□□□ -1.04
LINC01538-201ENST00000588074 ZNF692Q9BU19 519 aaPredicted RBP8.58□□□□□ -1.04
LINC01538-201ENST00000588074 SEMA3EO15041 775 aa8.56□□□□□ -1.04
LINC01538-201ENST00000588074 IL27Q8NEV9 243 aa8.56□□□□□ -1.04
LINC01538-201ENST00000588074 BCL11BQ9C0K0 894 aaPredicted RBP8.55□□□□□ -1.04
LINC01538-201ENST00000588074 PABPN1Q86U42 306 aaKnown RBP eCLIP8.54□□□□□ -1.04
LINC01538-201ENST00000588074 CCDC9Q9Y3X0 531 aaKnown RBP8.54□□□□□ -1.04
LINC01538-201ENST00000588074 STK24Q9Y6E0 443 aa8.54□□□□□ -1.04
LINC01538-201ENST00000588074 ZMYND10O75800 440 aa8.54□□□□□ -1.04
LINC01538-201ENST00000588074 UBE2Q2Q8WVN8 375 aa8.53□□□□□ -1.04
LINC01538-201ENST00000588074 WDR70Q9NW82 654 aa8.53□□□□□ -1.04
LINC01538-201ENST00000588074 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP8.52□□□□□ -1.05
LINC01538-201ENST00000588074 APBB1O00213 710 aa8.52□□□□□ -1.05
LINC01538-201ENST00000588074 MKRN3Q13064 507 aaKnown RBP8.52□□□□□ -1.05
LINC01538-201ENST00000588074 ZFP91Q96JP5 570 aaPredicted RBP8.52□□□□□ -1.05
LINC01538-201ENST00000588074 VGFO15240 615 aaPredicted RBP8.5□□□□□ -1.05
LINC01538-201ENST00000588074 ZBTB47Q9UFB7 747 aaPredicted RBP8.5□□□□□ -1.05
LINC01538-201ENST00000588074 SSUH2Q9Y2M2 353 aa8.5□□□□□ -1.05
LINC01538-201ENST00000588074 ZBTB7CA1YPR0 619 aa8.5□□□□□ -1.05
LINC01538-201ENST00000588074 TESPA1A2RU30 521 aaPredicted RBP8.49□□□□□ -1.05
LINC01538-201ENST00000588074 PDIA4P13667 645 aaKnown RBP8.49□□□□□ -1.05
LINC01538-201ENST00000588074 NUBP1P53384 320 aa8.49□□□□□ -1.05
LINC01538-201ENST00000588074 GSE1Q14687 1217 aa8.49□□□□□ -1.05
LINC01538-201ENST00000588074 ABCB7O75027 752 aa8.48□□□□□ -1.05
LINC01538-201ENST00000588074 OSCARQ8IYS5 282 aa8.47□□□□□ -1.05
LINC01538-201ENST00000588074 ZEB1P37275 1124 aaPredicted RBP8.46□□□□□ -1.05
LINC01538-201ENST00000588074 DCAF8Q5TAQ9 597 aa8.45□□□□□ -1.06
LINC01538-201ENST00000588074 PLEKHG5O94827 1062 aa8.44□□□□□ -1.06
LINC01538-201ENST00000588074 KDM4CQ9H3R0 1056 aa8.44□□□□□ -1.06
LINC01538-201ENST00000588074 CAPN15O75808 1086 aa8.43□□□□□ -1.06
LINC01538-201ENST00000588074 ARHGEF1Q92888 912 aaKnown RBP8.43□□□□□ -1.06
LINC01538-201ENST00000588074 BARGINQ6ZT62 677 aa8.43□□□□□ -1.06
LINC01538-201ENST00000588074 IGSF3O75054 1194 aa8.42□□□□□ -1.06
LINC01538-201ENST00000588074 RYDENQ9NUL5 291 aaKnown RBP8.42□□□□□ -1.06
LINC01538-201ENST00000588074 CCDC82Q8N4S0 544 aa8.42□□□□□ -1.06
LINC01538-201ENST00000588074 ZBTB12Q9Y330 459 aaPredicted RBP8.4□□□□□ -1.06
LINC01538-201ENST00000588074 NEUROD1Q13562 356 aa8.4□□□□□ -1.07
LINC01538-201ENST00000588074 KCTD17Q8N5Z5 321 aa8.39□□□□□ -1.07
LINC01538-201ENST00000588074 SGIP1Q9BQI5 828 aa8.39□□□□□ -1.07
LINC01538-201ENST00000588074 SPDYE2BA6NHP3 402 aa8.38□□□□□ -1.07
LINC01538-201ENST00000588074 SPDYE6P0CI01 402 aa8.38□□□□□ -1.07
LINC01538-201ENST00000588074 SPDYE2Q495Y8 402 aa8.38□□□□□ -1.07
LINC01538-201ENST00000588074 AK7Q96M32 723 aa8.37□□□□□ -1.07
LINC01538-201ENST00000588074 E2F4Q16254 413 aa8.36□□□□□ -1.07
LINC01538-201ENST00000588074 ZNF428Q96B54 188 aa8.36□□□□□ -1.07
LINC01538-201ENST00000588074 FAM117AQ9C073 453 aa8.35□□□□□ -1.07
LINC01538-201ENST00000588074 CLUAP1Q96AJ1 413 aa8.35□□□□□ -1.07
LINC01538-201ENST00000588074 RAD21O60216 631 aa8.33□□□□□ -1.08
LINC01538-201ENST00000588074 RBM26Q5T8P6 1007 aaKnown RBP8.33□□□□□ -1.08
LINC01538-201ENST00000588074 PYGBP11216 843 aa8.32□□□□□ -1.08
LINC01538-201ENST00000588074 PDE4DQ08499 809 aa8.32□□□□□ -1.08
LINC01538-201ENST00000588074 PCGF6Q9BYE7 350 aa8.32□□□□□ -1.08
LINC01538-201ENST00000588074 POTEHQ6S545 545 aa8.32□□□□□ -1.08
LINC01538-201ENST00000588074 TRIM66O15016 1216 aa8.31□□□□□ -1.08
LINC01538-201ENST00000588074 RGS22Q8NE09 1264 aa8.31□□□□□ -1.08
LINC01538-201ENST00000588074 PPP1R37O75864 691 aa8.3□□□□□ -1.08
LINC01538-201ENST00000588074 ANO8Q9HCE9 1232 aaPredicted RBP8.3□□□□□ -1.08
LINC01538-201ENST00000588074 MTMR7Q9Y216 660 aa8.3□□□□□ -1.08
LINC01538-201ENST00000588074 PLEKHG3A1L390 1219 aa8.3□□□□□ -1.08
LINC01538-201ENST00000588074 ZNF316A6NFI3 1004 aaPredicted RBP8.3□□□□□ -1.08
LINC01538-201ENST00000588074 ONECUT3O60422 494 aaPredicted RBP8.3□□□□□ -1.08
LINC01538-201ENST00000588074 RASEFQ8IZ41 740 aa8.3□□□□□ -1.08
LINC01538-201ENST00000588074 PKNOX2Q96KN3 472 aa8.3□□□□□ -1.08
LINC01538-201ENST00000588074 CHRM1P11229 460 aaPredicted RBP8.29□□□□□ -1.08
LINC01538-201ENST00000588074 FAM212AQ96EL1 285 aa8.29□□□□□ -1.08
LINC01538-201ENST00000588074 AEBP1Q8IUX7 1158 aa8.29□□□□□ -1.08
LINC01538-201ENST00000588074 KRI1Q8N9T8 703 aaKnown RBP8.29□□□□□ -1.08
LINC01538-201ENST00000588074 FOXD4L5Q5VV16 416 aaPredicted RBP8.28□□□□□ -1.08
LINC01538-201ENST00000588074 FOXD4L4Q8WXT5 416 aaPredicted RBP8.28□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 81.7 ms