RNA–Protein interactions for RNA: ENST00000588040.1

AC093227.1-201, humanhuman

TSL 3 BASIC

Gene AC093227.1, Length 1,360 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC093227.1-201ENST00000588040 FAM163AQ96GL9 167 aaPredicted RBP17.1■□□□□ 0.33
AC093227.1-201ENST00000588040 MIER1Q8N108 512 aa17.09■□□□□ 0.33
AC093227.1-201ENST00000588040 CREBZFQ9NS37 354 aa17.07■□□□□ 0.32
AC093227.1-201ENST00000588040 MAMSTRQ6ZN01 415 aa17.06■□□□□ 0.32
AC093227.1-201ENST00000588040 PLCD3Q8N3E9 789 aa17.05■□□□□ 0.32
AC093227.1-201ENST00000588040 PLEKHG5O94827 1062 aa17.03■□□□□ 0.32
AC093227.1-201ENST00000588040 METRNQ9UJH8 293 aa17.02■□□□□ 0.32
AC093227.1-201ENST00000588040 PHF12Q96QT6 1004 aa17.01■□□□□ 0.31
AC093227.1-201ENST00000588040 C7P10643 843 aa16.97■□□□□ 0.31
AC093227.1-201ENST00000588040 SLC39A7Q92504 469 aa16.95■□□□□ 0.3
AC093227.1-201ENST00000588040 ASTLQ6HA08 431 aaPredicted RBP16.93■□□□□ 0.3
AC093227.1-201ENST00000588040 ZBTB47Q9UFB7 747 aaPredicted RBP16.9■□□□□ 0.3
AC093227.1-201ENST00000588040 PAK3O75914 559 aaPredicted RBP16.89■□□□□ 0.3
AC093227.1-201ENST00000588040 MNX1P50219 401 aaPredicted RBP16.88■□□□□ 0.29
AC093227.1-201ENST00000588040 ATMINO43313 823 aaPredicted RBP16.87■□□□□ 0.29
AC093227.1-201ENST00000588040 CDAN1Q8IWY9 1227 aa16.87■□□□□ 0.29
AC093227.1-201ENST00000588040 IFNLR1Q8IU57 520 aaPredicted RBP16.86■□□□□ 0.29
AC093227.1-201ENST00000588040 SCUBE2Q9NQ36 999 aa16.86■□□□□ 0.29
AC093227.1-201ENST00000588040 KLHL34Q8N239 644 aa16.84■□□□□ 0.29
AC093227.1-201ENST00000588040 NPM1P06748 294 aaKnown RBP eCLIP16.82■□□□□ 0.28
AC093227.1-201ENST00000588040 MS4A3Q96HJ5 214 aa16.74■□□□□ 0.27
AC093227.1-201ENST00000588040 SPOCK2Q92563 424 aa16.7■□□□□ 0.26
AC093227.1-201ENST00000588040 NUBP1P53384 320 aa16.64■□□□□ 0.26
AC093227.1-201ENST00000588040 POTEFA5A3E0 1075 aa16.61■□□□□ 0.25
AC093227.1-201ENST00000588040 ATN1P54259 1190 aaPredicted RBP16.6■□□□□ 0.25
AC093227.1-201ENST00000588040 MMRN1Q13201 1228 aa16.59■□□□□ 0.25
AC093227.1-201ENST00000588040 RASEFQ8IZ41 740 aa16.57■□□□□ 0.24
AC093227.1-201ENST00000588040 FAM212AQ96EL1 285 aa16.52■□□□□ 0.24
AC093227.1-201ENST00000588040 DCAF8Q5TAQ9 597 aa16.5■□□□□ 0.23
AC093227.1-201ENST00000588040 SPNS2Q8IVW8 549 aa16.5■□□□□ 0.23
AC093227.1-201ENST00000588040 TSPYL2Q9H2G4 693 aaPredicted RBP16.5■□□□□ 0.23
AC093227.1-201ENST00000588040 GSE1Q14687 1217 aa16.48■□□□□ 0.23
AC093227.1-201ENST00000588040 CIZ1Q9ULV3 898 aaPredicted RBP16.43■□□□□ 0.22
AC093227.1-201ENST00000588040 ST18O60284 1047 aa16.41■□□□□ 0.22
AC093227.1-201ENST00000588040 CCDC61Q9Y6R9 512 aa16.39■□□□□ 0.21
AC093227.1-201ENST00000588040 BMP2KQ9NSY1 1161 aaPredicted RBP16.38■□□□□ 0.21
AC093227.1-201ENST00000588040 AMER1Q5JTC6 1135 aaPredicted RBP16.36■□□□□ 0.21
AC093227.1-201ENST00000588040 COLQQ9Y215 455 aaPredicted RBP16.34■□□□□ 0.21
AC093227.1-201ENST00000588040 TRIM41Q8WV44 630 aa16.31■□□□□ 0.2
AC093227.1-201ENST00000588040 RTN4Q9NQC3 1192 aaKnown RBP16.3■□□□□ 0.2
AC093227.1-201ENST00000588040 PKD2Q13563 968 aa16.27■□□□□ 0.2
AC093227.1-201ENST00000588040 KIF12Q96FN5 646 aa16.27■□□□□ 0.2
AC093227.1-201ENST00000588040 TRPC6Q9Y210 931 aa16.27■□□□□ 0.2
AC093227.1-201ENST00000588040 CHRM1P11229 460 aaPredicted RBP16.26■□□□□ 0.19
AC093227.1-201ENST00000588040 SEC24BO95487 1268 aa16.26■□□□□ 0.19
AC093227.1-201ENST00000588040 PYGBP11216 843 aa16.26■□□□□ 0.19
AC093227.1-201ENST00000588040 TIE1P35590 1138 aa16.25■□□□□ 0.19
AC093227.1-201ENST00000588040 SLAIN1Q8ND83 568 aa16.24■□□□□ 0.19
AC093227.1-201ENST00000588040 ECM2O94769 699 aaPredicted RBP16.19■□□□□ 0.18
AC093227.1-201ENST00000588040 MAP3K13O43283 966 aa16.18■□□□□ 0.18
AC093227.1-201ENST00000588040 SGIP1Q9BQI5 828 aa16.18■□□□□ 0.18
AC093227.1-201ENST00000588040 TMEM121BQ9BXQ6 578 aaPredicted RBP16.15■□□□□ 0.18
AC093227.1-201ENST00000588040 PCDHB13Q9Y5F0 798 aa16.14■□□□□ 0.17
AC093227.1-201ENST00000588040 TTLL13PA6NNM8 815 aa16.13■□□□□ 0.17
AC093227.1-201ENST00000588040 IER5LQ5T953 404 aa16.11■□□□□ 0.17
AC093227.1-201ENST00000588040 ZNF467Q7Z7K2 595 aaPredicted RBP16.09■□□□□ 0.17
AC093227.1-201ENST00000588040 IFNL1Q8IU54 200 aa16.07■□□□□ 0.16
AC093227.1-201ENST00000588040 PCDHB8Q9UN66 801 aa16.04■□□□□ 0.16
AC093227.1-201ENST00000588040 RIOK3O14730 519 aaKnown RBP16.01■□□□□ 0.15
AC093227.1-201ENST00000588040 RGL2O15211 777 aa16.01■□□□□ 0.15
AC093227.1-201ENST00000588040 RNF25Q96BH1 459 aaPredicted RBP16.01■□□□□ 0.15
AC093227.1-201ENST00000588040 TRIM35Q9UPQ4 493 aa16■□□□□ 0.15
AC093227.1-201ENST00000588040 MARVELD3Q96A59 401 aa15.99■□□□□ 0.15
AC093227.1-201ENST00000588040 TAOK2Q9UL54 1235 aa15.96■□□□□ 0.15
AC093227.1-201ENST00000588040 SNPHO15079 494 aa15.93■□□□□ 0.14
AC093227.1-201ENST00000588040 VGFO15240 615 aaPredicted RBP15.92■□□□□ 0.14
AC093227.1-201ENST00000588040 PDAP1Q13442 181 aaKnown RBP15.92■□□□□ 0.14
AC093227.1-201ENST00000588040 PSEN1P49768 467 aa15.89■□□□□ 0.13
AC093227.1-201ENST00000588040 KRTAP3-3Q9BYR6 98 aa15.87■□□□□ 0.13
AC093227.1-201ENST00000588040 KRTAP3-2Q9BYR7 98 aa15.87■□□□□ 0.13
AC093227.1-201ENST00000588040 TMEM106CQ9BVX2 250 aa15.85■□□□□ 0.13
AC093227.1-201ENST00000588040 PLCG2P16885 1265 aa15.84■□□□□ 0.13
AC093227.1-201ENST00000588040 NISCHQ9Y2I1 1504 aa15.82■□□□□ 0.12
AC093227.1-201ENST00000588040 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP15.82■□□□□ 0.12
AC093227.1-201ENST00000588040 ZFP91Q96JP5 570 aaPredicted RBP15.82■□□□□ 0.12
AC093227.1-201ENST00000588040 DCAF8L2P0C7V8 631 aa15.81■□□□□ 0.12
AC093227.1-201ENST00000588040 IRX5P78411 483 aaPredicted RBP15.75■□□□□ 0.11
AC093227.1-201ENST00000588040 POTEB3A0JP26 581 aa15.75■□□□□ 0.11
AC093227.1-201ENST00000588040 STK25O00506 426 aa15.75■□□□□ 0.11
AC093227.1-201ENST00000588040 EMP3P54852 163 aa15.75■□□□□ 0.11
AC093227.1-201ENST00000588040 POTEBQ6S5H4 581 aa15.75■□□□□ 0.11
AC093227.1-201ENST00000588040 BCL11BQ9C0K0 894 aaPredicted RBP15.73■□□□□ 0.11
AC093227.1-201ENST00000588040 CHGAP10645 457 aaKnown RBP15.72■□□□□ 0.11
AC093227.1-201ENST00000588040 HS6ST3Q8IZP7 471 aa15.71■□□□□ 0.11
AC093227.1-201ENST00000588040 HS3ST6Q96QI5 342 aa15.71■□□□□ 0.11
AC093227.1-201ENST00000588040 EIF2AK3Q9NZJ5 1116 aaKnown RBP15.71■□□□□ 0.11
AC093227.1-201ENST00000588040 STK24Q9Y6E0 443 aa15.71■□□□□ 0.11
AC093227.1-201ENST00000588040 GOLGA2Q08379 1002 aa15.69■□□□□ 0.1
AC093227.1-201ENST00000588040 CABP2Q9NPB3 220 aa15.69■□□□□ 0.1
AC093227.1-201ENST00000588040 OCEL1Q9H607 264 aa15.63■□□□□ 0.09
AC093227.1-201ENST00000588040 FAM205CA6NFA0 338 aa15.62■□□□□ 0.09
AC093227.1-201ENST00000588040 MKRN3Q13064 507 aaKnown RBP15.62■□□□□ 0.09
AC093227.1-201ENST00000588040 EFCAB3Q8N7B9 438 aa15.6■□□□□ 0.09
AC093227.1-201ENST00000588040 DNAJC5Q9H3Z4 198 aa15.59■□□□□ 0.09
AC093227.1-201ENST00000588040 SOX12O15370 315 aa15.55■□□□□ 0.08
AC093227.1-201ENST00000588040 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP15.5■□□□□ 0.07
AC093227.1-201ENST00000588040 BBXQ8WY36 941 aaPredicted RBP15.49■□□□□ 0.07
AC093227.1-201ENST00000588040 RNF166Q96A37 237 aaPredicted RBP15.49■□□□□ 0.07
AC093227.1-201ENST00000588040 ILDR1Q86SU0 546 aaPredicted RBP15.48■□□□□ 0.07
AC093227.1-201ENST00000588040 NLRP6P59044 892 aa15.46■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms