RNA–Protein interactions for RNA: ENST00000587353.5

SMAD2-209, Transcript of SMAD family member 2, humanhuman

TSL 3

Gene SMAD2, Length 584 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD2-209ENST00000587353 MAMSTRQ6ZN01 415 aa10.06□□□□□ -0.8
SMAD2-209ENST00000587353 SLC39A7Q92504 469 aa10.06□□□□□ -0.8
SMAD2-209ENST00000587353 ASTLQ6HA08 431 aaPredicted RBP10.04□□□□□ -0.8
SMAD2-209ENST00000587353 ATMINO43313 823 aaPredicted RBP10.02□□□□□ -0.81
SMAD2-209ENST00000587353 PROM2Q8N271 834 aa10.02□□□□□ -0.81
SMAD2-209ENST00000587353 POTEJP0CG39 1038 aa10□□□□□ -0.81
SMAD2-209ENST00000587353 FAM163AQ96GL9 167 aaPredicted RBP10□□□□□ -0.81
SMAD2-209ENST00000587353 MS4A3Q96HJ5 214 aa9.99□□□□□ -0.81
SMAD2-209ENST00000587353 MNX1P50219 401 aaPredicted RBP9.98□□□□□ -0.81
SMAD2-209ENST00000587353 SCUBE2Q9NQ36 999 aa9.96□□□□□ -0.82
SMAD2-209ENST00000587353 FKBP8Q14318 412 aa9.93□□□□□ -0.82
SMAD2-209ENST00000587353 LCE2DQ5TA82 110 aaPredicted RBP9.92□□□□□ -0.82
SMAD2-209ENST00000587353 ATN1P54259 1190 aaPredicted RBP9.89□□□□□ -0.83
SMAD2-209ENST00000587353 TSPYL2Q9H2G4 693 aaPredicted RBP9.88□□□□□ -0.83
SMAD2-209ENST00000587353 PLEKHG5O94827 1062 aa9.83□□□□□ -0.84
SMAD2-209ENST00000587353 CCDC61Q9Y6R9 512 aa9.82□□□□□ -0.84
SMAD2-209ENST00000587353 KIF12Q96FN5 646 aa9.81□□□□□ -0.84
SMAD2-209ENST00000587353 POTEFA5A3E0 1075 aa9.79□□□□□ -0.84
SMAD2-209ENST00000587353 BMP2KQ9NSY1 1161 aaPredicted RBP9.79□□□□□ -0.84
SMAD2-209ENST00000587353 CDAN1Q8IWY9 1227 aa9.78□□□□□ -0.84
SMAD2-209ENST00000587353 SEC24BO95487 1268 aa9.77□□□□□ -0.85
SMAD2-209ENST00000587353 FBXO3Q9UK99 471 aa9.77□□□□□ -0.85
SMAD2-209ENST00000587353 TIE1P35590 1138 aa9.76□□□□□ -0.85
SMAD2-209ENST00000587353 MIER1Q8N108 512 aa9.76□□□□□ -0.85
SMAD2-209ENST00000587353 TRPC6Q9Y210 931 aa9.74□□□□□ -0.85
SMAD2-209ENST00000587353 MAP3K13O43283 966 aa9.73□□□□□ -0.85
SMAD2-209ENST00000587353 PLCD3Q8N3E9 789 aa9.72□□□□□ -0.85
SMAD2-209ENST00000587353 ZBTB47Q9UFB7 747 aaPredicted RBP9.71□□□□□ -0.86
SMAD2-209ENST00000587353 COLQQ9Y215 455 aaPredicted RBP9.71□□□□□ -0.86
SMAD2-209ENST00000587353 TTLL13PA6NNM8 815 aa9.68□□□□□ -0.86
SMAD2-209ENST00000587353 IER5LQ5T953 404 aa9.66□□□□□ -0.86
SMAD2-209ENST00000587353 SLAIN1Q8ND83 568 aa9.65□□□□□ -0.86
SMAD2-209ENST00000587353 ST18O60284 1047 aa9.64□□□□□ -0.87
SMAD2-209ENST00000587353 TRIM35Q9UPQ4 493 aa9.63□□□□□ -0.87
SMAD2-209ENST00000587353 RASEFQ8IZ41 740 aa9.62□□□□□ -0.87
SMAD2-209ENST00000587353 SGIP1Q9BQI5 828 aa9.6□□□□□ -0.87
SMAD2-209ENST00000587353 MMRN1Q13201 1228 aa9.57□□□□□ -0.88
SMAD2-209ENST00000587353 PCDHB13Q9Y5F0 798 aa9.57□□□□□ -0.88
SMAD2-209ENST00000587353 VASPP50552 380 aaPredicted RBP9.56□□□□□ -0.88
SMAD2-209ENST00000587353 PLCG2P16885 1265 aa9.54□□□□□ -0.88
SMAD2-209ENST00000587353 SPNS2Q8IVW8 549 aa9.54□□□□□ -0.88
SMAD2-209ENST00000587353 TMEM121BQ9BXQ6 578 aaPredicted RBP9.53□□□□□ -0.88
SMAD2-209ENST00000587353 TMEM106CQ9BVX2 250 aa9.51□□□□□ -0.89
SMAD2-209ENST00000587353 SNPHO15079 494 aa9.5□□□□□ -0.89
SMAD2-209ENST00000587353 NUBP1P53384 320 aa9.5□□□□□ -0.89
SMAD2-209ENST00000587353 KLHL34Q8N239 644 aa9.5□□□□□ -0.89
SMAD2-209ENST00000587353 IFNL1Q8IU54 200 aa9.49□□□□□ -0.89
SMAD2-209ENST00000587353 FAM212AQ96EL1 285 aa9.49□□□□□ -0.89
SMAD2-209ENST00000587353 IRX5P78411 483 aaPredicted RBP9.46□□□□□ -0.9
SMAD2-209ENST00000587353 OCEL1Q9H607 264 aa9.44□□□□□ -0.9
SMAD2-209ENST00000587353 EIF2AK3Q9NZJ5 1116 aaKnown RBP9.44□□□□□ -0.9
SMAD2-209ENST00000587353 MARVELD3Q96A59 401 aa9.43□□□□□ -0.9
SMAD2-209ENST00000587353 DCAF8Q5TAQ9 597 aa9.41□□□□□ -0.9
SMAD2-209ENST00000587353 GSE1Q14687 1217 aa9.39□□□□□ -0.91
SMAD2-209ENST00000587353 SPOCK2Q92563 424 aa9.38□□□□□ -0.91
SMAD2-209ENST00000587353 IFNLR1Q8IU57 520 aaPredicted RBP9.37□□□□□ -0.91
SMAD2-209ENST00000587353 EMP3P54852 163 aa9.34□□□□□ -0.91
SMAD2-209ENST00000587353 PYGBP11216 843 aa9.29□□□□□ -0.92
SMAD2-209ENST00000587353 C3orf67Q6ZVT6 689 aa9.29□□□□□ -0.92
SMAD2-209ENST00000587353 CHRM1P11229 460 aaPredicted RBP9.28□□□□□ -0.92
SMAD2-209ENST00000587353 L3MBTL3Q96JM7 780 aaPredicted RBP9.27□□□□□ -0.93
SMAD2-209ENST00000587353 HS3ST6Q96QI5 342 aa9.27□□□□□ -0.93
SMAD2-209ENST00000587353 FAM205CA6NFA0 338 aa9.26□□□□□ -0.93
SMAD2-209ENST00000587353 KRTAP3-3Q9BYR6 98 aa9.26□□□□□ -0.93
SMAD2-209ENST00000587353 KRTAP3-2Q9BYR7 98 aa9.26□□□□□ -0.93
SMAD2-209ENST00000587353 CIZ1Q9ULV3 898 aaPredicted RBP9.26□□□□□ -0.93
SMAD2-209ENST00000587353 PCDHB8Q9UN66 801 aa9.26□□□□□ -0.93
SMAD2-209ENST00000587353 ZNF467Q7Z7K2 595 aaPredicted RBP9.24□□□□□ -0.93
SMAD2-209ENST00000587353 TRIM41Q8WV44 630 aa9.24□□□□□ -0.93
SMAD2-209ENST00000587353 POTEB3A0JP26 581 aa9.23□□□□□ -0.93
SMAD2-209ENST00000587353 GOLGA2Q08379 1002 aa9.23□□□□□ -0.93
SMAD2-209ENST00000587353 POTEBQ6S5H4 581 aa9.23□□□□□ -0.93
SMAD2-209ENST00000587353 MKRN3Q13064 507 aaKnown RBP9.22□□□□□ -0.93
SMAD2-209ENST00000587353 PDCD7Q8N8D1 485 aaKnown RBP9.22□□□□□ -0.93
SMAD2-209ENST00000587353 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP9.17□□□□□ -0.944e-8■■■■□ 20
SMAD2-209ENST00000587353 PDAP1Q13442 181 aaKnown RBP9.11□□□□□ -0.95
SMAD2-209ENST00000587353 PSEN1P49768 467 aa9.1□□□□□ -0.95
SMAD2-209ENST00000587353 G3V3G9 751 aa9.09□□□□□ -0.95
SMAD2-209ENST00000587353 ZNF710Q8N1W2 664 aa9.09□□□□□ -0.95
SMAD2-209ENST00000587353 RNF166Q96A37 237 aaPredicted RBP9.08□□□□□ -0.96
SMAD2-209ENST00000587353 ERBB3P21860 1342 aa9.07□□□□□ -0.96
SMAD2-209ENST00000587353 HOXB3P14651 431 aaPredicted RBP9.07□□□□□ -0.96
SMAD2-209ENST00000587353 HOXB1P14653 301 aaPredicted RBP9.07□□□□□ -0.96
SMAD2-209ENST00000587353 DPY19L2Q6NUT2 758 aa9.05□□□□□ -0.96
SMAD2-209ENST00000587353 ILDR1Q86SU0 546 aaPredicted RBP9.05□□□□□ -0.96
SMAD2-209ENST00000587353 DOK7Q18PE1 504 aa9.04□□□□□ -0.96
SMAD2-209ENST00000587353 TAOK2Q9UL54 1235 aa9.04□□□□□ -0.96
SMAD2-209ENST00000587353 BOLA1Q9Y3E2 137 aa9.04□□□□□ -0.96
SMAD2-209ENST00000587353 RIOK3O14730 519 aaKnown RBP9.03□□□□□ -0.96
SMAD2-209ENST00000587353 MYT1LQ9UL68 1186 aa9.03□□□□□ -0.96
SMAD2-209ENST00000587353 RIMBP2O15034 1052 aa9□□□□□ -0.97
SMAD2-209ENST00000587353 VGFO15240 615 aaPredicted RBP9□□□□□ -0.97
SMAD2-209ENST00000587353 ECM2O94769 699 aaPredicted RBP8.98□□□□□ -0.97
SMAD2-209ENST00000587353 VARS2Q5ST30 1063 aaKnown RBP8.98□□□□□ -0.97
SMAD2-209ENST00000587353 CABP2Q9NPB3 220 aa8.98□□□□□ -0.97
SMAD2-209ENST00000587353 RNF25Q96BH1 459 aaPredicted RBP8.96□□□□□ -0.98
SMAD2-209ENST00000587353 PKD2Q13563 968 aa8.94□□□□□ -0.98
SMAD2-209ENST00000587353 ZNF687Q8N1G0 1237 aa8.94□□□□□ -0.98
SMAD2-209ENST00000587353 PTGER2P43116 358 aa8.93□□□□□ -0.98
SMAD2-209ENST00000587353 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP8.92□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 78.4 ms