RNA–Protein interactions for RNA: ENST00000585953.5

RPRD1A-204, Transcript of regulation of nuclear pre-mRNA domain containing 1A, humanhuman

TSL 3

Gene RPRD1A, Length 2,357 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1A-204ENST00000585953 PELP1Q8IZL8 1130 aaKnown RBP7.26□□□□□ -1.25
RPRD1A-204ENST00000585953 SLC39A7Q92504 469 aa7.26□□□□□ -1.25
RPRD1A-204ENST00000585953 ASTLQ6HA08 431 aaPredicted RBP7.25□□□□□ -1.25
RPRD1A-204ENST00000585953 METRNQ9UJH8 293 aa7.24□□□□□ -1.25
RPRD1A-204ENST00000585953 PROM2Q8N271 834 aa7.22□□□□□ -1.25
RPRD1A-204ENST00000585953 ATMINO43313 823 aaPredicted RBP7.2□□□□□ -1.26
RPRD1A-204ENST00000585953 POTEJP0CG39 1038 aa7.19□□□□□ -1.26
RPRD1A-204ENST00000585953 SCUBE2Q9NQ36 999 aa7.19□□□□□ -1.26
RPRD1A-204ENST00000585953 LCE2DQ5TA82 110 aaPredicted RBP7.18□□□□□ -1.26
RPRD1A-204ENST00000585953 MS4A3Q96HJ5 214 aa7.17□□□□□ -1.26
RPRD1A-204ENST00000585953 MNX1P50219 401 aaPredicted RBP7.17□□□□□ -1.26
RPRD1A-204ENST00000585953 FAM163AQ96GL9 167 aaPredicted RBP7.16□□□□□ -1.26
RPRD1A-204ENST00000585953 FBXO3Q9UK99 471 aa7.1□□□□□ -1.27
RPRD1A-204ENST00000585953 ATN1P54259 1190 aaPredicted RBP7.09□□□□□ -1.27
RPRD1A-204ENST00000585953 CDAN1Q8IWY9 1227 aa7.05□□□□□ -1.28
RPRD1A-204ENST00000585953 CCDC61Q9Y6R9 512 aa7.05□□□□□ -1.28
RPRD1A-204ENST00000585953 POTEFA5A3E0 1075 aa7.04□□□□□ -1.28
RPRD1A-204ENST00000585953 TIE1P35590 1138 aa7.04□□□□□ -1.28
RPRD1A-204ENST00000585953 KIF12Q96FN5 646 aa7.04□□□□□ -1.28
RPRD1A-204ENST00000585953 BMP2KQ9NSY1 1161 aaPredicted RBP7.03□□□□□ -1.28
RPRD1A-204ENST00000585953 TSPYL2Q9H2G4 693 aaPredicted RBP7.03□□□□□ -1.28
RPRD1A-204ENST00000585953 VASPP50552 380 aaPredicted RBP7.02□□□□□ -1.29
RPRD1A-204ENST00000585953 SEC24BO95487 1268 aa6.99□□□□□ -1.29
RPRD1A-204ENST00000585953 IER5LQ5T953 404 aa6.98□□□□□ -1.29
RPRD1A-204ENST00000585953 COLQQ9Y215 455 aaPredicted RBP6.96□□□□□ -1.29
RPRD1A-204ENST00000585953 TRPC6Q9Y210 931 aa6.95□□□□□ -1.3
RPRD1A-204ENST00000585953 MAP3K13O43283 966 aa6.95□□□□□ -1.3
RPRD1A-204ENST00000585953 TTLL13PA6NNM8 815 aa6.94□□□□□ -1.3
RPRD1A-204ENST00000585953 IFNLR1Q8IU57 520 aaPredicted RBP6.94□□□□□ -1.3
RPRD1A-204ENST00000585953 ST18O60284 1047 aa6.93□□□□□ -1.3
RPRD1A-204ENST00000585953 SGIP1Q9BQI5 828 aa6.93□□□□□ -1.3
RPRD1A-204ENST00000585953 SLAIN1Q8ND83 568 aa6.92□□□□□ -1.3
RPRD1A-204ENST00000585953 MMRN1Q13201 1228 aa6.91□□□□□ -1.3
RPRD1A-204ENST00000585953 PLEKHG5O94827 1062 aa6.91□□□□□ -1.3
RPRD1A-204ENST00000585953 AMER1Q5JTC6 1135 aaPredicted RBP6.91□□□□□ -1.3
RPRD1A-204ENST00000585953 MIER1Q8N108 512 aa6.91□□□□□ -1.3
RPRD1A-204ENST00000585953 PLCD3Q8N3E9 789 aa6.91□□□□□ -1.3
RPRD1A-204ENST00000585953 TMEM121BQ9BXQ6 578 aaPredicted RBP6.91□□□□□ -1.3
RPRD1A-204ENST00000585953 RTN4Q9NQC3 1192 aaKnown RBP6.9□□□□□ -1.3
RPRD1A-204ENST00000585953 TRIM35Q9UPQ4 493 aa6.9□□□□□ -1.31
RPRD1A-204ENST00000585953 SPNS2Q8IVW8 549 aa6.89□□□□□ -1.31
RPRD1A-204ENST00000585953 RASEFQ8IZ41 740 aa6.87□□□□□ -1.31
RPRD1A-204ENST00000585953 SNPHO15079 494 aa6.86□□□□□ -1.31
RPRD1A-204ENST00000585953 KLHL34Q8N239 644 aa6.86□□□□□ -1.31
RPRD1A-204ENST00000585953 PLCG2P16885 1265 aa6.84□□□□□ -1.31
RPRD1A-204ENST00000585953 PCDHB13Q9Y5F0 798 aa6.84□□□□□ -1.31
RPRD1A-204ENST00000585953 SPOCK2Q92563 424 aa6.83□□□□□ -1.32
RPRD1A-204ENST00000585953 ZBTB47Q9UFB7 747 aaPredicted RBP6.83□□□□□ -1.32
RPRD1A-204ENST00000585953 IRX5P78411 483 aaPredicted RBP6.8□□□□□ -1.32
RPRD1A-204ENST00000585953 TMEM106CQ9BVX2 250 aa6.79□□□□□ -1.32
RPRD1A-204ENST00000585953 IFNL1Q8IU54 200 aa6.77□□□□□ -1.32
RPRD1A-204ENST00000585953 OCEL1Q9H607 264 aa6.77□□□□□ -1.32
RPRD1A-204ENST00000585953 EIF2AK3Q9NZJ5 1116 aaKnown RBP6.77□□□□□ -1.32
RPRD1A-204ENST00000585953 NUBP1P53384 320 aa6.74□□□□□ -1.33
RPRD1A-204ENST00000585953 PKD2Q13563 968 aa6.74□□□□□ -1.33
RPRD1A-204ENST00000585953 MARVELD3Q96A59 401 aa6.74□□□□□ -1.33
RPRD1A-204ENST00000585953 FAM212AQ96EL1 285 aa6.72□□□□□ -1.33
RPRD1A-204ENST00000585953 EMP3P54852 163 aa6.71□□□□□ -1.34
RPRD1A-204ENST00000585953 CIZ1Q9ULV3 898 aaPredicted RBP6.7□□□□□ -1.34
RPRD1A-204ENST00000585953 GSE1Q14687 1217 aa6.68□□□□□ -1.34
RPRD1A-204ENST00000585953 KRTAP3-3Q9BYR6 98 aa6.68□□□□□ -1.34
RPRD1A-204ENST00000585953 KRTAP3-2Q9BYR7 98 aa6.68□□□□□ -1.34
RPRD1A-204ENST00000585953 ECM2O94769 699 aaPredicted RBP6.67□□□□□ -1.34
RPRD1A-204ENST00000585953 DCAF8Q5TAQ9 597 aa6.66□□□□□ -1.34
RPRD1A-204ENST00000585953 C3orf67Q6ZVT6 689 aa6.66□□□□□ -1.34
RPRD1A-204ENST00000585953 L3MBTL3Q96JM7 780 aaPredicted RBP6.66□□□□□ -1.34
RPRD1A-204ENST00000585953 HS3ST6Q96QI5 342 aa6.66□□□□□ -1.34
RPRD1A-204ENST00000585953 TRIM41Q8WV44 630 aa6.64□□□□□ -1.35
RPRD1A-204ENST00000585953 FAM205CA6NFA0 338 aa6.63□□□□□ -1.35
RPRD1A-204ENST00000585953 POTEB3A0JP26 581 aa6.62□□□□□ -1.35
RPRD1A-204ENST00000585953 POTEBQ6S5H4 581 aa6.62□□□□□ -1.35
RPRD1A-204ENST00000585953 PDCD7Q8N8D1 485 aaKnown RBP6.62□□□□□ -1.35
RPRD1A-204ENST00000585953 RGL2O15211 777 aa6.61□□□□□ -1.35
RPRD1A-204ENST00000585953 DCAF8L2P0C7V8 631 aa6.59□□□□□ -1.35
RPRD1A-204ENST00000585953 PYGBP11216 843 aa6.58□□□□□ -1.36
RPRD1A-204ENST00000585953 CHRM1P11229 460 aaPredicted RBP6.58□□□□□ -1.36
RPRD1A-204ENST00000585953 GOLGA2Q08379 1002 aa6.58□□□□□ -1.36
RPRD1A-204ENST00000585953 MKRN3Q13064 507 aaKnown RBP6.58□□□□□ -1.36
RPRD1A-204ENST00000585953 RNF25Q96BH1 459 aaPredicted RBP6.58□□□□□ -1.36
RPRD1A-204ENST00000585953 PCDHB8Q9UN66 801 aa6.58□□□□□ -1.36
RPRD1A-204ENST00000585953 ZNF467Q7Z7K2 595 aaPredicted RBP6.55□□□□□ -1.36
RPRD1A-204ENST00000585953 RNF166Q96A37 237 aaPredicted RBP6.55□□□□□ -1.36
RPRD1A-204ENST00000585953 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP6.54□□□□□ -1.363e-7■□□□□ 9.9
RPRD1A-204ENST00000585953 RIOK3O14730 519 aaKnown RBP6.53□□□□□ -1.36
RPRD1A-204ENST00000585953 HOXB1P14653 301 aaPredicted RBP6.53□□□□□ -1.36
RPRD1A-204ENST00000585953 ILDR1Q86SU0 546 aaPredicted RBP6.52□□□□□ -1.37
RPRD1A-204ENST00000585953 HOXB3P14651 431 aaPredicted RBP6.51□□□□□ -1.37
RPRD1A-204ENST00000585953 MYT1LQ9UL68 1186 aa6.51□□□□□ -1.37
RPRD1A-204ENST00000585953 ZNF710Q8N1W2 664 aa6.5□□□□□ -1.37
RPRD1A-204ENST00000585953 ERBB3P21860 1342 aa6.5□□□□□ -1.37
RPRD1A-204ENST00000585953 DOK7Q18PE1 504 aa6.5□□□□□ -1.37
RPRD1A-204ENST00000585953 G3V3G9 751 aa6.49□□□□□ -1.37
RPRD1A-204ENST00000585953 VGFO15240 615 aaPredicted RBP6.49□□□□□ -1.37
RPRD1A-204ENST00000585953 PTGER2P43116 358 aa6.49□□□□□ -1.37
RPRD1A-204ENST00000585953 TAOK2Q9UL54 1235 aa6.49□□□□□ -1.37
RPRD1A-204ENST00000585953 CHGAP10645 457 aaKnown RBP6.49□□□□□ -1.37
RPRD1A-204ENST00000585953 HS6ST3Q8IZP7 471 aa6.47□□□□□ -1.37
RPRD1A-204ENST00000585953 PSEN1P49768 467 aa6.47□□□□□ -1.37
RPRD1A-204ENST00000585953 RIMBP2O15034 1052 aa6.46□□□□□ -1.37
RPRD1A-204ENST00000585953 BOLA1Q9Y3E2 137 aa6.46□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 68.6 ms