RNA–Protein interactions for RNA: ENST00000585315.5

CDH8-214, Transcript of cadherin 8, humanhuman

TSL 5

Gene CDH8, Length 9,076 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH8-214ENST00000585315 TIMELESSQ9UNS1 1208 aa9.61□□□□□ -0.87
CDH8-214ENST00000585315 SCRIBQ14160 1630 aa9.61□□□□□ -0.87
CDH8-214ENST00000585315 CHMP4BQ9H444 224 aaKnown RBP9.6□□□□□ -0.87
CDH8-214ENST00000585315 STAG3Q9UJ98 1225 aa9.6□□□□□ -0.87
CDH8-214ENST00000585315 GOLGA3Q08378 1498 aa9.6□□□□□ -0.87
CDH8-214ENST00000585315 PPP4R2Q9NY27 417 aa9.58□□□□□ -0.88
CDH8-214ENST00000585315 CDK11BP21127 795 aaKnown RBP9.58□□□□□ -0.88
CDH8-214ENST00000585315 SALL2Q9Y467 1007 aaPredicted RBP9.57□□□□□ -0.88
CDH8-214ENST00000585315 NPM1P06748 294 aaKnown RBP eCLIP9.57□□□□□ -0.88
CDH8-214ENST00000585315 CFAP53Q96M91 514 aa9.56□□□□□ -0.88
CDH8-214ENST00000585315 MS4A1P11836 297 aa9.56□□□□□ -0.88
CDH8-214ENST00000585315 CEP162Q5TB80 1403 aa9.56□□□□□ -0.88
CDH8-214ENST00000585315 ARID3CA6NKF2 412 aa9.56□□□□□ -0.88
CDH8-214ENST00000585315 CHGAP10645 457 aaKnown RBP9.56□□□□□ -0.88
CDH8-214ENST00000585315 CASC1Q6TDU7 716 aa9.56□□□□□ -0.88
CDH8-214ENST00000585315 ZRSR1Q15695 479 aaKnown RBP9.54□□□□□ -0.88
CDH8-214ENST00000585315 TNIKQ9UKE5 1360 aa9.54□□□□□ -0.88
CDH8-214ENST00000585315 CHIC2Q9UKJ5 165 aa9.53□□□□□ -0.88
CDH8-214ENST00000585315 KNSTRNQ9Y448 316 aa9.53□□□□□ -0.88
CDH8-214ENST00000585315 NRDCO43847 1150 aa9.52□□□□□ -0.88
CDH8-214ENST00000585315 CFAP44Q96MT7 982 aa9.52□□□□□ -0.88
CDH8-214ENST00000585315 CEP164Q9UPV0 1460 aa9.52□□□□□ -0.88
CDH8-214ENST00000585315 NOP58Q9Y2X3 529 aaKnown RBP9.52□□□□□ -0.89
CDH8-214ENST00000585315 PTMAP06454 111 aaKnown RBP9.52□□□□□ -0.89
CDH8-214ENST00000585315 ARXQ96QS3 562 aa9.52□□□□□ -0.89
CDH8-214ENST00000585315 CCER2I3L3R5 266 aa9.5□□□□□ -0.89
CDH8-214ENST00000585315 KDM2AQ9Y2K7 1162 aa9.5□□□□□ -0.89
CDH8-214ENST00000585315 SUPT16HQ9Y5B9 1047 aaKnown RBP9.5□□□□□ -0.89
CDH8-214ENST00000585315 FTSJ3Q8IY81 847 aaKnown RBP9.49□□□□□ -0.89
CDH8-214ENST00000585315 IRX6P78412 446 aaPredicted RBP9.49□□□□□ -0.89
CDH8-214ENST00000585315 GRWD1Q9BQ67 446 aaKnown RBP eCLIP9.48□□□□□ -0.89
CDH8-214ENST00000585315 L1TD1Q5T7N2 865 aaKnown RBP9.48□□□□□ -0.89
CDH8-214ENST00000585315 DNTTIP2Q5QJE6 756 aaKnown RBP9.48□□□□□ -0.89
CDH8-214ENST00000585315 HAP1P54257 671 aaPredicted RBP9.48□□□□□ -0.89
CDH8-214ENST00000585315 KIF27Q86VH2 1401 aa9.47□□□□□ -0.89
CDH8-214ENST00000585315 FHAD1B1AJZ9 1412 aa9.47□□□□□ -0.89
CDH8-214ENST00000585315 GOLGA6L6A8MZA4 724 aa9.47□□□□□ -0.89
CDH8-214ENST00000585315 NUDCQ9Y266 331 aa9.47□□□□□ -0.89
CDH8-214ENST00000585315 WRNQ14191 1432 aaPredicted RBP eCLIP9.46□□□□□ -0.9
CDH8-214ENST00000585315 ARID4BQ4LE39 1312 aaPredicted RBP9.46□□□□□ -0.9
CDH8-214ENST00000585315 PLEKHD1A6NEE1 506 aa9.46□□□□□ -0.9
CDH8-214ENST00000585315 PNNQ9H307 717 aaKnown RBP9.45□□□□□ -0.9
CDH8-214ENST00000585315 CHAF1AQ13111 956 aaPredicted RBP9.45□□□□□ -0.9
CDH8-214ENST00000585315 PTMSP20962 102 aa9.45□□□□□ -0.9
CDH8-214ENST00000585315 CARD11Q9BXL7 1154 aa9.44□□□□□ -0.9
CDH8-214ENST00000585315 NAP1L5Q96NT1 182 aaPredicted RBP9.43□□□□□ -0.9
CDH8-214ENST00000585315 RRP7BPQ9NSQ0 103 aa9.43□□□□□ -0.9
CDH8-214ENST00000585315 MAPK8IP3Q9UPT6 1336 aa9.43□□□□□ -0.9
CDH8-214ENST00000585315 CCNB3Q8WWL7 1395 aa9.42□□□□□ -0.9
CDH8-214ENST00000585315 CHMP7Q8WUX9 453 aaPredicted RBP9.42□□□□□ -0.9
CDH8-214ENST00000585315 CFDP1Q9UEE9 299 aaPredicted RBP9.41□□□□□ -0.9
CDH8-214ENST00000585315 HIRIP3Q9BW71 556 aaPredicted RBP9.41□□□□□ -0.9
CDH8-214ENST00000585315 HSCBQ8IWL3 235 aa9.4□□□□□ -0.91
CDH8-214ENST00000585315 MSNP26038 577 aaKnown RBP9.39□□□□□ -0.91
CDH8-214ENST00000585315 RB1CC1Q8TDY2 1594 aa9.39□□□□□ -0.91
CDH8-214ENST00000585315 HSP90AB1P08238 724 aaKnown RBP9.38□□□□□ -0.91
CDH8-214ENST00000585315 MYO15BQ96JP2 1530 aa9.38□□□□□ -0.91
CDH8-214ENST00000585315 RGS3P49796 1198 aa9.38□□□□□ -0.91
CDH8-214ENST00000585315 PPP1R15AO75807 674 aaPredicted RBP9.37□□□□□ -0.91
CDH8-214ENST00000585315 TCERG1O14776 1098 aaKnown RBP9.37□□□□□ -0.91
CDH8-214ENST00000585315 MCCP23508 829 aa9.36□□□□□ -0.91
CDH8-214ENST00000585315 RBM19Q9Y4C8 960 aaKnown RBP9.36□□□□□ -0.91
CDH8-214ENST00000585315 LAS1LQ9Y4W2 734 aaKnown RBP9.36□□□□□ -0.91
CDH8-214ENST00000585315 GOLGA6L4A6NEF3 574 aa9.36□□□□□ -0.91
CDH8-214ENST00000585315 CHMP4AQ9BY43 222 aa9.36□□□□□ -0.91
CDH8-214ENST00000585315 NACADO15069 1562 aa9.36□□□□□ -0.91
CDH8-214ENST00000585315 TMF1P82094 1093 aa9.36□□□□□ -0.91
CDH8-214ENST00000585315 GBP4Q96PP9 640 aa9.36□□□□□ -0.91
CDH8-214ENST00000585315 USP35Q9P2H5 1018 aa9.35□□□□□ -0.91
CDH8-214ENST00000585315 DEKP35659 375 aaKnown RBP9.34□□□□□ -0.91
CDH8-214ENST00000585315 RGL3Q3MIN7 710 aa9.34□□□□□ -0.91
CDH8-214ENST00000585315 B4GALNT3Q6L9W6 998 aa9.34□□□□□ -0.91
CDH8-214ENST00000585315 BAZ1AQ9NRL2 1556 aaPredicted RBP9.34□□□□□ -0.91
CDH8-214ENST00000585315 IPO8O15397 1037 aaKnown RBP9.34□□□□□ -0.91
CDH8-214ENST00000585315 VPS8Q8N3P4 1428 aa9.33□□□□□ -0.92
CDH8-214ENST00000585315 FGD1P98174 961 aa9.33□□□□□ -0.92
CDH8-214ENST00000585315 BAZ1BQ9UIG0 1483 aaKnown RBP9.32□□□□□ -0.92
CDH8-214ENST00000585315 FRAT1Q92837 279 aaPredicted RBP9.32□□□□□ -0.92
CDH8-214ENST00000585315 KIAA2012Q0VF49 1180 aa9.32□□□□□ -0.92
CDH8-214ENST00000585315 SYAP1Q96A49 352 aaPredicted RBP9.32□□□□□ -0.92
CDH8-214ENST00000585315 RALBP1Q15311 655 aa9.32□□□□□ -0.92
CDH8-214ENST00000585315 SETD5Q9C0A6 1442 aa9.32□□□□□ -0.92
CDH8-214ENST00000585315 CALD1Q05682 793 aaKnown RBP9.31□□□□□ -0.92
CDH8-214ENST00000585315 KCNJ4P48050 445 aa9.31□□□□□ -0.92
CDH8-214ENST00000585315 PDE3BQ13370 1112 aa9.31□□□□□ -0.92
CDH8-214ENST00000585315 PLCB2Q00722 1185 aa9.3□□□□□ -0.92
CDH8-214ENST00000585315 KTN1Q86UP2 1357 aaKnown RBP9.3□□□□□ -0.92
CDH8-214ENST00000585315 HTATSF1O43719 755 aaKnown RBP9.3□□□□□ -0.92
CDH8-214ENST00000585315 PHLDB1Q86UU1 1377 aa9.3□□□□□ -0.92
CDH8-214ENST00000585315 ROCK2O75116 1388 aaKnown RBP9.29□□□□□ -0.92
CDH8-214ENST00000585315 NEUROD2Q15784 382 aa9.29□□□□□ -0.92
CDH8-214ENST00000585315 RWDD1Q9H446 243 aaPredicted RBP9.29□□□□□ -0.92
CDH8-214ENST00000585315 HDAC5Q9UQL6 1122 aa9.28□□□□□ -0.92
CDH8-214ENST00000585315 KANK1Q14678 1352 aa9.28□□□□□ -0.92
CDH8-214ENST00000585315 SIN3AQ96ST3 1273 aa9.28□□□□□ -0.92
CDH8-214ENST00000585315 CCDC34Q96HJ3 373 aa9.27□□□□□ -0.93
CDH8-214ENST00000585315 POGKQ9P215 609 aa9.27□□□□□ -0.93
CDH8-214ENST00000585315 RCAN3Q9UKA8 241 aa9.27□□□□□ -0.93
CDH8-214ENST00000585315 IPO9Q96P70 1041 aaKnown RBP9.27□□□□□ -0.93
CDH8-214ENST00000585315 ARHGAP35Q9NRY4 1499 aa9.27□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms