RNA–Protein interactions for RNA: ENST00000584089.1

SKA2-210, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

TSL 4

Gene SKA2, Length 229 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-210ENST00000584089 PKD2Q13563 968 aa10.93□□□□□ -0.66
SKA2-210ENST00000584089 HAX1O00165 279 aa10.91□□□□□ -0.66
SKA2-210ENST00000584089 TRIM41Q8WV44 630 aa10.91□□□□□ -0.66
SKA2-210ENST00000584089 ZRANB1Q9UGI0 708 aa10.88□□□□□ -0.67
SKA2-210ENST00000584089 CCDC61Q9Y6R9 512 aa10.88□□□□□ -0.67
SKA2-210ENST00000584089 ECM2O94769 699 aaPredicted RBP10.85□□□□□ -0.67
SKA2-210ENST00000584089 CHRM1P11229 460 aaPredicted RBP10.85□□□□□ -0.67
SKA2-210ENST00000584089 ZNF579Q8NAF0 562 aaKnown RBP10.82□□□□□ -0.68
SKA2-210ENST00000584089 PYGBP11216 843 aa10.81□□□□□ -0.68
SKA2-210ENST00000584089 EVX2Q03828 476 aa10.8□□□□□ -0.68
SKA2-210ENST00000584089 KIF12Q96FN5 646 aa10.77□□□□□ -0.69
SKA2-210ENST00000584089 PHF12Q96QT6 1004 aa10.77□□□□□ -0.69
SKA2-210ENST00000584089 SGIP1Q9BQI5 828 aa10.75□□□□□ -0.69
SKA2-210ENST00000584089 CLCN6P51797 869 aa10.74□□□□□ -0.69
SKA2-210ENST00000584089 RGL2O15211 777 aa10.73□□□□□ -0.69
SKA2-210ENST00000584089 MAP3K13O43283 966 aa10.73□□□□□ -0.69
SKA2-210ENST00000584089 ZNF467Q7Z7K2 595 aaPredicted RBP10.71□□□□□ -0.69
SKA2-210ENST00000584089 RNF25Q96BH1 459 aaPredicted RBP10.71□□□□□ -0.69
SKA2-210ENST00000584089 PCDHB13Q9Y5F0 798 aa10.71□□□□□ -0.69
SKA2-210ENST00000584089 RIOK3O14730 519 aaKnown RBP10.7□□□□□ -0.7
SKA2-210ENST00000584089 TAOK2Q9UL54 1235 aa10.68□□□□□ -0.7
SKA2-210ENST00000584089 IFNL1Q8IU54 200 aa10.66□□□□□ -0.7
SKA2-210ENST00000584089 MS4A3Q96HJ5 214 aa10.66□□□□□ -0.7
SKA2-210ENST00000584089 PCDHB8Q9UN66 801 aa10.66□□□□□ -0.7
SKA2-210ENST00000584089 VGFO15240 615 aaPredicted RBP10.64□□□□□ -0.71
SKA2-210ENST00000584089 DCAF8L2P0C7V8 631 aa10.63□□□□□ -0.71
SKA2-210ENST00000584089 SP7Q8TDD2 431 aaPredicted RBP10.63□□□□□ -0.71
SKA2-210ENST00000584089 GABBR2O75899 941 aa10.62□□□□□ -0.71
SKA2-210ENST00000584089 GALR2O43603 387 aaPredicted RBP10.61□□□□□ -0.71
SKA2-210ENST00000584089 PDAP1Q13442 181 aaKnown RBP10.61□□□□□ -0.71
SKA2-210ENST00000584089 PSEN1P49768 467 aa10.58□□□□□ -0.72
SKA2-210ENST00000584089 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP10.56□□□□□ -0.72
SKA2-210ENST00000584089 ZFP91Q96JP5 570 aaPredicted RBP10.56□□□□□ -0.72
SKA2-210ENST00000584089 TIE1P35590 1138 aa10.55□□□□□ -0.72
SKA2-210ENST00000584089 CHGAP10645 457 aaKnown RBP10.54□□□□□ -0.72
SKA2-210ENST00000584089 TRPC6Q9Y210 931 aa10.54□□□□□ -0.72
SKA2-210ENST00000584089 STK25O00506 426 aa10.53□□□□□ -0.72
SKA2-210ENST00000584089 HS6ST3Q8IZP7 471 aa10.53□□□□□ -0.72
SKA2-210ENST00000584089 TMEM106CQ9BVX2 250 aa10.51□□□□□ -0.73
SKA2-210ENST00000584089 BCL11BQ9C0K0 894 aaPredicted RBP10.51□□□□□ -0.73
SKA2-210ENST00000584089 BMP2KQ9NSY1 1161 aaPredicted RBP10.49□□□□□ -0.73
SKA2-210ENST00000584089 STK24Q9Y6E0 443 aa10.49□□□□□ -0.73
SKA2-210ENST00000584089 TTLL13PA6NNM8 815 aa10.48□□□□□ -0.73
SKA2-210ENST00000584089 DCBLD2Q96PD2 775 aa10.47□□□□□ -0.73
SKA2-210ENST00000584089 DNAJC5Q9H3Z4 198 aa10.47□□□□□ -0.73
SKA2-210ENST00000584089 ASTLQ6HA08 431 aaPredicted RBP10.46□□□□□ -0.73
SKA2-210ENST00000584089 ATMINO43313 823 aaPredicted RBP10.45□□□□□ -0.74
SKA2-210ENST00000584089 BBXQ8WY36 941 aaPredicted RBP10.44□□□□□ -0.74
SKA2-210ENST00000584089 CABP2Q9NPB3 220 aa10.43□□□□□ -0.74
SKA2-210ENST00000584089 ATN1P54259 1190 aaPredicted RBP10.42□□□□□ -0.74
SKA2-210ENST00000584089 GOLGA2Q08379 1002 aa10.41□□□□□ -0.74
SKA2-210ENST00000584089 TRIM35Q9UPQ4 493 aa10.41□□□□□ -0.74
SKA2-210ENST00000584089 POTEIP0CG38 1075 aa10.39□□□□□ -0.75
SKA2-210ENST00000584089 EFCAB3Q8N7B9 438 aa10.38□□□□□ -0.75
SKA2-210ENST00000584089 MKRN3Q13064 507 aaKnown RBP10.37□□□□□ -0.75
SKA2-210ENST00000584089 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.37□□□□□ -0.75
SKA2-210ENST00000584089 SOX12O15370 315 aa10.36□□□□□ -0.75
SKA2-210ENST00000584089 NKX1-1Q15270 411 aaPredicted RBP10.36□□□□□ -0.75
SKA2-210ENST00000584089 IER5LQ5T953 404 aa10.36□□□□□ -0.75
SKA2-210ENST00000584089 PELP1Q8IZL8 1130 aaKnown RBP10.35□□□□□ -0.75
SKA2-210ENST00000584089 SLC39A7Q92504 469 aa10.33□□□□□ -0.76
SKA2-210ENST00000584089 RYDENQ9NUL5 291 aaKnown RBP10.32□□□□□ -0.76
SKA2-210ENST00000584089 C7P10643 843 aa10.31□□□□□ -0.76
SKA2-210ENST00000584089 NLRP6P59044 892 aa10.31□□□□□ -0.76
SKA2-210ENST00000584089 MFRPQ9BY79 579 aa10.31□□□□□ -0.76
SKA2-210ENST00000584089 ILDR1Q86SU0 546 aaPredicted RBP10.29□□□□□ -0.76
SKA2-210ENST00000584089 SPRYD3Q8NCJ5 442 aa10.29□□□□□ -0.76
SKA2-210ENST00000584089 PHF8Q9UPP1 1060 aa10.29□□□□□ -0.76
SKA2-210ENST00000584089 GTPBP6O43824 516 aaPredicted RBP10.28□□□□□ -0.76
SKA2-210ENST00000584089 FBXO22Q8NEZ5 403 aa10.28□□□□□ -0.76
SKA2-210ENST00000584089 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP10.28□□□□□ -0.76
SKA2-210ENST00000584089 IRX5P78411 483 aaPredicted RBP10.27□□□□□ -0.77
SKA2-210ENST00000584089 PAXIP1Q6ZW49 1069 aaPredicted RBP10.27□□□□□ -0.77
SKA2-210ENST00000584089 OCEL1Q9H607 264 aa10.27□□□□□ -0.77
SKA2-210ENST00000584089 METRNQ9UJH8 293 aa10.26□□□□□ -0.77
SKA2-210ENST00000584089 PLCB2Q00722 1185 aa10.25□□□□□ -0.77
SKA2-210ENST00000584089 SEC24BO95487 1268 aa10.24□□□□□ -0.77
SKA2-210ENST00000584089 PLCG2P16885 1265 aa10.24□□□□□ -0.77
SKA2-210ENST00000584089 CFAP44Q96MT7 982 aa10.24□□□□□ -0.77
SKA2-210ENST00000584089 MS4A4AQ96JQ5 239 aa10.23□□□□□ -0.77
SKA2-210ENST00000584089 PDCD7Q8N8D1 485 aaKnown RBP10.22□□□□□ -0.77
SKA2-210ENST00000584089 COLQQ9Y215 455 aaPredicted RBP10.22□□□□□ -0.77
SKA2-210ENST00000584089 POTEFA5A3E0 1075 aa10.2□□□□□ -0.78
SKA2-210ENST00000584089 DPY19L2Q6NUT2 758 aa10.17□□□□□ -0.78
SKA2-210ENST00000584089 PPP1R37O75864 691 aa10.15□□□□□ -0.78
SKA2-210ENST00000584089 L3MBTL3Q96JM7 780 aaPredicted RBP10.14□□□□□ -0.79
SKA2-210ENST00000584089 G3V3G9 751 aa10.11□□□□□ -0.79
SKA2-210ENST00000584089 BOLA1Q9Y3E2 137 aa10.11□□□□□ -0.79
SKA2-210ENST00000584089 MICALL2Q8IY33 904 aa10.09□□□□□ -0.79
SKA2-210ENST00000584089 TMEM121BQ9BXQ6 578 aaPredicted RBP10.09□□□□□ -0.79
SKA2-210ENST00000584089 HAP1P54257 671 aaPredicted RBP10.07□□□□□ -0.8
SKA2-210ENST00000584089 TSHZ2Q9NRE2 1034 aa10.07□□□□□ -0.8
SKA2-210ENST00000584089 POTEB2H3BUK9 544 aa10.05□□□□□ -0.8
SKA2-210ENST00000584089 POTEJP0CG39 1038 aa10.02□□□□□ -0.81
SKA2-210ENST00000584089 MAMSTRQ6ZN01 415 aa10.01□□□□□ -0.81
SKA2-210ENST00000584089 C3orf67Q6ZVT6 689 aa10.01□□□□□ -0.81
SKA2-210ENST00000584089 SLC24A1O60721 1099 aa10□□□□□ -0.81
SKA2-210ENST00000584089 CADPS2Q86UW7 1296 aa9.99□□□□□ -0.81
SKA2-210ENST00000584089 LHX8Q68G74 356 aa9.98□□□□□ -0.81
SKA2-210ENST00000584089 EIF2AK3Q9NZJ5 1116 aaKnown RBP9.98□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 7.7 ms