RNA–Protein interactions for RNA: ENST00000583962.1

CCDC144NL-AS1-218, CCDC144NL antisense RNA 1, humanhuman

TSL 1 (best)

Gene CCDC144NL-AS1, Length 3,352 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144NL-AS1-218ENST00000583962 KIF21AQ7Z4S6 1674 aa15.94■□□□□ 0.14
CCDC144NL-AS1-218ENST00000583962 BCL11BQ9C0K0 894 aaPredicted RBP15.93■□□□□ 0.14
CCDC144NL-AS1-218ENST00000583962 ZMYND15Q9H091 742 aa15.93■□□□□ 0.14
CCDC144NL-AS1-218ENST00000583962 THOC2Q8NI27 1593 aaKnown RBP15.91■□□□□ 0.14
CCDC144NL-AS1-218ENST00000583962 MSH5O43196 834 aa15.91■□□□□ 0.14
CCDC144NL-AS1-218ENST00000583962 MIER1Q8N108 512 aa15.89■□□□□ 0.13
CCDC144NL-AS1-218ENST00000583962 CLSPNQ9HAW4 1339 aa15.88■□□□□ 0.13
CCDC144NL-AS1-218ENST00000583962 DNAJC5Q9H3Z4 198 aa15.87■□□□□ 0.13
CCDC144NL-AS1-218ENST00000583962 WDR62O43379 1518 aa15.81■□□□□ 0.12
CCDC144NL-AS1-218ENST00000583962 EHMT2Q96KQ7 1210 aa15.81■□□□□ 0.12
CCDC144NL-AS1-218ENST00000583962 FGD1P98174 961 aa15.79■□□□□ 0.12
CCDC144NL-AS1-218ENST00000583962 TRIM41Q8WV44 630 aa15.77■□□□□ 0.12
CCDC144NL-AS1-218ENST00000583962 ITGAEP38570 1179 aa15.76■□□□□ 0.11
CCDC144NL-AS1-218ENST00000583962 RBM10P98175 930 aaKnown RBP15.76■□□□□ 0.11
CCDC144NL-AS1-218ENST00000583962 RTL5Q5HYW3 569 aaPredicted RBP15.76■□□□□ 0.11
CCDC144NL-AS1-218ENST00000583962 ZNF316A6NFI3 1004 aaPredicted RBP15.75■□□□□ 0.11
CCDC144NL-AS1-218ENST00000583962 URB2Q14146 1524 aaKnown RBP15.75■□□□□ 0.11
CCDC144NL-AS1-218ENST00000583962 ABCC8Q09428 1581 aa15.71■□□□□ 0.11
CCDC144NL-AS1-218ENST00000583962 FKBP8Q14318 412 aa15.69■□□□□ 0.1
CCDC144NL-AS1-218ENST00000583962 TOPBP1Q92547 1522 aa15.66■□□□□ 0.1
CCDC144NL-AS1-218ENST00000583962 AAMPQ13685 434 aa15.65■□□□□ 0.1
CCDC144NL-AS1-218ENST00000583962 NCBP3Q53F19 620 aaKnown RBP15.65■□□□□ 0.1
CCDC144NL-AS1-218ENST00000583962 IFT140Q96RY7 1462 aa15.64■□□□□ 0.09
CCDC144NL-AS1-218ENST00000583962 DNMBPQ6XZF7 1577 aa15.61■□□□□ 0.09
CCDC144NL-AS1-218ENST00000583962 PAXIP1Q6ZW49 1069 aaPredicted RBP15.61■□□□□ 0.09
CCDC144NL-AS1-218ENST00000583962 OSCARQ8IYS5 282 aa15.59■□□□□ 0.09
CCDC144NL-AS1-218ENST00000583962 DHX37Q8IY37 1157 aaKnown RBP15.56■□□□□ 0.08
CCDC144NL-AS1-218ENST00000583962 SOGA1O94964 1423 aa15.55■□□□□ 0.08
CCDC144NL-AS1-218ENST00000583962 ZNF608Q9ULD9 1512 aaPredicted RBP15.54■□□□□ 0.08
CCDC144NL-AS1-218ENST00000583962 TAF7LQ5H9L4 462 aa15.53■□□□□ 0.08
CCDC144NL-AS1-218ENST00000583962 FBLN2P98095 1184 aa15.53■□□□□ 0.08
CCDC144NL-AS1-218ENST00000583962 POLA1P09884 1462 aaPredicted RBP15.52■□□□□ 0.08
CCDC144NL-AS1-218ENST00000583962 PLPPR3Q6T4P5 718 aa15.51■□□□□ 0.07
CCDC144NL-AS1-218ENST00000583962 TDRD9Q8NDG6 1382 aaKnown RBP15.49■□□□□ 0.07
CCDC144NL-AS1-218ENST00000583962 WDR97A6NE52 1622 aa15.49■□□□□ 0.07
CCDC144NL-AS1-218ENST00000583962 AQRO60306 1485 aaKnown RBP eCLIP15.49■□□□□ 0.07
CCDC144NL-AS1-218ENST00000583962 FGD5Q6ZNL6 1462 aa15.49■□□□□ 0.07
CCDC144NL-AS1-218ENST00000583962 RAD54L2Q9Y4B4 1467 aa15.49■□□□□ 0.07
CCDC144NL-AS1-218ENST00000583962 FANCIQ9NVI1 1328 aa15.47■□□□□ 0.07
CCDC144NL-AS1-218ENST00000583962 CDK11AQ9UQ88 783 aaPredicted RBP15.46■□□□□ 0.07
CCDC144NL-AS1-218ENST00000583962 CUX1P39880 1505 aa15.46■□□□□ 0.07
CCDC144NL-AS1-218ENST00000583962 HAP1P54257 671 aaPredicted RBP15.44■□□□□ 0.06
CCDC144NL-AS1-218ENST00000583962 RSPH6AQ9H0K4 717 aa15.44■□□□□ 0.06
CCDC144NL-AS1-218ENST00000583962 WRNQ14191 1432 aaPredicted RBP eCLIP15.43■□□□□ 0.06
CCDC144NL-AS1-218ENST00000583962 CHMP7Q8WUX9 453 aaPredicted RBP15.42■□□□□ 0.06
CCDC144NL-AS1-218ENST00000583962 EIF4G3O43432 1585 aaKnown RBP15.41■□□□□ 0.06
CCDC144NL-AS1-218ENST00000583962 TARBP1Q13395 1621 aaKnown RBP15.4■□□□□ 0.06
CCDC144NL-AS1-218ENST00000583962 ARXQ96QS3 562 aa15.4■□□□□ 0.06
CCDC144NL-AS1-218ENST00000583962 BRPF3Q9ULD4 1205 aa15.4■□□□□ 0.06
CCDC144NL-AS1-218ENST00000583962 NOP58Q9Y2X3 529 aaKnown RBP15.39■□□□□ 0.05
CCDC144NL-AS1-218ENST00000583962 NAP1L5Q96NT1 182 aaPredicted RBP15.37■□□□□ 0.05
CCDC144NL-AS1-218ENST00000583962 HSP90AA2PQ14568 343 aaPredicted RBP15.36■□□□□ 0.05
CCDC144NL-AS1-218ENST00000583962 GRIN2BQ13224 1484 aa15.35■□□□□ 0.05
CCDC144NL-AS1-218ENST00000583962 CHMP4BQ9H444 224 aaKnown RBP15.34■□□□□ 0.05
CCDC144NL-AS1-218ENST00000583962 TULP1O00294 542 aaPredicted RBP15.33■□□□□ 0.05
CCDC144NL-AS1-218ENST00000583962 GAPVD1Q14C86 1478 aa15.33■□□□□ 0.04
CCDC144NL-AS1-218ENST00000583962 CHMP4AQ9BY43 222 aa15.33■□□□□ 0.04
CCDC144NL-AS1-218ENST00000583962 SNAPC4Q5SXM2 1469 aa15.32■□□□□ 0.04
CCDC144NL-AS1-218ENST00000583962 PAK3O75914 559 aaPredicted RBP15.31■□□□□ 0.04
CCDC144NL-AS1-218ENST00000583962 NEFMP07197 916 aa15.3■□□□□ 0.04
CCDC144NL-AS1-218ENST00000583962 ABCA10Q8WWZ4 1543 aa15.3■□□□□ 0.04
CCDC144NL-AS1-218ENST00000583962 NAP1L2Q9ULW6 460 aaPredicted RBP15.3■□□□□ 0.04
CCDC144NL-AS1-218ENST00000583962 BBXQ8WY36 941 aaPredicted RBP15.29■□□□□ 0.04
CCDC144NL-AS1-218ENST00000583962 MAGI1Q96QZ7 1491 aaPredicted RBP15.29■□□□□ 0.04
CCDC144NL-AS1-218ENST00000583962 TOP2BQ02880 1626 aa15.27■□□□□ 0.04
CCDC144NL-AS1-218ENST00000583962 SYNJ1O43426 1573 aa15.26■□□□□ 0.03
CCDC144NL-AS1-218ENST00000583962 IRX6P78412 446 aaPredicted RBP15.25■□□□□ 0.03
CCDC144NL-AS1-218ENST00000583962 SYNJ2O15056 1496 aa15.24■□□□□ 0.03
CCDC144NL-AS1-218ENST00000583962 CYB5RLQ6IPT4 315 aa15.23■□□□□ 0.03
CCDC144NL-AS1-218ENST00000583962 BIVM-ERCC5R4GMW8 1640 aa15.22■□□□□ 0.03
CCDC144NL-AS1-218ENST00000583962 ARID4BQ4LE39 1312 aaPredicted RBP15.22■□□□□ 0.03
CCDC144NL-AS1-218ENST00000583962 CHD1O14646 1710 aa15.21■□□□□ 0.03
CCDC144NL-AS1-218ENST00000583962 ZBTB47Q9UFB7 747 aaPredicted RBP15.18■□□□□ 0.02
CCDC144NL-AS1-218ENST00000583962 ARHGEF11O15085 1522 aa15.18■□□□□ 0.02
CCDC144NL-AS1-218ENST00000583962 KCNH8Q96L42 1107 aa15.18■□□□□ 0.02
CCDC144NL-AS1-218ENST00000583962 RGS3P49796 1198 aa15.17■□□□□ 0.02
CCDC144NL-AS1-218ENST00000583962 HSP90AA1P07900 732 aaKnown RBP15.16■□□□□ 0.02
CCDC144NL-AS1-218ENST00000583962 ABCA5Q8WWZ7 1642 aa15.16■□□□□ 0.02
CCDC144NL-AS1-218ENST00000583962 FHAD1B1AJZ9 1412 aa15.16■□□□□ 0.02
CCDC144NL-AS1-218ENST00000583962 KIF27Q86VH2 1401 aa15.15■□□□□ 0.02
CCDC144NL-AS1-218ENST00000583962 BRD2P25440 801 aaKnown RBP15.15■□□□□ 0.02
CCDC144NL-AS1-218ENST00000583962 AMER1Q5JTC6 1135 aaPredicted RBP15.15■□□□□ 0.02
CCDC144NL-AS1-218ENST00000583962 LAS1LQ9Y4W2 734 aaKnown RBP15.15■□□□□ 0.02
CCDC144NL-AS1-218ENST00000583962 PBRM1Q86U86 1689 aa15.14■□□□□ 0.01
CCDC144NL-AS1-218ENST00000583962 USP35Q9P2H5 1018 aa15.13■□□□□ 0.01
CCDC144NL-AS1-218ENST00000583962 RIMBP3CA6NJZ7 1639 aa15.13■□□□□ 0.01
CCDC144NL-AS1-218ENST00000583962 RIMBP3BA6NNM3 1639 aa15.13■□□□□ 0.01
CCDC144NL-AS1-218ENST00000583962 RIMBP3Q9UFD9 1639 aa15.13■□□□□ 0.01
CCDC144NL-AS1-218ENST00000583962 ZNF326Q5BKZ1 582 aaKnown RBP15.12■□□□□ 0.01
CCDC144NL-AS1-218ENST00000583962 GRIN2AQ12879 1464 aa15.12■□□□□ 0.01
CCDC144NL-AS1-218ENST00000583962 PLCD3Q8N3E9 789 aa15.11■□□□□ 0.01
CCDC144NL-AS1-218ENST00000583962 ERICH3Q5RHP9 1530 aa15.11■□□□□ 0.01
CCDC144NL-AS1-218ENST00000583962 ANP32AP39687 249 aaKnown RBP15.1■□□□□ 0.01
CCDC144NL-AS1-218ENST00000583962 CANXP27824 592 aaKnown RBP15.1■□□□□ 0.01
CCDC144NL-AS1-218ENST00000583962 C11orf95C9JLR9 678 aaPredicted RBP15.08■□□□□ 0
CCDC144NL-AS1-218ENST00000583962 ADAMTS12P58397 1594 aa15.07■□□□□ 0
CCDC144NL-AS1-218ENST00000583962 C14orf37Q86TY3 774 aa15.07■□□□□ 0
CCDC144NL-AS1-218ENST00000583962 RRP9O43818 475 aaKnown RBP15.07■□□□□ 0
CCDC144NL-AS1-218ENST00000583962 CLASP1Q7Z460 1538 aa15.05■□□□□ 0
CCDC144NL-AS1-218ENST00000583962 TRHP20396 242 aaPredicted RBP15.05■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 8.6 ms