RNA–Protein interactions for RNA: ENST00000583962.1

CCDC144NL-AS1-218, CCDC144NL antisense RNA 1, humanhuman

TSL 1 (best)

Gene CCDC144NL-AS1, Length 3,352 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144NL-AS1-218ENST00000583962 NISCHQ9Y2I1 1504 aa21.39■■□□□ 1.02
CCDC144NL-AS1-218ENST00000583962 PELP1Q8IZL8 1130 aaKnown RBP19.93■□□□□ 0.78
CCDC144NL-AS1-218ENST00000583962 MYT1Q01538 1121 aa19.57■□□□□ 0.72
CCDC144NL-AS1-218ENST00000583962 CCDC180Q9P1Z9 1646 aa18.97■□□□□ 0.63
CCDC144NL-AS1-218ENST00000583962 ABCC9O60706 1549 aa18.9■□□□□ 0.62
CCDC144NL-AS1-218ENST00000583962 PRKCSHP14314 528 aaPredicted RBP18.72■□□□□ 0.59
CCDC144NL-AS1-218ENST00000583962 TTBK1Q5TCY1 1321 aaPredicted RBP18.62■□□□□ 0.57
CCDC144NL-AS1-218ENST00000583962 HRCP23327 699 aa18.4■□□□□ 0.54
CCDC144NL-AS1-218ENST00000583962 BCL11AQ9H165 835 aa18.32■□□□□ 0.52
CCDC144NL-AS1-218ENST00000583962 PPARGC1BQ86YN6 1023 aaKnown RBP18.31■□□□□ 0.52
CCDC144NL-AS1-218ENST00000583962 SCAF1Q9H7N4 1312 aaKnown RBP18.3■□□□□ 0.52
CCDC144NL-AS1-218ENST00000583962 DCAF8L2P0C7V8 631 aa18.28■□□□□ 0.52
CCDC144NL-AS1-218ENST00000583962 ERICH6Q7L0X2 663 aa18.24■□□□□ 0.51
CCDC144NL-AS1-218ENST00000583962 FAM9AQ8IZU1 332 aaPredicted RBP18.07■□□□□ 0.48
CCDC144NL-AS1-218ENST00000583962 RB1CC1Q8TDY2 1594 aa18.04■□□□□ 0.48
CCDC144NL-AS1-218ENST00000583962 SLC24A1O60721 1099 aa18.02■□□□□ 0.48
CCDC144NL-AS1-218ENST00000583962 MYO15BQ96JP2 1530 aa18.01■□□□□ 0.47
CCDC144NL-AS1-218ENST00000583962 NACADO15069 1562 aa17.97■□□□□ 0.47
CCDC144NL-AS1-218ENST00000583962 APLP2Q06481 763 aa17.86■□□□□ 0.45
CCDC144NL-AS1-218ENST00000583962 DCAF1Q9Y4B6 1507 aa17.84■□□□□ 0.45
CCDC144NL-AS1-218ENST00000583962 CENPBP07199 599 aaPredicted RBP17.76■□□□□ 0.43
CCDC144NL-AS1-218ENST00000583962 ZCCHC6Q5VYS8 1495 aaKnown RBP17.76■□□□□ 0.43
CCDC144NL-AS1-218ENST00000583962 PCGF6Q9BYE7 350 aa17.74■□□□□ 0.43
CCDC144NL-AS1-218ENST00000583962 PABPN1Q86U42 306 aaKnown RBP eCLIP17.71■□□□□ 0.43
CCDC144NL-AS1-218ENST00000583962 GTF3C3Q9Y5Q9 886 aa17.57■□□□□ 0.4
CCDC144NL-AS1-218ENST00000583962 DNAJC5BQ9UF47 199 aa17.42■□□□□ 0.38
CCDC144NL-AS1-218ENST00000583962 ACIN1Q9UKV3 1341 aaKnown RBP17.41■□□□□ 0.38
CCDC144NL-AS1-218ENST00000583962 SCRIBQ14160 1630 aa17.41■□□□□ 0.38
CCDC144NL-AS1-218ENST00000583962 UNC13AQ9UPW8 1703 aa17.41■□□□□ 0.38
CCDC144NL-AS1-218ENST00000583962 NEUROD1Q13562 356 aa17.37■□□□□ 0.37
CCDC144NL-AS1-218ENST00000583962 BICRAQ9NZM4 1560 aa17.37■□□□□ 0.37
CCDC144NL-AS1-218ENST00000583962 EIF5BO60841 1220 aaKnown RBP17.34■□□□□ 0.37
CCDC144NL-AS1-218ENST00000583962 SHROOM4Q9ULL8 1493 aa17.3■□□□□ 0.36
CCDC144NL-AS1-218ENST00000583962 ANP32EQ9BTT0 268 aa17.25■□□□□ 0.35
CCDC144NL-AS1-218ENST00000583962 CSRNP3Q8WYN3 585 aa17.22■□□□□ 0.35
CCDC144NL-AS1-218ENST00000583962 ANO8Q9HCE9 1232 aaPredicted RBP17.14■□□□□ 0.33
CCDC144NL-AS1-218ENST00000583962 PLEKHG5O94827 1062 aa17.12■□□□□ 0.33
CCDC144NL-AS1-218ENST00000583962 DAXXQ9UER7 740 aaPredicted RBP17.12■□□□□ 0.33
CCDC144NL-AS1-218ENST00000583962 EIF4G1Q04637 1599 aaKnown RBP17.01■□□□□ 0.31
CCDC144NL-AS1-218ENST00000583962 CECR2Q9BXF3 1484 aa16.98■□□□□ 0.31
CCDC144NL-AS1-218ENST00000583962 CC2D2AQ9P2K1 1620 aa16.97■□□□□ 0.31
CCDC144NL-AS1-218ENST00000583962 ZEB1P37275 1124 aaPredicted RBP16.91■□□□□ 0.3
CCDC144NL-AS1-218ENST00000583962 CCDC136Q96JN2 1154 aa16.9■□□□□ 0.3
CCDC144NL-AS1-218ENST00000583962 YTHDC1Q96MU7 727 aaKnown RBP16.83■□□□□ 0.28
CCDC144NL-AS1-218ENST00000583962 PODXL2Q9NZ53 605 aa16.8■□□□□ 0.28
CCDC144NL-AS1-218ENST00000583962 UBE2Q2Q8WVN8 375 aa16.73■□□□□ 0.27
CCDC144NL-AS1-218ENST00000583962 SALL2Q9Y467 1007 aaPredicted RBP16.69■□□□□ 0.26
CCDC144NL-AS1-218ENST00000583962 SUPT5HO00267 1087 aaKnown RBP16.69■□□□□ 0.26
CCDC144NL-AS1-218ENST00000583962 PKNOX2Q96KN3 472 aa16.64■□□□□ 0.25
CCDC144NL-AS1-218ENST00000583962 BAZ1AQ9NRL2 1556 aaPredicted RBP16.62■□□□□ 0.25
CCDC144NL-AS1-218ENST00000583962 NCAPD3P42695 1498 aa16.61■□□□□ 0.25
CCDC144NL-AS1-218ENST00000583962 ZBTB4Q9P1Z0 1013 aaPredicted RBP16.6■□□□□ 0.25
CCDC144NL-AS1-218ENST00000583962 TRIM26Q12899 539 aaPredicted RBP16.6■□□□□ 0.25
CCDC144NL-AS1-218ENST00000583962 ATAD2BQ9ULI0 1458 aa16.6■□□□□ 0.25
CCDC144NL-AS1-218ENST00000583962 SMARCA4P51532 1647 aa16.59■□□□□ 0.25
CCDC144NL-AS1-218ENST00000583962 SMARCA2P51531 1590 aa16.58■□□□□ 0.24
CCDC144NL-AS1-218ENST00000583962 BAZ1BQ9UIG0 1483 aaKnown RBP16.51■□□□□ 0.23
CCDC144NL-AS1-218ENST00000583962 DIEXFQ68CQ4 756 aaKnown RBP16.49■□□□□ 0.23
CCDC144NL-AS1-218ENST00000583962 MROH2BQ7Z745 1585 aa16.48■□□□□ 0.23
CCDC144NL-AS1-218ENST00000583962 TSHZ2Q9NRE2 1034 aa16.46■□□□□ 0.23
CCDC144NL-AS1-218ENST00000583962 HMGXB3Q12766 1538 aa16.46■□□□□ 0.22
CCDC144NL-AS1-218ENST00000583962 PEG3Q9GZU2 1588 aa16.43■□□□□ 0.22
CCDC144NL-AS1-218ENST00000583962 CHIC1Q5VXU3 224 aa16.37■□□□□ 0.21
CCDC144NL-AS1-218ENST00000583962 RTN4Q9NQC3 1192 aaKnown RBP16.37■□□□□ 0.21
CCDC144NL-AS1-218ENST00000583962 ERCC6Q03468 1493 aa16.37■□□□□ 0.21
CCDC144NL-AS1-218ENST00000583962 LOC105371045A0A1W2PR82 267 aa16.36■□□□□ 0.21
CCDC144NL-AS1-218ENST00000583962 AEBP2Q6ZN18 517 aaPredicted RBP16.32■□□□□ 0.2
CCDC144NL-AS1-218ENST00000583962 RSF1Q96T23 1441 aaPredicted RBP16.29■□□□□ 0.2
CCDC144NL-AS1-218ENST00000583962 DEKP35659 375 aaKnown RBP16.28■□□□□ 0.2
CCDC144NL-AS1-218ENST00000583962 A0A0U1RQG5 324 aaPredicted RBP16.26■□□□□ 0.19
CCDC144NL-AS1-218ENST00000583962 WIZO95785 1651 aa16.26■□□□□ 0.19
CCDC144NL-AS1-218ENST00000583962 NESP48681 1621 aa16.25■□□□□ 0.19
CCDC144NL-AS1-218ENST00000583962 PDS5BQ9NTI5 1447 aa16.18■□□□□ 0.18
CCDC144NL-AS1-218ENST00000583962 CADPSQ9ULU8 1353 aa16.18■□□□□ 0.18
CCDC144NL-AS1-218ENST00000583962 SUPT16HQ9Y5B9 1047 aaKnown RBP16.16■□□□□ 0.18
CCDC144NL-AS1-218ENST00000583962 LAMC3Q9Y6N6 1575 aa16.16■□□□□ 0.18
CCDC144NL-AS1-218ENST00000583962 NEFLP07196 543 aa16.15■□□□□ 0.18
CCDC144NL-AS1-218ENST00000583962 BCANQ96GW7 911 aa16.14■□□□□ 0.17
CCDC144NL-AS1-218ENST00000583962 PDE4CQ08493 712 aa16.12■□□□□ 0.17
CCDC144NL-AS1-218ENST00000583962 CUX2O14529 1486 aa16.12■□□□□ 0.17
CCDC144NL-AS1-218ENST00000583962 TOP2AP11388 1531 aaKnown RBP16.11■□□□□ 0.17
CCDC144NL-AS1-218ENST00000583962 ERICH6BQ5W0A0 696 aa16.09■□□□□ 0.17
CCDC144NL-AS1-218ENST00000583962 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.08■□□□□ 0.16
CCDC144NL-AS1-218ENST00000583962 CCER1Q8TC90 406 aaPredicted RBP16.07■□□□□ 0.16
CCDC144NL-AS1-218ENST00000583962 KLHL34Q8N239 644 aa16.05■□□□□ 0.16
CCDC144NL-AS1-218ENST00000583962 RBM19Q9Y4C8 960 aaKnown RBP16.03■□□□□ 0.16
CCDC144NL-AS1-218ENST00000583962 PRDM2Q13029 1718 aa16.02■□□□□ 0.16
CCDC144NL-AS1-218ENST00000583962 IL27Q8NEV9 243 aa16.02■□□□□ 0.16
CCDC144NL-AS1-218ENST00000583962 PDIA4P13667 645 aaKnown RBP16.02■□□□□ 0.15
CCDC144NL-AS1-218ENST00000583962 VSIG10Q8N0Z9 540 aa16■□□□□ 0.15
CCDC144NL-AS1-218ENST00000583962 MYT1LQ9UL68 1186 aa15.98■□□□□ 0.15
CCDC144NL-AS1-218ENST00000583962 CFTRP13569 1480 aa15.98■□□□□ 0.15
CCDC144NL-AS1-218ENST00000583962 GLIPR1L2Q4G1C9 344 aa15.98■□□□□ 0.15
CCDC144NL-AS1-218ENST00000583962 TIMELESSQ9UNS1 1208 aa15.98■□□□□ 0.15
CCDC144NL-AS1-218ENST00000583962 CEP164Q9UPV0 1460 aa15.98■□□□□ 0.15
CCDC144NL-AS1-218ENST00000583962 FANCD2Q9BXW9 1451 aa15.97■□□□□ 0.15
CCDC144NL-AS1-218ENST00000583962 NBR1Q14596 966 aa15.97■□□□□ 0.15
CCDC144NL-AS1-218ENST00000583962 CCDC88BA6NC98 1476 aa15.96■□□□□ 0.15
CCDC144NL-AS1-218ENST00000583962 MRC2Q9UBG0 1479 aa15.96■□□□□ 0.14
CCDC144NL-AS1-218ENST00000583962 RANGAP1P46060 587 aaPredicted RBP15.95■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms