RNA–Protein interactions for RNA: ENST00000581305.1

RPL17-211, Transcript of ribosomal protein L17, humanhuman

TSL 5

Gene RPL17, Length 593 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL17-211ENST00000581305 FANCD2Q9BXW9 1451 aa17.45■□□□□ 0.38
RPL17-211ENST00000581305 REM2Q8IYK8 340 aaPredicted RBP17.44■□□□□ 0.38
RPL17-211ENST00000581305 RSF1Q96T23 1441 aaPredicted RBP17.44■□□□□ 0.38
RPL17-211ENST00000581305 SUPT5HO00267 1087 aaKnown RBP17.4■□□□□ 0.38
RPL17-211ENST00000581305 CFTRP13569 1480 aa17.38■□□□□ 0.37
RPL17-211ENST00000581305 FKBP8Q14318 412 aa17.37■□□□□ 0.37
RPL17-211ENST00000581305 URB2Q14146 1524 aaKnown RBP17.35■□□□□ 0.37
RPL17-211ENST00000581305 RIMBP3CA6NJZ7 1639 aa17.29■□□□□ 0.36
RPL17-211ENST00000581305 RIMBP3BA6NNM3 1639 aa17.29■□□□□ 0.36
RPL17-211ENST00000581305 RIMBP3Q9UFD9 1639 aa17.29■□□□□ 0.36
RPL17-211ENST00000581305 PITPNM1O00562 1244 aa17.25■□□□□ 0.35
RPL17-211ENST00000581305 CLEC11AQ9Y240 323 aa17.24■□□□□ 0.35
RPL17-211ENST00000581305 TOP2AP11388 1531 aaKnown RBP17.22■□□□□ 0.35
RPL17-211ENST00000581305 CHRDL2Q6WN34 429 aa17.21■□□□□ 0.35
RPL17-211ENST00000581305 SPDYE1Q8NFV5 336 aaPredicted RBP17.21■□□□□ 0.35
RPL17-211ENST00000581305 ARHGEF11O15085 1522 aa17.21■□□□□ 0.34
RPL17-211ENST00000581305 ZNF608Q9ULD9 1512 aaPredicted RBP17.2■□□□□ 0.34
RPL17-211ENST00000581305 IFT140Q96RY7 1462 aa17.16■□□□□ 0.34
RPL17-211ENST00000581305 PRDM2Q13029 1718 aa17.15■□□□□ 0.34
RPL17-211ENST00000581305 PROM2Q8N271 834 aa17.1■□□□□ 0.33
RPL17-211ENST00000581305 TOPBP1Q92547 1522 aa17.09■□□□□ 0.33
RPL17-211ENST00000581305 EIF4G3O43432 1585 aaKnown RBP17.07■□□□□ 0.32
RPL17-211ENST00000581305 CYB5RLQ6IPT4 315 aa17.07■□□□□ 0.32
RPL17-211ENST00000581305 CCDC88BA6NC98 1476 aa17.03■□□□□ 0.32
RPL17-211ENST00000581305 ARAP1Q96P48 1450 aa17.02■□□□□ 0.32
RPL17-211ENST00000581305 PRR29P0C7W0 189 aa17.01■□□□□ 0.31
RPL17-211ENST00000581305 CHD1O14646 1710 aa17■□□□□ 0.31
RPL17-211ENST00000581305 STAG3Q9UJ98 1225 aa17■□□□□ 0.31
RPL17-211ENST00000581305 ABCC8Q09428 1581 aa16.98■□□□□ 0.31
RPL17-211ENST00000581305 DNMBPQ6XZF7 1577 aa16.98■□□□□ 0.31
RPL17-211ENST00000581305 AQRO60306 1485 aaKnown RBP eCLIP16.98■□□□□ 0.315e-7■■■■■ 40.8
RPL17-211ENST00000581305 TARBP1Q13395 1621 aaKnown RBP16.97■□□□□ 0.31
RPL17-211ENST00000581305 PIP4P2Q8N4L2 257 aa16.95■□□□□ 0.3
RPL17-211ENST00000581305 FXR2P51116 673 aaKnown RBP eCLIP16.93■□□□□ 0.3
RPL17-211ENST00000581305 POTEHQ6S545 545 aa16.91■□□□□ 0.3
RPL17-211ENST00000581305 POLA1P09884 1462 aaPredicted RBP16.9■□□□□ 0.3
RPL17-211ENST00000581305 PRKAR2AP13861 404 aaKnown RBP16.84■□□□□ 0.29
RPL17-211ENST00000581305 RAD54L2Q9Y4B4 1467 aa16.84■□□□□ 0.29
RPL17-211ENST00000581305 CHADLQ6NUI6 762 aa16.83■□□□□ 0.28
RPL17-211ENST00000581305 CLASP1Q7Z460 1538 aa16.82■□□□□ 0.28
RPL17-211ENST00000581305 TDRD9Q8NDG6 1382 aaKnown RBP16.81■□□□□ 0.28
RPL17-211ENST00000581305 SNAPC4Q5SXM2 1469 aa16.8■□□□□ 0.28
RPL17-211ENST00000581305 SOGA1O94964 1423 aa16.79■□□□□ 0.28
RPL17-211ENST00000581305 WDR97A6NE52 1622 aa16.74■□□□□ 0.27
RPL17-211ENST00000581305 SYNJ1O43426 1573 aa16.74■□□□□ 0.27
RPL17-211ENST00000581305 FBXO3Q9UK99 471 aa16.74■□□□□ 0.27
RPL17-211ENST00000581305 FGD5Q6ZNL6 1462 aa16.73■□□□□ 0.27
RPL17-211ENST00000581305 MAGI1Q96QZ7 1491 aaPredicted RBP16.73■□□□□ 0.27
RPL17-211ENST00000581305 CHMP7Q8WUX9 453 aaPredicted RBP16.72■□□□□ 0.27
RPL17-211ENST00000581305 CREBZFQ9NS37 354 aa16.71■□□□□ 0.27
RPL17-211ENST00000581305 SYNJ2O15056 1496 aa16.68■□□□□ 0.26
RPL17-211ENST00000581305 GRIN2BQ13224 1484 aa16.68■□□□□ 0.26
RPL17-211ENST00000581305 MIER1Q8N108 512 aa16.67■□□□□ 0.26
RPL17-211ENST00000581305 CUX1P39880 1505 aa16.66■□□□□ 0.26
RPL17-211ENST00000581305 GAPVD1Q14C86 1478 aa16.66■□□□□ 0.26
RPL17-211ENST00000581305 PLCD3Q8N3E9 789 aa16.62■□□□□ 0.25
RPL17-211ENST00000581305 PBRM1Q86U86 1689 aa16.59■□□□□ 0.25
RPL17-211ENST00000581305 FARP1Q9Y4F1 1045 aaPredicted RBP16.59■□□□□ 0.25
RPL17-211ENST00000581305 PLEKHG5O94827 1062 aa16.56■□□□□ 0.24
RPL17-211ENST00000581305 VASPP50552 380 aaPredicted RBP16.55■□□□□ 0.24
RPL17-211ENST00000581305 ERCC6L2Q5T890 1561 aa16.55■□□□□ 0.24
RPL17-211ENST00000581305 ABCA5Q8WWZ7 1642 aa16.53■□□□□ 0.24
RPL17-211ENST00000581305 ABCA10Q8WWZ4 1543 aa16.52■□□□□ 0.24
RPL17-211ENST00000581305 HAX1O00165 279 aa16.51■□□□□ 0.23
RPL17-211ENST00000581305 MNX1P50219 401 aaPredicted RBP16.49■□□□□ 0.23
RPL17-211ENST00000581305 WRNQ14191 1432 aaPredicted RBP eCLIP16.49■□□□□ 0.238e-7■■□□□ 13.9
RPL17-211ENST00000581305 GRIN2AQ12879 1464 aa16.48■□□□□ 0.23
RPL17-211ENST00000581305 CEP170Q5SW79 1584 aa16.47■□□□□ 0.23
RPL17-211ENST00000581305 NUP160Q12769 1436 aa16.45■□□□□ 0.22
RPL17-211ENST00000581305 ADAMTS12P58397 1594 aa16.43■□□□□ 0.22
RPL17-211ENST00000581305 SHROOM2Q13796 1616 aa16.42■□□□□ 0.22
RPL17-211ENST00000581305 NPM1P06748 294 aaKnown RBP eCLIP16.42■□□□□ 0.22
RPL17-211ENST00000581305 KIF13AQ9H1H9 1805 aa16.4■□□□□ 0.22
RPL17-211ENST00000581305 KLHL34Q8N239 644 aa16.38■□□□□ 0.21
RPL17-211ENST00000581305 C19orf67A6NJJ6 358 aa16.37■□□□□ 0.21
RPL17-211ENST00000581305 ZBTB47Q9UFB7 747 aaPredicted RBP16.37■□□□□ 0.21
RPL17-211ENST00000581305 FHAD1B1AJZ9 1412 aa16.36■□□□□ 0.21
RPL17-211ENST00000581305 EVX2Q03828 476 aa16.35■□□□□ 0.21
RPL17-211ENST00000581305 CD44P16070 742 aaKnown RBP16.34■□□□□ 0.21
RPL17-211ENST00000581305 TOP2BQ02880 1626 aa16.34■□□□□ 0.21
RPL17-211ENST00000581305 IFNLR1Q8IU57 520 aaPredicted RBP16.32■□□□□ 0.2
RPL17-211ENST00000581305 PRG4Q92954 1404 aaPredicted RBP16.3■□□□□ 0.2
RPL17-211ENST00000581305 BIVM-ERCC5R4GMW8 1640 aa16.29■□□□□ 0.2
RPL17-211ENST00000581305 ERICH3Q5RHP9 1530 aa16.29■□□□□ 0.2
RPL17-211ENST00000581305 ABCC10Q5T3U5 1492 aa16.27■□□□□ 0.19
RPL17-211ENST00000581305 FAM69CQ0P6D2 419 aa16.25■□□□□ 0.19
RPL17-211ENST00000581305 JPH4Q96JJ6 628 aa16.25■□□□□ 0.19
RPL17-211ENST00000581305 DIP2BQ9P265 1576 aa16.23■□□□□ 0.19
RPL17-211ENST00000581305 ZRANB1Q9UGI0 708 aa16.23■□□□□ 0.19
RPL17-211ENST00000581305 MAPKBP1O60336 1514 aa16.23■□□□□ 0.19
RPL17-211ENST00000581305 PAK3O75914 559 aaPredicted RBP16.22■□□□□ 0.19
RPL17-211ENST00000581305 RASEFQ8IZ41 740 aa16.22■□□□□ 0.19
RPL17-211ENST00000581305 TSPYL2Q9H2G4 693 aaPredicted RBP16.22■□□□□ 0.19
RPL17-211ENST00000581305 RUSC2Q8N2Y8 1516 aa16.22■□□□□ 0.19
RPL17-211ENST00000581305 EEA1Q15075 1411 aa16.2■□□□□ 0.18
RPL17-211ENST00000581305 KDM4FA0A1W2PPD8 638 aa16.2■□□□□ 0.18
RPL17-211ENST00000581305 NUBP1P53384 320 aa16.2■□□□□ 0.18
RPL17-211ENST00000581305 ADCY10Q96PN6 1610 aa16.19■□□□□ 0.18
RPL17-211ENST00000581305 KIF27Q86VH2 1401 aa16.18■□□□□ 0.18
RPL17-211ENST00000581305 KDM6BO15054 1643 aa16.16■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 106 ms