RNA–Protein interactions for RNA: ENST00000577706.1

TOP2A-203, Transcript of DNA topoisomerase II alpha, humanhuman

TSL 2

Gene TOP2A, Length 554 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP2A-203ENST00000577706 OTUD5Q96G74 571 aa12.27□□□□□ -0.45
TOP2A-203ENST00000577706 CCDC61Q9Y6R9 512 aa12.27□□□□□ -0.45
TOP2A-203ENST00000577706 ATMINO43313 823 aaPredicted RBP12.24□□□□□ -0.45
TOP2A-203ENST00000577706 SLC39A7Q92504 469 aa12.23□□□□□ -0.45
TOP2A-203ENST00000577706 C7P10643 843 aa12.21□□□□□ -0.45
TOP2A-203ENST00000577706 METRNQ9UJH8 293 aa12.21□□□□□ -0.45
TOP2A-203ENST00000577706 KIF12Q96FN5 646 aa12.2□□□□□ -0.46
TOP2A-203ENST00000577706 PLCD3Q8N3E9 789 aa12.17□□□□□ -0.46
TOP2A-203ENST00000577706 RASEFQ8IZ41 740 aa12.16□□□□□ -0.46
TOP2A-203ENST00000577706 ATN1P54259 1190 aaPredicted RBP12.15□□□□□ -0.46
TOP2A-203ENST00000577706 MAMSTRQ6ZN01 415 aa12.14□□□□□ -0.47
TOP2A-203ENST00000577706 MAP3K13O43283 966 aa12.13□□□□□ -0.47
TOP2A-203ENST00000577706 PLSCR2Q9NRY7 297 aa12.13□□□□□ -0.47
TOP2A-203ENST00000577706 BMP2KQ9NSY1 1161 aaPredicted RBP12.09□□□□□ -0.47
TOP2A-203ENST00000577706 ZBTB47Q9UFB7 747 aaPredicted RBP12.09□□□□□ -0.47
TOP2A-203ENST00000577706 TRPC6Q9Y210 931 aa12.09□□□□□ -0.47
TOP2A-203ENST00000577706 POTEJP0CG39 1038 aa12.08□□□□□ -0.48
TOP2A-203ENST00000577706 TIE1P35590 1138 aa12.07□□□□□ -0.48
TOP2A-203ENST00000577706 POTEMA6NI47 508 aa12.06□□□□□ -0.48
TOP2A-203ENST00000577706 FKBP8Q14318 412 aa12.06□□□□□ -0.48
TOP2A-203ENST00000577706 SCUBE2Q9NQ36 999 aa12.04□□□□□ -0.48
TOP2A-203ENST00000577706 NUBP1P53384 320 aa12.02□□□□□ -0.49
TOP2A-203ENST00000577706 POTEGQ6S5H5 508 aa12.02□□□□□ -0.49
TOP2A-203ENST00000577706 SGIP1Q9BQI5 828 aa12.01□□□□□ -0.49
TOP2A-203ENST00000577706 PCDHB13Q9Y5F0 798 aa12□□□□□ -0.49
TOP2A-203ENST00000577706 POTEFA5A3E0 1075 aa11.99□□□□□ -0.49
TOP2A-203ENST00000577706 TTLL13PA6NNM8 815 aa11.99□□□□□ -0.49
TOP2A-203ENST00000577706 PCDH10Q9P2E7 1040 aa11.99□□□□□ -0.49
TOP2A-203ENST00000577706 FAM212AQ96EL1 285 aa11.96□□□□□ -0.49
TOP2A-203ENST00000577706 SEC24BO95487 1268 aa11.95□□□□□ -0.5
TOP2A-203ENST00000577706 TRIM35Q9UPQ4 493 aa11.93□□□□□ -0.5
TOP2A-203ENST00000577706 COLQQ9Y215 455 aaPredicted RBP11.92□□□□□ -0.5
TOP2A-203ENST00000577706 IER5LQ5T953 404 aa11.91□□□□□ -0.5
TOP2A-203ENST00000577706 IFNL1Q8IU54 200 aa11.91□□□□□ -0.5
TOP2A-203ENST00000577706 FAM163AQ96GL9 167 aaPredicted RBP11.88□□□□□ -0.51
TOP2A-203ENST00000577706 FBXO3Q9UK99 471 aa11.88□□□□□ -0.51
TOP2A-203ENST00000577706 DCAF8Q5TAQ9 597 aa11.86□□□□□ -0.51
TOP2A-203ENST00000577706 TMEM106CQ9BVX2 250 aa11.85□□□□□ -0.51
TOP2A-203ENST00000577706 LCE2DQ5TA82 110 aaPredicted RBP11.83□□□□□ -0.52
TOP2A-203ENST00000577706 PYGBP11216 843 aa11.8□□□□□ -0.52
TOP2A-203ENST00000577706 PLCG2P16885 1265 aa11.77□□□□□ -0.53
TOP2A-203ENST00000577706 KLHL34Q8N239 644 aa11.74□□□□□ -0.53
TOP2A-203ENST00000577706 IRX5P78411 483 aaPredicted RBP11.73□□□□□ -0.53
TOP2A-203ENST00000577706 PCDHB8Q9UN66 801 aa11.73□□□□□ -0.53
TOP2A-203ENST00000577706 SLAIN1Q8ND83 568 aa11.72□□□□□ -0.53
TOP2A-203ENST00000577706 VASPP50552 380 aaPredicted RBP11.71□□□□□ -0.53
TOP2A-203ENST00000577706 GSE1Q14687 1217 aa11.69□□□□□ -0.54
TOP2A-203ENST00000577706 OCEL1Q9H607 264 aa11.69□□□□□ -0.54
TOP2A-203ENST00000577706 ZNF467Q7Z7K2 595 aaPredicted RBP11.64□□□□□ -0.55
TOP2A-203ENST00000577706 ST18O60284 1047 aa11.6□□□□□ -0.55
TOP2A-203ENST00000577706 CHRM1P11229 460 aaPredicted RBP11.6□□□□□ -0.55
TOP2A-203ENST00000577706 CDAN1Q8IWY9 1227 aa11.6□□□□□ -0.55
TOP2A-203ENST00000577706 GOLGA2Q08379 1002 aa11.58□□□□□ -0.56
TOP2A-203ENST00000577706 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.58□□□□□ -0.56
TOP2A-203ENST00000577706 SNPHO15079 494 aa11.56□□□□□ -0.56
TOP2A-203ENST00000577706 MKRN3Q13064 507 aaKnown RBP11.56□□□□□ -0.56
TOP2A-203ENST00000577706 TMEM121BQ9BXQ6 578 aaPredicted RBP11.55□□□□□ -0.56
TOP2A-203ENST00000577706 PSEN1P49768 467 aa11.53□□□□□ -0.56
TOP2A-203ENST00000577706 PDCD7Q8N8D1 485 aaKnown RBP11.52□□□□□ -0.57
TOP2A-203ENST00000577706 SPOCK2Q92563 424 aa11.51□□□□□ -0.57
TOP2A-203ENST00000577706 L3MBTL3Q96JM7 780 aaPredicted RBP11.5□□□□□ -0.57
TOP2A-203ENST00000577706 IFNLR1Q8IU57 520 aaPredicted RBP11.49□□□□□ -0.57
TOP2A-203ENST00000577706 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.49□□□□□ -0.574e-15■■■■■ 27.8
TOP2A-203ENST00000577706 CIZ1Q9ULV3 898 aaPredicted RBP11.49□□□□□ -0.57
TOP2A-203ENST00000577706 C3orf67Q6ZVT6 689 aa11.48□□□□□ -0.57
TOP2A-203ENST00000577706 PDAP1Q13442 181 aaKnown RBP11.47□□□□□ -0.57
TOP2A-203ENST00000577706 ILDR1Q86SU0 546 aaPredicted RBP11.4□□□□□ -0.58
TOP2A-203ENST00000577706 MARVELD3Q96A59 401 aa11.4□□□□□ -0.58
TOP2A-203ENST00000577706 CABP2Q9NPB3 220 aa11.4□□□□□ -0.58
TOP2A-203ENST00000577706 DPY19L2Q6NUT2 758 aa11.36□□□□□ -0.59
TOP2A-203ENST00000577706 G3V3G9 751 aa11.34□□□□□ -0.59
TOP2A-203ENST00000577706 SPNS2Q8IVW8 549 aa11.32□□□□□ -0.6
TOP2A-203ENST00000577706 BOLA1Q9Y3E2 137 aa11.32□□□□□ -0.6
TOP2A-203ENST00000577706 EMP3P54852 163 aa11.31□□□□□ -0.6
TOP2A-203ENST00000577706 MMRN1Q13201 1228 aa11.31□□□□□ -0.6
TOP2A-203ENST00000577706 TRIM41Q8WV44 630 aa11.31□□□□□ -0.6
TOP2A-203ENST00000577706 FAM205CA6NFA0 338 aa11.24□□□□□ -0.61
TOP2A-203ENST00000577706 EFCAB3Q8N7B9 438 aa11.24□□□□□ -0.61
TOP2A-203ENST00000577706 HS3ST6Q96QI5 342 aa11.23□□□□□ -0.61
TOP2A-203ENST00000577706 POTEB3A0JP26 581 aa11.2□□□□□ -0.62
TOP2A-203ENST00000577706 POTEBQ6S5H4 581 aa11.2□□□□□ -0.62
TOP2A-203ENST00000577706 HOXB3P14651 431 aaPredicted RBP11.19□□□□□ -0.62
TOP2A-203ENST00000577706 ZNF710Q8N1W2 664 aa11.18□□□□□ -0.62
TOP2A-203ENST00000577706 RIOK3O14730 519 aaKnown RBP11.16□□□□□ -0.62
TOP2A-203ENST00000577706 KRTAP3-3Q9BYR6 98 aa11.16□□□□□ -0.62
TOP2A-203ENST00000577706 KRTAP3-2Q9BYR7 98 aa11.16□□□□□ -0.62
TOP2A-203ENST00000577706 DOK7Q18PE1 504 aa11.15□□□□□ -0.62
TOP2A-203ENST00000577706 SOX12O15370 315 aa11.14□□□□□ -0.63
TOP2A-203ENST00000577706 HOXB1P14653 301 aaPredicted RBP11.14□□□□□ -0.63
TOP2A-203ENST00000577706 RNF25Q96BH1 459 aaPredicted RBP11.13□□□□□ -0.63
TOP2A-203ENST00000577706 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.12□□□□□ -0.63
TOP2A-203ENST00000577706 VGFO15240 615 aaPredicted RBP11.12□□□□□ -0.63
TOP2A-203ENST00000577706 MICALL2Q8IY33 904 aa11.12□□□□□ -0.63
TOP2A-203ENST00000577706 ZFP91Q96JP5 570 aaPredicted RBP11.12□□□□□ -0.63
TOP2A-203ENST00000577706 RIMBP2O15034 1052 aa11.11□□□□□ -0.63
TOP2A-203ENST00000577706 ERBB3P21860 1342 aa11.09□□□□□ -0.63
TOP2A-203ENST00000577706 TMEM92Q6UXU6 159 aa11.07□□□□□ -0.64
TOP2A-203ENST00000577706 MS4A4AQ96JQ5 239 aa11.07□□□□□ -0.64
TOP2A-203ENST00000577706 PHF8Q9UPP1 1060 aa11.07□□□□□ -0.64
TOP2A-203ENST00000577706 ZSWIM6Q9HCJ5 1215 aa11.03□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms