RNA–Protein interactions for RNA: ENST00000576222.1

PCDHGB3-201, Transcript of protocadherin gamma subfamily B, 3, humanhuman

TSL 1 (best) BASIC

Gene PCDHGB3, Length 4,727 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB3-201ENST00000576222 DDRGK1Q96HY6 314 aa17.52■□□□□ 0.39
PCDHGB3-201ENST00000576222 RTN4Q9NQC3 1192 aaKnown RBP17.52■□□□□ 0.39
PCDHGB3-201ENST00000576222 UPF2Q9HAU5 1272 aaKnown RBP17.52■□□□□ 0.39
PCDHGB3-201ENST00000576222 CECR2Q9BXF3 1484 aa17.51■□□□□ 0.39
PCDHGB3-201ENST00000576222 CCNB3Q8WWL7 1395 aa17.51■□□□□ 0.39
PCDHGB3-201ENST00000576222 MTUS2Q5JR59 1369 aa17.51■□□□□ 0.39
PCDHGB3-201ENST00000576222 PPM1GO15355 546 aaPredicted RBP17.5■□□□□ 0.39
PCDHGB3-201ENST00000576222 VPS8Q8N3P4 1428 aa17.5■□□□□ 0.39
PCDHGB3-201ENST00000576222 ZNF777Q9ULD5 760 aaPredicted RBP17.5■□□□□ 0.39
PCDHGB3-201ENST00000576222 TIMELESSQ9UNS1 1208 aa17.49■□□□□ 0.39
PCDHGB3-201ENST00000576222 NEFMP07197 916 aa17.48■□□□□ 0.39
PCDHGB3-201ENST00000576222 GOLGA6L2Q8N9W4 650 aaPredicted RBP17.47■□□□□ 0.39
PCDHGB3-201ENST00000576222 LAS1LQ9Y4W2 734 aaKnown RBP17.47■□□□□ 0.39
PCDHGB3-201ENST00000576222 RRP7BPQ9NSQ0 103 aa17.46■□□□□ 0.38
PCDHGB3-201ENST00000576222 ARXQ96QS3 562 aa17.45■□□□□ 0.38
PCDHGB3-201ENST00000576222 SENP3-EIF4A1A0A087X0R7 540 aa17.45■□□□□ 0.38
PCDHGB3-201ENST00000576222 ANP32BQ92688 251 aaKnown RBP17.44■□□□□ 0.38
PCDHGB3-201ENST00000576222 ERICH6BQ5W0A0 696 aa17.44■□□□□ 0.38
PCDHGB3-201ENST00000576222 CCDC88BA6NC98 1476 aa17.43■□□□□ 0.38
PCDHGB3-201ENST00000576222 KCNH8Q96L42 1107 aa17.4■□□□□ 0.38
PCDHGB3-201ENST00000576222 KANK4Q5T7N3 995 aaPredicted RBP17.39■□□□□ 0.37
PCDHGB3-201ENST00000576222 HSP90AA1P07900 732 aaKnown RBP17.39■□□□□ 0.37
PCDHGB3-201ENST00000576222 ABCC8Q09428 1581 aa17.37■□□□□ 0.37
PCDHGB3-201ENST00000576222 KDM2AQ9Y2K7 1162 aa17.36■□□□□ 0.37
PCDHGB3-201ENST00000576222 BAZ1AQ9NRL2 1556 aaPredicted RBP17.35■□□□□ 0.37
PCDHGB3-201ENST00000576222 SETD5Q9C0A6 1442 aa17.35■□□□□ 0.37
PCDHGB3-201ENST00000576222 WDR43Q15061 677 aaKnown RBP eCLIP17.35■□□□□ 0.37
PCDHGB3-201ENST00000576222 MROH2BQ7Z745 1585 aa17.35■□□□□ 0.37
PCDHGB3-201ENST00000576222 KIF27Q86VH2 1401 aa17.33■□□□□ 0.36
PCDHGB3-201ENST00000576222 DHX57Q6P158 1386 aaKnown RBP17.32■□□□□ 0.36
PCDHGB3-201ENST00000576222 BECN1Q14457 450 aa17.32■□□□□ 0.36
PCDHGB3-201ENST00000576222 RAB3GAP2Q9H2M9 1393 aa17.32■□□□□ 0.36
PCDHGB3-201ENST00000576222 PPP1R15AO75807 674 aaPredicted RBP17.28■□□□□ 0.36
PCDHGB3-201ENST00000576222 FBLN2P98095 1184 aa17.28■□□□□ 0.36
PCDHGB3-201ENST00000576222 NACADO15069 1562 aa17.27■□□□□ 0.36
PCDHGB3-201ENST00000576222 HSPA5P11021 654 aaKnown RBP17.26■□□□□ 0.35
PCDHGB3-201ENST00000576222 FANCIQ9NVI1 1328 aa17.25■□□□□ 0.35
PCDHGB3-201ENST00000576222 IPO9Q96P70 1041 aaKnown RBP17.23■□□□□ 0.35
PCDHGB3-201ENST00000576222 TRIM44Q96DX7 344 aaPredicted RBP17.2■□□□□ 0.34
PCDHGB3-201ENST00000576222 RGS3P49796 1198 aa17.19■□□□□ 0.34
PCDHGB3-201ENST00000576222 TSPY4P0CV99 314 aa17.18■□□□□ 0.34
PCDHGB3-201ENST00000576222 TSPY10P0CW01 314 aa17.18■□□□□ 0.34
PCDHGB3-201ENST00000576222 CARD11Q9BXL7 1154 aa17.18■□□□□ 0.34
PCDHGB3-201ENST00000576222 FHAD1B1AJZ9 1412 aa17.17■□□□□ 0.34
PCDHGB3-201ENST00000576222 NAP1L5Q96NT1 182 aaPredicted RBP17.16■□□□□ 0.34
PCDHGB3-201ENST00000576222 BAZ1BQ9UIG0 1483 aaKnown RBP17.16■□□□□ 0.34
PCDHGB3-201ENST00000576222 TCERG1O14776 1098 aaKnown RBP17.15■□□□□ 0.34
PCDHGB3-201ENST00000576222 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.14■□□□□ 0.33
PCDHGB3-201ENST00000576222 ZBTB4Q9P1Z0 1013 aaPredicted RBP17.14■□□□□ 0.33
PCDHGB3-201ENST00000576222 WIZO95785 1651 aa17.12■□□□□ 0.33
PCDHGB3-201ENST00000576222 RUSC2Q8N2Y8 1516 aa17.11■□□□□ 0.33
PCDHGB3-201ENST00000576222 NUDCQ9Y266 331 aa17.1■□□□□ 0.33
PCDHGB3-201ENST00000576222 RGL3Q3MIN7 710 aa17.07■□□□□ 0.32
PCDHGB3-201ENST00000576222 RAPGEF2Q9Y4G8 1499 aa17.06■□□□□ 0.32
PCDHGB3-201ENST00000576222 ARHGAP35Q9NRY4 1499 aa17.06■□□□□ 0.32
PCDHGB3-201ENST00000576222 RCAN3Q9UKA8 241 aa17.06■□□□□ 0.32
PCDHGB3-201ENST00000576222 CARMIL1Q5VZK9 1371 aa17.05■□□□□ 0.32
PCDHGB3-201ENST00000576222 KNSTRNQ9Y448 316 aa17.05■□□□□ 0.32
PCDHGB3-201ENST00000576222 GOLGA6L22H0YM25 854 aa17.04■□□□□ 0.32
PCDHGB3-201ENST00000576222 L1TD1Q5T7N2 865 aaKnown RBP17.04■□□□□ 0.32
PCDHGB3-201ENST00000576222 USP35Q9P2H5 1018 aa17.04■□□□□ 0.32
PCDHGB3-201ENST00000576222 TOP2AP11388 1531 aaKnown RBP17.01■□□□□ 0.31
PCDHGB3-201ENST00000576222 CC2D1BQ5T0F9 858 aaKnown RBP17.01■□□□□ 0.31
PCDHGB3-201ENST00000576222 CHGAP10645 457 aaKnown RBP17.01■□□□□ 0.31
PCDHGB3-201ENST00000576222 CFDP1Q9UEE9 299 aaPredicted RBP17■□□□□ 0.31
PCDHGB3-201ENST00000576222 FOXD1Q16676 465 aa16.99■□□□□ 0.31
PCDHGB3-201ENST00000576222 ZBED9Q6R2W3 1325 aa16.98■□□□□ 0.31
PCDHGB3-201ENST00000576222 CUX2O14529 1486 aa16.98■□□□□ 0.31
PCDHGB3-201ENST00000576222 PRKRIP1Q9H875 184 aaPredicted RBP16.97■□□□□ 0.31
PCDHGB3-201ENST00000576222 SLC24A1O60721 1099 aa16.97■□□□□ 0.31
PCDHGB3-201ENST00000576222 L3MBTL2Q969R5 705 aa16.97■□□□□ 0.31
PCDHGB3-201ENST00000576222 MPHOSPH9Q99550 1183 aa16.96■□□□□ 0.31
PCDHGB3-201ENST00000576222 CDCA8Q53HL2 280 aa16.96■□□□□ 0.31
PCDHGB3-201ENST00000576222 NCLP19338 710 aaKnown RBP16.95■□□□□ 0.3
PCDHGB3-201ENST00000576222 FRAT1Q92837 279 aaPredicted RBP16.95■□□□□ 0.3
PCDHGB3-201ENST00000576222 PDE4AP27815 886 aa16.94■□□□□ 0.3
PCDHGB3-201ENST00000576222 MYH16Q9H6N6 1097 aa16.93■□□□□ 0.3
PCDHGB3-201ENST00000576222 FMN1Q68DA7 1419 aa16.93■□□□□ 0.3
PCDHGB3-201ENST00000576222 NEUROD2Q15784 382 aa16.92■□□□□ 0.3
PCDHGB3-201ENST00000576222 RALBP1Q15311 655 aa16.92■□□□□ 0.3
PCDHGB3-201ENST00000576222 DCAF11Q8TEB1 546 aa16.92■□□□□ 0.3
PCDHGB3-201ENST00000576222 FTSJ3Q8IY81 847 aaKnown RBP16.92■□□□□ 0.3
PCDHGB3-201ENST00000576222 PNNQ9H307 717 aaKnown RBP16.9■□□□□ 0.3
PCDHGB3-201ENST00000576222 GSE1Q14687 1217 aa16.9■□□□□ 0.3
PCDHGB3-201ENST00000576222 SLKQ9H2G2 1235 aaPredicted RBP16.89■□□□□ 0.3
PCDHGB3-201ENST00000576222 KTN1Q86UP2 1357 aaKnown RBP16.89■□□□□ 0.29
PCDHGB3-201ENST00000576222 PLEKHD1A6NEE1 506 aa16.88■□□□□ 0.29
PCDHGB3-201ENST00000576222 PDE3BQ13370 1112 aa16.88■□□□□ 0.29
PCDHGB3-201ENST00000576222 PTMAP06454 111 aaKnown RBP16.87■□□□□ 0.29
PCDHGB3-201ENST00000576222 TNNT2P45379 298 aaPredicted RBP16.87■□□□□ 0.29
PCDHGB3-201ENST00000576222 SPRYD3Q8NCJ5 442 aa16.87■□□□□ 0.29
PCDHGB3-201ENST00000576222 TMF1P82094 1093 aa16.86■□□□□ 0.29
PCDHGB3-201ENST00000576222 CFAP53Q96M91 514 aa16.86■□□□□ 0.29
PCDHGB3-201ENST00000576222 HSP90AB1P08238 724 aaKnown RBP16.85■□□□□ 0.29
PCDHGB3-201ENST00000576222 EXOC6Q8TAG9 804 aa16.85■□□□□ 0.29
PCDHGB3-201ENST00000576222 HSCBQ8IWL3 235 aa16.85■□□□□ 0.29
PCDHGB3-201ENST00000576222 DNTTIP2Q5QJE6 756 aaKnown RBP16.84■□□□□ 0.29
PCDHGB3-201ENST00000576222 PKD2Q13563 968 aa16.84■□□□□ 0.29
PCDHGB3-201ENST00000576222 GZF1Q9H116 711 aaPredicted RBP16.84■□□□□ 0.29
PCDHGB3-201ENST00000576222 RSPH6AQ9H0K4 717 aa16.83■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 64.2 ms